Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26i22
(456 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59832-1|AAC50661.1| 465|Homo sapiens FREAC-4 protein. 34 0.20
U59831-1|AAC50660.1| 465|Homo sapiens forkhead related activato... 34 0.20
AK130324-1|BAC85326.1| 277|Homo sapiens protein ( Homo sapiens ... 31 2.5
BC030530-1|AAH30530.1| 617|Homo sapiens synovial apoptosis inhi... 30 3.3
AL834139-1|CAD38854.1| 1340|Homo sapiens hypothetical protein pr... 30 3.3
AK001807-1|BAA91920.1| 138|Homo sapiens protein ( Homo sapiens ... 30 3.3
AB024690-1|BAC57449.1| 617|Homo sapiens Synoviolin1 protein. 30 3.3
D63477-1|BAA09764.1| 885|Homo sapiens KIAA0143 protein. 29 5.7
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 29 5.7
BC131486-1|AAI31487.1| 674|Homo sapiens KIAA0143 protein protein. 29 5.7
BC071611-1|AAH71611.1| 888|Homo sapiens KIAA0143 protein protein. 29 5.7
BC047323-1|AAH47323.1| 199|Homo sapiens KIAA0143 protein protein. 29 5.7
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 29 5.7
AY358961-1|AAQ89320.1| 428|Homo sapiens POM121-like protein. 29 5.7
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 29 5.7
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 29 5.7
AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein. 29 7.6
AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein. 29 7.6
AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein. 29 7.6
U38847-1|AAC50379.1| 1621|Homo sapiens TAR RNA loop binding prot... 29 10.0
BX641072-1|CAE46035.1| 496|Homo sapiens hypothetical protein pr... 29 10.0
BC015476-1|AAH15476.1| 622|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 29 10.0
AL355472-5|CAI22931.1| 1621|Homo sapiens Tar (HIV-1) RNA binding... 29 10.0
AL137455-1|CAB70746.1| 240|Homo sapiens hypothetical protein pr... 29 10.0
AL136124-1|CAI22828.1| 1621|Homo sapiens Tar (HIV-1) RNA binding... 29 10.0
AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic co... 29 10.0
AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic co... 29 10.0
AK222598-1|BAD96318.1| 622|Homo sapiens DEAD-box protein abstra... 29 10.0
AK097197-1|BAC04974.1| 187|Homo sapiens protein ( Homo sapiens ... 29 10.0
AK027768-1|BAB55355.1| 622|Homo sapiens protein ( Homo sapiens ... 29 10.0
AK001255-1|BAA91585.1| 622|Homo sapiens protein ( Homo sapiens ... 29 10.0
AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coi... 29 10.0
AF195417-1|AAF04150.1| 621|Homo sapiens DEAD-box protein abstra... 29 10.0
>U59832-1|AAC50661.1| 465|Homo sapiens FREAC-4 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.20
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +1
Query: 127 EDEGIGSG-RLPVEVLTRFEQQDNAGRDELPTLANLLAFLEAESRRHEIMPPPSSSGSRV 303
+DEG G G RL V R ++ AG DEL L E E ++ PP+
Sbjct: 36 DDEGGGGGPRLAVPAQRRRRRRSYAGEDELEDLE------EEEDDDDILLAPPAGGSPAP 89
Query: 304 PASGHAVSVAXRGGGG 351
P A GGGG
Sbjct: 90 PGPAPAAGAGAGGGGG 105
>U59831-1|AAC50660.1| 465|Homo sapiens forkhead related activator 4
protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.20
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +1
Query: 127 EDEGIGSG-RLPVEVLTRFEQQDNAGRDELPTLANLLAFLEAESRRHEIMPPPSSSGSRV 303
+DEG G G RL V R ++ AG DEL L E E ++ PP+
Sbjct: 36 DDEGGGGGPRLAVPAQRRRRRRSYAGEDELEDLE------EEEDDDDILLAPPAGGSPAP 89
Query: 304 PASGHAVSVAXRGGGG 351
P A GGGG
Sbjct: 90 PGPAPAAGAGAGGGGG 105
>AK130324-1|BAC85326.1| 277|Homo sapiens protein ( Homo sapiens
cDNA FLJ26814 fis, clone PRS06344. ).
Length = 277
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +1
Query: 253 SRRHEIMPPPSSSGSRVPASGHAVSVAXRGGGGDKRG 363
SRR+ PP + GSR PA G GG GD G
Sbjct: 171 SRRNCTPTPPYAGGSREPARGKEGVWTPEGGDGDPEG 207
>BC030530-1|AAH30530.1| 617|Homo sapiens synovial apoptosis
inhibitor 1, synoviolin protein.
Length = 617
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +1
Query: 268 IMPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQRLTALMAAVGGPRCAFCHESG 435
+ PPPSS + P S A +++ G TA A GP E+G
Sbjct: 394 VPPPPSSGEAVAPPSTSAAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAG 449
>AL834139-1|CAD38854.1| 1340|Homo sapiens hypothetical protein
protein.
Length = 1340
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +1
Query: 241 LEAESRRHEIMPPPSSSGSRVPA--SGHAVSVAXRGGGGDKRGPSQRLTALM--AAVGGP 408
L+ S R EI+P S V A +GH + +A G D++G R+ AL+ A G P
Sbjct: 629 LDPRSPRFEILPEGSLRIQPVLAQDAGHYLCLASNSAGSDRQGRDLRVLALLPCEASGSP 688
Query: 409 R 411
+
Sbjct: 689 K 689
>AK001807-1|BAA91920.1| 138|Homo sapiens protein ( Homo sapiens
cDNA FLJ10945 fis, clone OVARC1001425. ).
Length = 138
Score = 30.3 bits (65), Expect = 3.3
Identities = 28/90 (31%), Positives = 33/90 (36%), Gaps = 2/90 (2%)
Frame = -3
Query: 403 LPPLP*AQSVVETAPSYPLPLPXEQPKRRGRKP--AHATQRRRVVA*SRVCDFRLLKMPA 230
LPPLP + T+P P P P RR R P AH R + P
Sbjct: 16 LPPLP---ASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALT---------FWAPG 63
Query: 229 DWPG*AVRPYLRCPAARSE*APQPAAYRNR 140
WP + P P R+ P PAA R
Sbjct: 64 SWPRVLLVPRSPGPVLRAPRLPHPAARARR 93
>AB024690-1|BAC57449.1| 617|Homo sapiens Synoviolin1 protein.
Length = 617
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +1
Query: 268 IMPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQRLTALMAAVGGPRCAFCHESG 435
+ PPPSS + P S A +++ G TA A GP E+G
Sbjct: 394 VPPPPSSGEAVAPPSTSAAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAG 449
>D63477-1|BAA09764.1| 885|Homo sapiens KIAA0143 protein.
Length = 885
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 151 RLPVEVLTRFEQQDNAGRDELPTLANLLAFLEAESRRHEIMPPPSSSGSRVPASGHA 321
RL +E + ++ A + E + ANLL A+ I PPPS SG+ SGHA
Sbjct: 813 RLVIEKFQKAPFEEIAAQCE--SKANLLHDRLAQILELTIRPPPSPSGTLTITSGHA 867
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = +1
Query: 250 ESRRHEIMPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQR 375
E RH PPP S G P G A RGG G RGP R
Sbjct: 90 ERGRHGPPPPPRSRG---PPRGFG---AGRGGSGGTRGPPSR 125
>BC131486-1|AAI31487.1| 674|Homo sapiens KIAA0143 protein protein.
Length = 674
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 151 RLPVEVLTRFEQQDNAGRDELPTLANLLAFLEAESRRHEIMPPPSSSGSRVPASGHA 321
RL +E + ++ A + E + ANLL A+ I PPPS SG+ SGHA
Sbjct: 602 RLVIEKFQKAPFEEIAAQCE--SKANLLHDRLAQILELTIRPPPSPSGTLTITSGHA 656
>BC071611-1|AAH71611.1| 888|Homo sapiens KIAA0143 protein protein.
Length = 888
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 151 RLPVEVLTRFEQQDNAGRDELPTLANLLAFLEAESRRHEIMPPPSSSGSRVPASGHA 321
RL +E + ++ A + E + ANLL A+ I PPPS SG+ SGHA
Sbjct: 816 RLVIEKFQKAPFEEIAAQCE--SKANLLHDRLAQILELTIRPPPSPSGTLTITSGHA 870
>BC047323-1|AAH47323.1| 199|Homo sapiens KIAA0143 protein protein.
Length = 199
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 151 RLPVEVLTRFEQQDNAGRDELPTLANLLAFLEAESRRHEIMPPPSSSGSRVPASGHA 321
RL +E + ++ A + E + ANLL A+ I PPPS SG+ SGHA
Sbjct: 127 RLVIEKFQKAPFEEIAAQCE--SKANLLHDRLAQILELTIRPPPSPSGTLTITSGHA 181
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = +1
Query: 250 ESRRHEIMPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQR 375
E RH PPP S G P G A RGG G RGP R
Sbjct: 90 ERGRHGPPPPPRSRG---PPRGFG---AGRGGSGGTRGPPSR 125
>AY358961-1|AAQ89320.1| 428|Homo sapiens POM121-like protein.
Length = 428
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -2
Query: 305 GTRDPEEEGGGIISCLRLSASKNASRLARVGSSS-LPALSCCSKRVSTSTGSLPEPMPSS 129
G DP G+ S +S K+ SS LPA S S+ + T +P P P++
Sbjct: 297 GLLDPLASAAGVPSTAPMSGKKHRPPGPLFSSSDPLPATSSDSQDSAQVTSLIPAPFPAA 356
Query: 128 SHAVSLREKGMG 93
S +R G
Sbjct: 357 SMDAGMRRTRHG 368
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = +1
Query: 250 ESRRHEIMPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQR 375
E RH PPP S G P G A RGG G RGP R
Sbjct: 90 ERGRHGPPPPPRSRG---PPRGFG---AGRGGSGGTRGPPSR 125
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = +1
Query: 250 ESRRHEIMPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQR 375
E RH PPP S G P G A RGG G RGP R
Sbjct: 90 ERGRHGPPPPPRSRG---PPRGFG---AGRGGSGGTRGPPSR 125
>AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +1
Query: 271 MPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQRLTALMAAVGGPRCAFCHESG 435
+PPP SSG V + +++ G TA A GP E+G
Sbjct: 394 VPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAG 448
>AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +1
Query: 271 MPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQRLTALMAAVGGPRCAFCHESG 435
+PPP SSG V + +++ G TA A GP E+G
Sbjct: 394 VPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAG 448
>AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein.
Length = 579
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +1
Query: 271 MPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQRLTALMAAVGGPRCAFCHESG 435
+PPP SSG V + +++ G TA A GP E+G
Sbjct: 357 VPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAG 411
>U38847-1|AAC50379.1| 1621|Homo sapiens TAR RNA loop binding protein
protein.
Length = 1621
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 310 SGHAVSVAXRGGG-GDKRGPSQRLTALMA 393
+G AV++A GGG GD+ GP++ AL+A
Sbjct: 164 AGTAVALALGGGGDGDEAGPAEDAAALVA 192
>BX641072-1|CAE46035.1| 496|Homo sapiens hypothetical protein
protein.
Length = 496
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 388 MAAVGGPR-CAFCHESGHDVAACP 456
M +GG R CAFC GH + CP
Sbjct: 447 MLDIGGERGCAFCGGLGHRITDCP 470
>BC015476-1|AAH15476.1| 622|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41 protein.
Length = 622
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 388 MAAVGGPR-CAFCHESGHDVAACP 456
M +GG R CAFC GH + CP
Sbjct: 573 MLDIGGERGCAFCGGLGHRITDCP 596
>AL355472-5|CAI22931.1| 1621|Homo sapiens Tar (HIV-1) RNA binding
protein 1 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 310 SGHAVSVAXRGGG-GDKRGPSQRLTALMA 393
+G AV++A GGG GD+ GP++ AL+A
Sbjct: 164 AGTAVALALGGGGDGDEAGPAEDAAALVA 192
>AL137455-1|CAB70746.1| 240|Homo sapiens hypothetical protein
protein.
Length = 240
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 388 MAAVGGPR-CAFCHESGHDVAACP 456
M +GG R CAFC GH + CP
Sbjct: 191 MLDIGGERGCAFCGGLGHRITDCP 214
>AL136124-1|CAI22828.1| 1621|Homo sapiens Tar (HIV-1) RNA binding
protein 1 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 310 SGHAVSVAXRGGG-GDKRGPSQRLTALMA 393
+G AV++A GGG GD+ GP++ AL+A
Sbjct: 164 AGTAVALALGGGGDGDEAGPAEDAAALVA 192
>AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2948
Score = 28.7 bits (61), Expect = 10.0
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 244 EAESRRHEIMPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQRLTALMAAVGGP 408
+ E + E+ P S + SR S H+ +GG G GP + TA A G P
Sbjct: 607 DPEVGKDELSKPSSDAESRDHPSSHSAQPPRKGGAGHTDGPHSQ-TAEADASGLP 660
>AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2675
Score = 28.7 bits (61), Expect = 10.0
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 244 EAESRRHEIMPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQRLTALMAAVGGP 408
+ E + E+ P S + SR S H+ +GG G GP + TA A G P
Sbjct: 334 DPEVGKDELSKPSSDAESRDHPSSHSAQPPRKGGAGHTDGPHSQ-TAEADASGLP 387
>AK222598-1|BAD96318.1| 622|Homo sapiens DEAD-box protein abstrakt
variant protein.
Length = 622
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 388 MAAVGGPR-CAFCHESGHDVAACP 456
M +GG R CAFC GH + CP
Sbjct: 573 MLDIGGERGCAFCGGLGHRITDCP 596
>AK097197-1|BAC04974.1| 187|Homo sapiens protein ( Homo sapiens
cDNA FLJ39878 fis, clone SPLEN2016045, moderately
similar to Homo sapiens mRNA for Hrs. ).
Length = 187
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 251 SASKNASRLARVGSSSLPALSCCSKRVSTSTGSLPEPMPSSSH 123
SA ++ R R G SS S C++R S P +PSS H
Sbjct: 44 SACRSRRRSGRCGWSSRSRRSRCARRCPPSPCPTPRHVPSSRH 86
>AK027768-1|BAB55355.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ14862 fis, clone PLACE1001739, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE PL10. ).
Length = 622
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 388 MAAVGGPR-CAFCHESGHDVAACP 456
M +GG R CAFC GH + CP
Sbjct: 573 MLDIGGERGCAFCGGLGHRITDCP 596
>AK001255-1|BAA91585.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ10393 fis, clone NT2RM4000191, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE PL10. ).
Length = 622
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 388 MAAVGGPR-CAFCHESGHDVAACP 456
M +GG R CAFC GH + CP
Sbjct: 573 MLDIGGERGCAFCGGLGHRITDCP 596
>AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coiled
coil 2, long isoform protein.
Length = 2948
Score = 28.7 bits (61), Expect = 10.0
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 244 EAESRRHEIMPPPSSSGSRVPASGHAVSVAXRGGGGDKRGPSQRLTALMAAVGGP 408
+ E + E+ P S + SR S H+ +GG G GP + TA A G P
Sbjct: 607 DPEVGKDELSKPSSDAESRDHPSSHSAQPPRKGGAGHTDGPHSQ-TAEADASGLP 660
>AF195417-1|AAF04150.1| 621|Homo sapiens DEAD-box protein abstrakt
protein.
Length = 621
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 388 MAAVGGPR-CAFCHESGHDVAACP 456
M +GG R CAFC GH + CP
Sbjct: 572 MLDIGGERGCAFCGGLGHRITDCP 595
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,527,352
Number of Sequences: 237096
Number of extensions: 1622607
Number of successful extensions: 5884
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 5387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5861
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -