Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26k12
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-957|AAN12120.1|  201|Drosophila melanogaster CG32422-PA...    29   4.3  
AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p pro...    29   7.6  
AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.1...    29   7.6  
AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA ...    29   7.6  

>AE014296-957|AAN12120.1|  201|Drosophila melanogaster CG32422-PA
           protein.
          Length = 201

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 379 TYSDDT-IRFYHTLQKATVSNSFSFRHVYKKKSKFQGQTMSIFGKSMFFSWA 531
           ++SDD  +RF     KA + NS+ F  +   K  F G T +++G S   +W+
Sbjct: 49  SFSDDLRLRFSGRANKAAI-NSYLFAVMSTYKDPFPGWTDNLYGPSGLCTWS 99


>AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p
           protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +1

Query: 406 YHTLQKATVSNSFSFRHVYKKKSKFQGQTMSIF 504
           ++ LQ+  +S  F FR VY+ + +F GQ+ ++F
Sbjct: 91  HNQLQQVRISEQF-FREVYELERRFYGQSCALF 122


>AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.18
           protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +1

Query: 406 YHTLQKATVSNSFSFRHVYKKKSKFQGQTMSIF 504
           ++ LQ+  +S  F FR VY+ + +F GQ+ ++F
Sbjct: 91  HNQLQQVRISEQF-FREVYELERRFYGQSCALF 122


>AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA
           protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +1

Query: 406 YHTLQKATVSNSFSFRHVYKKKSKFQGQTMSIF 504
           ++ LQ+  +S  F FR VY+ + +F GQ+ ++F
Sbjct: 91  HNQLQQVRISEQF-FREVYELERRFYGQSCALF 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,315,364
Number of Sequences: 53049
Number of extensions: 538127
Number of successful extensions: 930
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)