Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26j22
         (495 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   9.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   9.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   9.5  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 246 RSNDYCDHVYGSMAHGSGMSCSDIV 320
           + N+Y D+ + S ++GS  S SD++
Sbjct: 134 QENNYNDNYFYSKSNGSNSSNSDVL 158



 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 243 RRSNDYCDHVYGSMAHGSGMSCSD 314
           R+++DY D+   SM +    SC+D
Sbjct: 171 RKNSDYLDNQEVSMENTENKSCTD 194


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -2

Query: 221 VASFVRAATRYTCTVCPSYTCTLHFLYTSTR 129
           +  F   A  ++C  CP+++ +  + +T  R
Sbjct: 267 IGKFKHEAGSHSCEACPAHSKSSDYGFTECR 297


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 370 NWFVPSNTLKGTPITRVYSDK 432
           N+FV ++ + G P  RV+S +
Sbjct: 43  NFFVATSPVIGEPCQRVHSSR 63


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 332 QASTCLRLCTWRGTGSC 382
           Q  TC    +WRG  SC
Sbjct: 242 QTITCPIKVSWRGNYSC 258


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 332 QASTCLRLCTWRGTGSC 382
           Q  TC    +WRG  SC
Sbjct: 293 QTITCPIKVSWRGNYSC 309


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 332 QASTCLRLCTWRGTGSC 382
           Q  TC    +WRG  SC
Sbjct: 242 QTITCPIKVSWRGNYSC 258


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,440
Number of Sequences: 438
Number of extensions: 3628
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)