Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26j24
         (346 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   1.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   1.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   1.8  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   3.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   3.2  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   4.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    21   9.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    21   9.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    21   9.7  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 112 CYHRVTLSA*EVCGCCCKNCATNNYP*C 29
           C+   T+    V G  C++CA  N+  C
Sbjct: 62  CHFSWTMEHYHVMGPACRDCAKGNHTDC 89


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 76  KPLKPTTLHDGNIKKSVYENITYVRKLMCKENMPGEH 186
           +PL   TL DGN +  +Y   TY  K   K +   EH
Sbjct: 527 RPLNQWTLEDGNGESFIYG--TYGDKQAVKMDSGSEH 561


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 76  KPLKPTTLHDGNIKKSVYENITYVRKLMCKENMPGEH 186
           +PL   TL DGN +  +Y   TY  K   K +   EH
Sbjct: 528 RPLNQWTLEDGNGESFIYG--TYGDKQAVKMDSGSEH 562


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/37 (18%), Positives = 18/37 (48%)
 Frame = +1

Query: 82  LKPTTLHDGNIKKSVYENITYVRKLMCKENMPGEHDH 192
           +  ++++D     ++  ++      MC+ N P + DH
Sbjct: 526 MNTSSMNDSPSPTTILTSVNSSGNYMCRSNPPAQSDH 562



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 19  CLCCTMDNYSLHNFYNNNRKPLKPTTLH 102
           CL   +  Y L + Y   +K   P +LH
Sbjct: 260 CLSTRLFYYQLTDLYKKIKKACPPLSLH 287


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 4    MHQ*YCLCCTMDNYSLHNFYNNNRKP 81
            +HQ   L  T   Y++  FY  NRKP
Sbjct: 2275 LHQTNKLVTTTIEYAVKQFYLLNRKP 2300


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 70  CCCKNCATNNYP 35
           CCC  CA++N P
Sbjct: 548 CCCFCCASSNGP 559


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 63  QQQPQTSQADNVTRW*H*KIGLRKYHICSQADVQR 167
           QQQ Q S A   + W   K+  +K H   QA + +
Sbjct: 386 QQQQQQSAAAPPSYWKQKKLPTKKQHKQLQAQLDK 420


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/22 (36%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -1

Query: 226 CFLC-YNRDCKTCDRARQAYFL 164
           C  C  NRD   C+R ++ +F+
Sbjct: 367 CIDCGANRDGPNCERCKENFFM 388


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 133  NITYVRKLMCKENMPGEHDHKFYNRGYNKE 222
            N+ Y R +  K       DH+ Y  GY K+
Sbjct: 1150 NMAYSRLVDAKVGFITPFDHQRYVAGYQKK 1179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,350
Number of Sequences: 2352
Number of extensions: 4140
Number of successful extensions: 57
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)