Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26k12
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 65 4e-11
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 65 4e-11
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 65 4e-11
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 65 4e-11
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 64 9e-11
Z81499-1|CAB04087.1| 471|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical p... 29 3.9
Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical p... 29 3.9
Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF022971-9|AAG23978.2| 345|Caenorhabditis elegans Serpentine re... 29 3.9
AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine re... 28 5.2
Z74032-10|CAE17778.2| 339|Caenorhabditis elegans Hypothetical p... 27 9.1
AL117207-14|CAB60394.2| 333|Caenorhabditis elegans Hypothetical... 27 9.1
AF324488-1|AAK49909.1| 314|Caenorhabditis elegans B0212.4-like ... 27 9.1
AF045639-4|AAV58895.1| 313|Caenorhabditis elegans Hypothetical ... 27 9.1
AF045639-3|AAL11098.1| 383|Caenorhabditis elegans Hypothetical ... 27 9.1
AF045639-2|AAC02568.2| 382|Caenorhabditis elegans Hypothetical ... 27 9.1
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical... 27 9.1
>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 65.3 bits (152), Expect = 4e-11
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Frame = +2
Query: 287 GTRLVIKKITGNILEATILAGKFKGKVVLLPRIPMIPSDSTIPF--KRLQFPIRLAFAMS 460
G+R +++ + + L G+ KG ++PRI D I F +R QFP+RL+FA+S
Sbjct: 1245 GSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCY-DDKNISFQLRRTQFPVRLSFALS 1303
Query: 461 IKKSLNFKVKQCP-YLENLCFSHGQLCVACSRVGKPSNLFVLAKDRLTKNIVHRLVL 628
I K+ + ++ F+HGQL VA SRV L V + + NIV VL
Sbjct: 1304 INKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSSNIVTNIVFNEVL 1360
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 65.3 bits (152), Expect = 4e-11
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Frame = +2
Query: 287 GTRLVIKKITGNILEATILAGKFKGKVVLLPRIPMIPSDSTIPF--KRLQFPIRLAFAMS 460
G+R +++ + + L G+ KG ++PRI D I F +R QFP+RL+FA+S
Sbjct: 1351 GSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCY-DDKNISFQLRRTQFPVRLSFALS 1409
Query: 461 IKKSLNFKVKQCP-YLENLCFSHGQLCVACSRVGKPSNLFVLAKDRLTKNIVHRLVL 628
I K+ + ++ F+HGQL VA SRV L V + + NIV VL
Sbjct: 1410 INKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSSNIVTNIVFNEVL 1466
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 65.3 bits (152), Expect = 4e-11
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Frame = +2
Query: 287 GTRLVIKKITGNILEATILAGKFKGKVVLLPRIPMIPSDSTIPF--KRLQFPIRLAFAMS 460
G+R +++ + + L G+ KG ++PRI D I F +R QFP+RL+FA+S
Sbjct: 1351 GSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCY-DDKNISFQLRRTQFPVRLSFALS 1409
Query: 461 IKKSLNFKVKQCP-YLENLCFSHGQLCVACSRVGKPSNLFVLAKDRLTKNIVHRLVL 628
I K+ + ++ F+HGQL VA SRV L V + + NIV VL
Sbjct: 1410 INKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSSNIVTNIVFNEVL 1466
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 65.3 bits (152), Expect = 4e-11
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Frame = +2
Query: 287 GTRLVIKKITGNILEATILAGKFKGKVVLLPRIPMIPSDSTIPF--KRLQFPIRLAFAMS 460
G+R +++ + + L G+ KG ++PRI D I F +R QFP+RL+FA+S
Sbjct: 1371 GSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCY-DDKNISFQLRRTQFPVRLSFALS 1429
Query: 461 IKKSLNFKVKQCP-YLENLCFSHGQLCVACSRVGKPSNLFVLAKDRLTKNIVHRLVL 628
I K+ + ++ F+HGQL VA SRV L V + + NIV VL
Sbjct: 1430 INKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSSNIVTNIVFNEVL 1486
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 64.1 bits (149), Expect = 9e-11
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Frame = +2
Query: 287 GTRLVIKKITGNILEATILAGKFKGKVVLLPRIPMIPSDSTIPF--KRLQFPIRLAFAMS 460
G+R +++ + + L G+ KG ++PRI D I F +R QFP+RL+FA+S
Sbjct: 1250 GSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCY-DDKNISFQLRRTQFPVRLSFALS 1308
Query: 461 IKKSLNFKVKQCP-YLENLCFSHGQLCVACSRVGKPSNLFVLAKDRLTKNIVHRLVL 628
I K+ + ++ F+HGQL VA SRV L V + NIV VL
Sbjct: 1309 INKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKFSSNIVTNIVFNEVL 1365
>Z81499-1|CAB04087.1| 471|Caenorhabditis elegans Hypothetical
protein F11C3.1 protein.
Length = 471
Score = 44.0 bits (99), Expect = 1e-04
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Frame = +2
Query: 287 GTRLVIKKITGNILEATILAGKFKGKVVLLPRIPMIPSDS----TIPFKRLQFPIRLAFA 454
GTRL+ + + GN L ++ GK V + R+ + S LQFP+ L FA
Sbjct: 356 GTRLLFEDLNGNHLCCKVIE---TGKDVDISRVKRLIGSSGKSNNTQQSVLQFPVSLNFA 412
Query: 455 MSIKKSLNFKVKQCP-YLENLCFSHGQLCVACSRVGKPSNLFVLAKDRLTKNIVHRLVL 628
+I S ++ Y N CF HG + A SRV + + V +D + +N + + +L
Sbjct: 413 STIHGSQGKSFEKLGLYKLNECFEHGMIYTAISRVRRFEDYKVFTEDTVIENKIEQSLL 471
>Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1
Query: 495 HCLTLKFRLFFIDM--AKAKRIGNC-SLLKGMVESDGII 388
HCL +F F+I++ + KRIG C +L + ++ GII
Sbjct: 239 HCLAAEFLAFYIEIFSEERKRIGACYALPSSLQDASGII 277
>Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1
Query: 495 HCLTLKFRLFFIDM--AKAKRIGNC-SLLKGMVESDGII 388
HCL +F F+I++ + KRIG C +L + ++ GII
Sbjct: 316 HCLAAEFLAFYIEIFSEERKRIGACYALPSSLQDASGII 354
>Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1
Query: 495 HCLTLKFRLFFIDM--AKAKRIGNC-SLLKGMVESDGII 388
HCL +F F+I++ + KRIG C +L + ++ GII
Sbjct: 239 HCLAAEFLAFYIEIFSEERKRIGACYALPSSLQDASGII 277
>Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1
Query: 495 HCLTLKFRLFFIDM--AKAKRIGNC-SLLKGMVESDGII 388
HCL +F F+I++ + KRIG C +L + ++ GII
Sbjct: 316 HCLAAEFLAFYIEIFSEERKRIGACYALPSSLQDASGII 354
>AF022971-9|AAG23978.2| 345|Caenorhabditis elegans Serpentine
receptor, class h protein38 protein.
Length = 345
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 150 KLHSYFNEDNTVKLILFFTYLC 215
K+H FNE ++ IL+FT+ C
Sbjct: 240 KMHKKFNERTILQAILYFTFCC 261
>AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine
receptor, class h protein37 protein.
Length = 345
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 150 KLHSYFNEDNTVKLILFFTYLC 215
K+H FNE ++ IL+FT+ C
Sbjct: 240 KMHKKFNERTILQSILYFTFCC 261
>Z74032-10|CAE17778.2| 339|Caenorhabditis elegans Hypothetical
protein F35B12.10 protein.
Length = 339
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 370 PAATYSDDTIRFYHTLQKATVSNSFSFRHVY 462
P++ + + + FY L+ +S++FS+RH+Y
Sbjct: 70 PSSHFPNTSASFYSLLKFQPLSSTFSWRHMY 100
>AL117207-14|CAB60394.2| 333|Caenorhabditis elegans Hypothetical
protein Y60A3A.6 protein.
Length = 333
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 359 GKVVLLPRIPMIPSDSTIPFKRLQFPI---RLAFAMSIKKSLNFKVKQ 493
G+V +IP IPSD IPF+ F + L F + + L+F V Q
Sbjct: 163 GRVFTFEKIPCIPSD--IPFRPGYFVLATDNLIFCLCLSLMLSFVVPQ 208
>AF324488-1|AAK49909.1| 314|Caenorhabditis elegans B0212.4-like
protein protein.
Length = 314
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 496 SIFGKSMFFSWATMCCVFTCWETVESICVS 585
++FG MF W+ M + T +V +C+S
Sbjct: 182 AVFGGRMFEGWSNMVWLVTILNSVGGLCIS 211
>AF045639-4|AAV58895.1| 313|Caenorhabditis elegans Hypothetical
protein B0212.4c protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 496 SIFGKSMFFSWATMCCVFTCWETVESICVS 585
++FG MF W+ M + T +V +C+S
Sbjct: 181 AVFGGRMFEGWSNMVWLVTILNSVGGLCIS 210
>AF045639-3|AAL11098.1| 383|Caenorhabditis elegans Hypothetical
protein B0212.4b protein.
Length = 383
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 496 SIFGKSMFFSWATMCCVFTCWETVESICVS 585
++FG MF W+ M + T +V +C+S
Sbjct: 251 AVFGGRMFEGWSNMVWLVTILNSVGGLCIS 280
>AF045639-2|AAC02568.2| 382|Caenorhabditis elegans Hypothetical
protein B0212.4a protein.
Length = 382
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 496 SIFGKSMFFSWATMCCVFTCWETVESICVS 585
++FG MF W+ M + T +V +C+S
Sbjct: 250 AVFGGRMFEGWSNMVWLVTILNSVGGLCIS 279
>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
protein T05H4.3 protein.
Length = 1152
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 434 PIRLAFAMSIKKSL-NFKVKQCPYLENLCFSHG 529
P LA A + SL N K K YLE LC ++G
Sbjct: 2 PNLLATASQVANSLSNLKAKYIKYLETLCSANG 34
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,684,883
Number of Sequences: 27780
Number of extensions: 305540
Number of successful extensions: 620
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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