Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26k02
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical pr... 29 3.3
U23486-6|AAC46778.1| 124|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 29 4.3
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 28 7.5
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 28 7.5
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 9.9
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 9.9
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 9.9
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 9.9
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical
protein C49C8.5 protein.
Length = 451
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = +3
Query: 231 RDHGGVQIG*CGNRSNARCRYSNGGTCSTNKTDED---GCEVRDIYAIRSHGY 380
+ +GG G CGN N +N G CS K D G +R + GY
Sbjct: 368 KGYGGWWYGSCGNNLNGFLYPNNNGDCSVTKFDSTLLLGINMRTTTGTATGGY 420
>U23486-6|AAC46778.1| 124|Caenorhabditis elegans Hypothetical
protein F07F6.5 protein.
Length = 124
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 306 TCSTNKTDEDGCEVRDIYAIRSHGYC-SACAKCCKQISRSQFQGVTPRHS 452
TC N ED +V A R + +C CK ISR F + +HS
Sbjct: 43 TCVFNCLTEDVSKVLSCVATRCNVHCYDGDCPSCKMISRRIFSNICKQHS 92
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/64 (29%), Positives = 24/64 (37%)
Frame = +3
Query: 201 CGTCCHNYDPRDHGGVQIG*CGNRSNARCRYSNGGTCSTNKTDEDGCEVRDIYAIRSHGY 380
CG C N + G CG + +N CS N + GC R Y + GY
Sbjct: 34 CGGCSGN-----NCGCNGNNCGPQVTVVQVPNNNNGCSCNPCNGGGCAPRCSYCPNNFGY 88
Query: 381 CSAC 392
S C
Sbjct: 89 SSCC 92
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 225 DPRDHGGVQIG*CGNRSNARCRYSNGGTCSTNKTDEDGCEVRDIYAIRSHGYC 383
+PR GGV IG GN N C +++T+ +V+ + +++ +C
Sbjct: 2 EPRIDGGVFIGGIGNSGNEMCSNGVPALGVSSQTEIKVEKVQHTWTVKNFSHC 54
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 225 DPRDHGGVQIG*CGNRSNARCRYSNGGTCSTNKTDEDGCEVRDIYAIRSHGYC 383
+PR GGV IG GN N C +++T+ +V+ + +++ +C
Sbjct: 2 EPRIDGGVFIGGIGNSGNEMCSNGVPALGVSSQTEIKVEKVQHTWTVKNFSHC 54
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 168 LNFIREHWSPVCGTCCHNYDP 230
LN +++ W P C TC H P
Sbjct: 584 LNALQKKWHPTCFTCAHCQKP 604
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 168 LNFIREHWSPVCGTCCHNYDP 230
LN +++ W P C TC H P
Sbjct: 1324 LNALQKKWHPTCFTCAHCQKP 1344
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 168 LNFIREHWSPVCGTCCHNYDP 230
LN +++ W P C TC H P
Sbjct: 671 LNALQKKWHPTCFTCAHCQKP 691
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 168 LNFIREHWSPVCGTCCHNYDP 230
LN +++ W P C TC H P
Sbjct: 545 LNALQKKWHPTCFTCAHCQKP 565
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 168 LNFIREHWSPVCGTCCHNYDP 230
LN +++ W P C TC H P
Sbjct: 584 LNALQKKWHPTCFTCAHCQKP 604
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 168 LNFIREHWSPVCGTCCHNYDP 230
LN +++ W P C TC H P
Sbjct: 1324 LNALQKKWHPTCFTCAHCQKP 1344
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 168 LNFIREHWSPVCGTCCHNYDP 230
LN +++ W P C TC H P
Sbjct: 671 LNALQKKWHPTCFTCAHCQKP 691
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 168 LNFIREHWSPVCGTCCHNYDP 230
LN +++ W P C TC H P
Sbjct: 545 LNALQKKWHPTCFTCAHCQKP 565
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,433,388
Number of Sequences: 27780
Number of extensions: 354487
Number of successful extensions: 1023
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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