Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26i21
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 236 8e-63
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 236 8e-63
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 236 8e-63
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 236 8e-63
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 236 8e-63
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 236 8e-63
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 234 4e-62
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 234 4e-62
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 234 4e-62
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 140 1e-33
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 140 1e-33
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 140 1e-33
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 96 2e-20
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 96 2e-20
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 74 7e-14
Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain (pr... 54 6e-08
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain (pr... 52 4e-07
U80839-15|AAB37911.1| 430|Caenorhabditis elegans Hypothetical p... 32 0.37
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 4.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 4.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 4.6
Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alph... 27 8.1
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 236 bits (578), Expect = 8e-63
Identities = 108/148 (72%), Positives = 131/148 (88%)
Frame = +2
Query: 113 KSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLY 292
K++NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W+FGLQYTD+KG TW+KL
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 293 KKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETS 472
KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYLQVK+ ILSDEIYCPPETS
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 473 VLLASYAVQARHGEHNPALHGPGFLAND 556
VLLASYA+QA++G++ P H G L D
Sbjct: 124 VLLASYAMQAKYGDYVPETHVAGCLTAD 151
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 558 RLLPQRVTDQHKMSREEWE 614
RLLPQRV Q K++ EEWE
Sbjct: 152 RLLPQRVLGQFKLNSEEWE 170
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 236 bits (578), Expect = 8e-63
Identities = 108/148 (72%), Positives = 131/148 (88%)
Frame = +2
Query: 113 KSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLY 292
K++NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W+FGLQYTD+KG TW+KL
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 293 KKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETS 472
KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYLQVK+ ILSDEIYCPPETS
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 473 VLLASYAVQARHGEHNPALHGPGFLAND 556
VLLASYA+QA++G++ P H G L D
Sbjct: 124 VLLASYAMQAKYGDYVPETHVAGCLTAD 151
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 558 RLLPQRVTDQHKMSREEWE 614
RLLPQRV Q K++ EEWE
Sbjct: 152 RLLPQRVLGQFKLNSEEWE 170
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 236 bits (578), Expect = 8e-63
Identities = 108/148 (72%), Positives = 131/148 (88%)
Frame = +2
Query: 113 KSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLY 292
K++NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W+FGLQYTD+KG TW+KL
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 293 KKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETS 472
KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYLQVK+ ILSDEIYCPPETS
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 473 VLLASYAVQARHGEHNPALHGPGFLAND 556
VLLASYA+QA++G++ P H G L D
Sbjct: 124 VLLASYAMQAKYGDYVPETHVAGCLTAD 151
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 558 RLLPQRVTDQHKMSREEWE 614
RLLPQRV Q K++ EEWE
Sbjct: 152 RLLPQRVLGQFKLNSEEWE 170
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 236 bits (578), Expect = 8e-63
Identities = 108/148 (72%), Positives = 131/148 (88%)
Frame = +2
Query: 113 KSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLY 292
K++NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W+FGLQYTD+KG TW+KL
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 293 KKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETS 472
KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYLQVK+ ILSDEIYCPPETS
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 473 VLLASYAVQARHGEHNPALHGPGFLAND 556
VLLASYA+QA++G++ P H G L D
Sbjct: 124 VLLASYAMQAKYGDYVPETHVAGCLTAD 151
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 558 RLLPQRVTDQHKMSREEWE 614
RLLPQRV Q K++ EEWE
Sbjct: 152 RLLPQRVLGQFKLNSEEWE 170
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 236 bits (578), Expect = 8e-63
Identities = 108/148 (72%), Positives = 131/148 (88%)
Frame = +2
Query: 113 KSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLY 292
K++NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W+FGLQYTD+KG TW+KL
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 293 KKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETS 472
KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYLQVK+ ILSDEIYCPPETS
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 473 VLLASYAVQARHGEHNPALHGPGFLAND 556
VLLASYA+QA++G++ P H G L D
Sbjct: 124 VLLASYAMQAKYGDYVPETHVAGCLTAD 151
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 558 RLLPQRVTDQHKMSREEWE 614
RLLPQRV Q K++ EEWE
Sbjct: 152 RLLPQRVLGQFKLNSEEWE 170
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 236 bits (578), Expect = 8e-63
Identities = 108/148 (72%), Positives = 131/148 (88%)
Frame = +2
Query: 113 KSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLY 292
K++NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W+FGLQYTD+KG TW+KL
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 293 KKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETS 472
KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYLQVK+ ILSDEIYCPPETS
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 473 VLLASYAVQARHGEHNPALHGPGFLAND 556
VLLASYA+QA++G++ P H G L D
Sbjct: 124 VLLASYAMQAKYGDYVPETHVAGCLTAD 151
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 558 RLLPQRVTDQHKMSREEWE 614
RLLPQRV Q K++ EEWE
Sbjct: 152 RLLPQRVLGQFKLNSEEWE 170
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 234 bits (572), Expect = 4e-62
Identities = 107/146 (73%), Positives = 129/146 (88%)
Frame = +2
Query: 119 MNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLYKK 298
+NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W+FGLQYTD+KG TW+KL KK
Sbjct: 7 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 66
Query: 299 VMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVL 478
V+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYLQVK+ ILSDEIYCPPETSVL
Sbjct: 67 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 126
Query: 479 LASYAVQARHGEHNPALHGPGFLAND 556
LASYA+QA++G++ P H G L D
Sbjct: 127 LASYAMQAKYGDYVPETHVAGCLTAD 152
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 558 RLLPQRVTDQHKMSREEWE 614
RLLPQRV Q K++ EEWE
Sbjct: 153 RLLPQRVLGQFKLNSEEWE 171
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 234 bits (572), Expect = 4e-62
Identities = 107/146 (73%), Positives = 129/146 (88%)
Frame = +2
Query: 119 MNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLYKK 298
+NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W+FGLQYTD+KG TW+KL KK
Sbjct: 7 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 66
Query: 299 VMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVL 478
V+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYLQVK+ ILSDEIYCPPETSVL
Sbjct: 67 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 126
Query: 479 LASYAVQARHGEHNPALHGPGFLAND 556
LASYA+QA++G++ P H G L D
Sbjct: 127 LASYAMQAKYGDYVPETHVAGCLTAD 152
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 558 RLLPQRVTDQHKMSREEWE 614
RLLPQRV Q K++ EEWE
Sbjct: 153 RLLPQRVLGQFKLNSEEWE 171
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 234 bits (572), Expect = 4e-62
Identities = 107/146 (73%), Positives = 129/146 (88%)
Frame = +2
Query: 119 MNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLYKK 298
+NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W+FGLQYTD+KG TW+KL KK
Sbjct: 7 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 66
Query: 299 VMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVL 478
V+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYLQVK+ ILSDEIYCPPETSVL
Sbjct: 67 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 126
Query: 479 LASYAVQARHGEHNPALHGPGFLAND 556
LASYA+QA++G++ P H G L D
Sbjct: 127 LASYAMQAKYGDYVPETHVAGCLTAD 152
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 558 RLLPQRVTDQHKMSREEWE 614
RLLPQRV Q K++ EEWE
Sbjct: 153 RLLPQRVLGQFKLNSEEWE 171
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 140 bits (338), Expect = 1e-33
Identities = 68/138 (49%), Positives = 94/138 (68%), Gaps = 4/138 (2%)
Frame = +2
Query: 113 KSMNVRVTTMDAELE-FAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKL 289
K + +V+TMDA+LE I++T TG+ LF+ V + IGLRE W+FGLQ+T+ K W++
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETWYFGLQFTNKKNIPCWLQN 71
Query: 290 YKKVMQQDVKKENP---LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCP 460
K + QD++K+ F F KFYPEDV E+I + T LF+LQ++ AILS +YC
Sbjct: 72 DKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHLFFLQIREAILSMNLYCS 131
Query: 461 PETSVLLASYAVQARHGE 514
PE SVLLAS+AVQA HG+
Sbjct: 132 PEASVLLASFAVQAMHGD 149
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 140 bits (338), Expect = 1e-33
Identities = 68/138 (49%), Positives = 94/138 (68%), Gaps = 4/138 (2%)
Frame = +2
Query: 113 KSMNVRVTTMDAELE-FAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKL 289
K + +V+TMDA+LE I++T TG+ LF+ V + IGLRE W+FGLQ+T+ K W++
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETWYFGLQFTNKKNIPCWLQN 71
Query: 290 YKKVMQQDVKKENP---LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCP 460
K + QD++K+ F F KFYPEDV E+I + T LF+LQ++ AILS +YC
Sbjct: 72 DKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHLFFLQIREAILSMNLYCS 131
Query: 461 PETSVLLASYAVQARHGE 514
PE SVLLAS+AVQA HG+
Sbjct: 132 PEASVLLASFAVQAMHGD 149
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 140 bits (338), Expect = 1e-33
Identities = 68/138 (49%), Positives = 94/138 (68%), Gaps = 4/138 (2%)
Frame = +2
Query: 113 KSMNVRVTTMDAELE-FAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKL 289
K + +V+TMDA+LE I++T TG+ LF+ V + IGLRE W+FGLQ+T+ K W++
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETWYFGLQFTNKKNIPCWLQN 71
Query: 290 YKKVMQQDVKKENP---LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCP 460
K + QD++K+ F F KFYPEDV E+I + T LF+LQ++ AILS +YC
Sbjct: 72 DKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHLFFLQIREAILSMNLYCS 131
Query: 461 PETSVLLASYAVQARHGE 514
PE SVLLAS+AVQA HG+
Sbjct: 132 PEASVLLASFAVQAMHGD 149
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 95.9 bits (228), Expect = 2e-20
Identities = 50/158 (31%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Frame = +2
Query: 113 KSMNVRVTTMD-AELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKL 289
K + +V +D A L + + G +L+++V ++ L E +FGLQYTD W+
Sbjct: 33 KFVQCKVLLLDGAHLNIVVPRNAVGSELYEEVFYSLDLEERDYFGLQYTDPFNVQHWLDP 92
Query: 290 YKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPET 469
KKV +Q V P +FR KF+ + + L +E+T F+LQ+K I S + CP +
Sbjct: 93 TKKVAKQ-VAIGPPFTLRFRVKFFTSEPSSNLKEELTRYQFFLQIKQDISSGRLQCPHQL 151
Query: 470 SVLLASYAVQARHGEHNPALHGPGFLANDPFTSSKSDR 583
++ LA++A+Q+ G++NP LH F++ F + ++
Sbjct: 152 AIELAAFALQSELGDYNPELHTALFISEFRFHPEQDEK 189
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 95.9 bits (228), Expect = 2e-20
Identities = 50/158 (31%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Frame = +2
Query: 113 KSMNVRVTTMD-AELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKL 289
K + +V +D A L + + G +L+++V ++ L E +FGLQYTD W+
Sbjct: 49 KFVQCKVLLLDGAHLNIVVPRNAVGSELYEEVFYSLDLEERDYFGLQYTDPFNVQHWLDP 108
Query: 290 YKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPET 469
KKV +Q V P +FR KF+ + + L +E+T F+LQ+K I S + CP +
Sbjct: 109 TKKVAKQ-VAIGPPFTLRFRVKFFTSEPSSNLKEELTRYQFFLQIKQDISSGRLQCPHQL 167
Query: 470 SVLLASYAVQARHGEHNPALHGPGFLANDPFTSSKSDR 583
++ LA++A+Q+ G++NP LH F++ F + ++
Sbjct: 168 AIELAAFALQSELGDYNPELHTALFISEFRFHPEQDEK 205
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 74.1 bits (174), Expect = 7e-14
Identities = 38/119 (31%), Positives = 63/119 (52%)
Frame = +2
Query: 158 FAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQ 337
F +Q G+ L D+V + + L E +FGL + D G+ W+ K +++Q +
Sbjct: 59 FLLQHKAIGQTLLDEVCRHLNLLECDYFGLSFIDINGNHCWLDREKTILRQITNGSTDAK 118
Query: 338 FKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHGE 514
F F KFY + D L +E T LF +Q+K + E++C T+ LL++Y VQ+ G+
Sbjct: 119 FYFVVKFYTPNPID-LEEEYTRYLFTMQIKRDLALGELHCSDNTASLLSAYLVQSECGD 176
>Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 56.8 bits (131), Expect = 1e-08
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Frame = +2
Query: 110 PKSMNVRVTTMDA-ELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQY----TDSKGDL 274
P + VT +D+ F I++ + G L ++V + + E +FGL + S
Sbjct: 26 PNQIRCTVTFLDSTSYHFEIEKNSLGIVLLEKVFNYLEIIEKDYFGLVFIAVDNSSAQQK 85
Query: 275 TWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIY 454
W+ K + +Q + P FR KFY D + L E T FY QV+ + +
Sbjct: 86 KWLDPSKNLRKQMICP--PYHLFFRVKFYVRD-PNRLRDEFTRFQFYQQVRQNLEEGRLP 142
Query: 455 CPPETSVLLASYAVQARHGEHNPALHG 535
C + LLASY VQA G+ HG
Sbjct: 143 CNEGSLALLASYVVQAEVGDFEEKTHG 169
>Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 56.8 bits (131), Expect = 1e-08
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Frame = +2
Query: 110 PKSMNVRVTTMDA-ELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQY----TDSKGDL 274
P + VT +D+ F I++ + G L ++V + + E +FGL + S
Sbjct: 26 PNQIRCTVTFLDSTSYHFEIEKNSLGIVLLEKVFNYLEIIEKDYFGLVFIAVDNSSAQQK 85
Query: 275 TWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIY 454
W+ K + +Q + P FR KFY D + L E T FY QV+ + +
Sbjct: 86 KWLDPSKNLRKQMICP--PYHLFFRVKFYVRD-PNRLRDEFTRFQFYQQVRQNLEEGRLP 142
Query: 455 CPPETSVLLASYAVQARHGEHNPALHG 535
C + LLASY VQA G+ HG
Sbjct: 143 CNEGSLALLASYVVQAEVGDFEEKTHG 169
>U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform a protein.
Length = 635
Score = 54.4 bits (125), Expect = 6e-08
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Frame = +2
Query: 170 QTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLYKKV--MQQDVKKENPLQFK 343
+T + + + D V + ++E F GL+Y D W+ L + + + ++ K E+ +
Sbjct: 47 RTQSAQTILDYVCQLKHIQEKDFLGLRYQDHHKHRYWLDLTRSINHVVKNFKTES-MTLH 105
Query: 344 FRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHGEHNP 523
R ++YP D A + +LF +Q++ +L +YCP ++ LA+ +QA+ G++N
Sbjct: 106 LRFRYYPSDPARLRDPNLRYQLF-VQLQRDLLHGRLYCPTSSAAELAALILQAQLGDYNE 164
Query: 524 ALH 532
H
Sbjct: 165 EKH 167
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 155 EFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENP 331
EF + + + G+ LF QV + + + E +F L + D +G W+ K + +Q K P
Sbjct: 49 EFEVNKNSEGEALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLP 106
Query: 332 LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHG 511
+F F KFYP ++ + +LQ++ +L+ + +T LL S+ Q G
Sbjct: 107 WEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGSFVAQIEFG 165
Query: 512 E 514
+
Sbjct: 166 D 166
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 155 EFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENP 331
EF + + + G+ LF QV + + + E +F L + D +G W+ K + +Q K P
Sbjct: 38 EFEVNKNSEGEALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLP 95
Query: 332 LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHG 511
+F F KFYP ++ + +LQ++ +L+ + +T LL S+ Q G
Sbjct: 96 WEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGSFVAQIEFG 154
Query: 512 E 514
+
Sbjct: 155 D 155
>Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 155 EFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENP 331
EF + + + G+ LF QV + + + E +F L + D +G W+ K + +Q K P
Sbjct: 38 EFEVNKNSEGEALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLP 95
Query: 332 LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHG 511
+F F KFYP ++ + +LQ++ +L+ + +T LL S+ Q G
Sbjct: 96 WEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGSFVAQIEFG 154
Query: 512 E 514
+
Sbjct: 155 D 155
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 155 EFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENP 331
EF + + + G+ LF QV + + + E +F L + D +G W+ K + +Q K P
Sbjct: 38 EFEVNKNSEGEALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLP 95
Query: 332 LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHG 511
+F F KFYP ++ + +LQ++ +L+ + +T LL S+ Q G
Sbjct: 96 WEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGSFVAQIEFG 154
Query: 512 E 514
+
Sbjct: 155 D 155
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 155 EFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENP 331
EF + + + G+ LF QV + + + E +F L + D +G W+ K + +Q K P
Sbjct: 49 EFEVNKNSEGEALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLP 106
Query: 332 LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHG 511
+F F KFYP ++ + +LQ++ +L+ + +T LL S+ Q G
Sbjct: 107 WEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGSFVAQIEFG 165
Query: 512 E 514
+
Sbjct: 166 D 166
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 155 EFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENP 331
EF + + + G+ LF QV + + + E +F L + D +G W+ K + +Q K P
Sbjct: 38 EFEVNKNSEGEALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLP 95
Query: 332 LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHG 511
+F F KFYP ++ + +LQ++ +L+ + +T LL S+ Q G
Sbjct: 96 WEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGSFVAQIEFG 154
Query: 512 E 514
+
Sbjct: 155 D 155
>Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 155 EFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENP 331
EF + + + G+ LF QV + + + E +F L + D +G W+ K + +Q K P
Sbjct: 38 EFEVNKNSEGEALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLP 95
Query: 332 LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHG 511
+F F KFYP ++ + +LQ++ +L+ + +T LL S+ Q G
Sbjct: 96 WEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGSFVAQIEFG 154
Query: 512 E 514
+
Sbjct: 155 D 155
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 155 EFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENP 331
EF + + + G+ LF QV + + + E +F L + D +G W+ K + +Q K P
Sbjct: 38 EFEVNKNSEGEALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLP 95
Query: 332 LQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHG 511
+F F KFYP ++ + +LQ++ +L+ + +T LL S+ Q G
Sbjct: 96 WEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGSFVAQIEFG 154
Query: 512 E 514
+
Sbjct: 155 D 155
>U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform b protein.
Length = 643
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Frame = +2
Query: 170 QTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIKLYKKV------MQQDVK---K 322
+T + + + D V + ++E F GL+Y D W+ L + + ++++K K
Sbjct: 47 RTQSAQTILDYVCQLKHIQEKDFLGLRYQDHHKHRYWLDLTRSINHVVKNFKKEIKKVGK 106
Query: 323 ENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQA 502
+ R ++YP D A + +LF +Q++ +L +YCP ++ LA+ +QA
Sbjct: 107 TESMTLHLRFRYYPSDPARLRDPNLRYQLF-VQLQRDLLHGRLYCPTSSAAELAALILQA 165
Query: 503 RHGEHNPALH 532
+ G++N H
Sbjct: 166 QLGDYNEEKH 175
>U80839-15|AAB37911.1| 430|Caenorhabditis elegans Hypothetical
protein ZC204.2 protein.
Length = 430
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 231 CGSSVFSTPTPRATSLGSSCIRR*CNKTSRKRIHCSSNSEPNSILRMSPMSS 386
C SS ++P+ S+GS+ + + + HC+ P S SP+SS
Sbjct: 153 CESSKSNSPSESTKSMGSAVLSSSTEPRTPEESHCAPEKSPESTENASPLSS 204
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 175 DHREATLRSSCEDDRPPRGVVLRSSVHRLQGRPHLD 282
D T+ S CEDD P +VL+ +LQ + D
Sbjct: 2778 DFTSLTIMSDCEDDPPADVLVLKQDTSKLQALSYDD 2813
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 175 DHREATLRSSCEDDRPPRGVVLRSSVHRLQGRPHLD 282
D T+ S CEDD P +VL+ +LQ + D
Sbjct: 2778 DFTSLTIMSDCEDDPPADVLVLKQDTSKLQALSYDD 2813
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 175 DHREATLRSSCEDDRPPRGVVLRSSVHRLQGRPHLD 282
D T+ S CEDD P +VL+ +LQ + D
Sbjct: 2778 DFTSLTIMSDCEDDPPADVLVLKQDTSKLQALSYDD 2813
>Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical
protein T19B10.7 protein.
Length = 524
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = -1
Query: 559 RVIGQESRPVQSGIVFSVSGLDRVRSQQHRGLRRAVYFIG*NRVFHL*IEEFQCDLLYEL 380
RVI Q +R + S + +SG+D V+ +++ R + + N + E+ CD +
Sbjct: 119 RVISQTTRLLISRTLLKISGIDEVKYERYSSDDRCIQSLVFNISTYGSSEDILCDTFQSI 178
Query: 379 IGDILR 362
I+R
Sbjct: 179 ACFIIR 184
>AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alpha 1
protein.
Length = 524
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = -1
Query: 559 RVIGQESRPVQSGIVFSVSGLDRVRSQQHRGLRRAVYFIG*NRVFHL*IEEFQCDLLYEL 380
RVI Q +R + S + +SG+D V+ +++ R + + N + E+ CD +
Sbjct: 119 RVISQTTRLLISRTLLKISGIDEVKYERYSSDDRCIQSLVFNISTYGSSEDILCDTFQSI 178
Query: 379 IGDILR 362
I+R
Sbjct: 179 ACFIIR 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,338,203
Number of Sequences: 27780
Number of extensions: 297007
Number of successful extensions: 872
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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