Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26i17
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 38 0.006
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 36 0.024
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 36 0.024
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 36 0.024
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 36 0.024
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 36 0.024
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 36 0.024
AB081597-1|BAC19844.1| 39|Caenorhabditis elegans cyclic AMP-re... 30 1.2
Z68216-5|CAA92464.1| 428|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 29 2.1
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 29 2.1
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 29 2.1
Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 28 4.9
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 28 4.9
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 28 4.9
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 28 4.9
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 28 4.9
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 28 4.9
AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormo... 28 4.9
AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormo... 28 4.9
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 28 4.9
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 4.9
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 28 4.9
AB081598-1|BAC19845.1| 56|Caenorhabditis elegans cyclic AMP-re... 28 4.9
AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical ... 28 6.5
Z75552-4|CAA99942.1| 624|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +1
Query: 436 NTQGQSCSDESCGSGDESPKRKYREMLTRRPSYRKILNDLGGAE 567
+ Q QS E S DE+ +R RE L RRPSYR IL DL A+
Sbjct: 8 SAQQQSALQEGGDSEDEARRR--REQLNRRPSYRMILKDLETAD 49
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 472 GSGDESPKRKYREMLTRRPSYRKILNDLGGAE 567
G E R+ RE L RRPSYR IL DL A+
Sbjct: 10 GGDSEDEARRRREQLNRRPSYRMILKDLETAD 41
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 472 GSGDESPKRKYREMLTRRPSYRKILNDLGGAE 567
G E R+ RE L RRPSYR IL DL A+
Sbjct: 35 GGDSEDEARRRREQLNRRPSYRMILKDLETAD 66
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 472 GSGDESPKRKYREMLTRRPSYRKILNDLGGAE 567
G E R+ RE L RRPSYR IL DL A+
Sbjct: 29 GGDSEDEARRRREQLNRRPSYRMILKDLETAD 60
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 472 GSGDESPKRKYREMLTRRPSYRKILNDLGGAE 567
G E R+ RE L RRPSYR IL DL A+
Sbjct: 29 GGDSEDEARRRREQLNRRPSYRMILKDLETAD 60
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 472 GSGDESPKRKYREMLTRRPSYRKILNDLGGAE 567
G E R+ RE L RRPSYR IL DL A+
Sbjct: 29 GGDSEDEARRRREQLNRRPSYRMILKDLETAD 60
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 472 GSGDESPKRKYREMLTRRPSYRKILNDLGGAE 567
G E R+ RE L RRPSYR IL DL A+
Sbjct: 10 GGDSEDEARRRREQLNRRPSYRMILKDLETAD 41
>AB081597-1|BAC19844.1| 39|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 alpha protein.
Length = 39
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 436 NTQGQSCSDESCGSGDESPKRKYREMLTRRPSYR 537
+ Q QS E S DE+ +R RE L RRPSYR
Sbjct: 8 SAQQQSALQEGGDSEDEARRR--REQLNRRPSYR 39
>Z68216-5|CAA92464.1| 428|Caenorhabditis elegans Hypothetical
protein F27C8.6 protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 349 LVSKPSSVIHTTQGTLQTLQIKPEPNTLVNTQGQSCSDESCGSGDESPKRKYR 507
+ +KPS+++ T+G L TL LVNT GQ D +E+P + YR
Sbjct: 65 MFTKPSNMVQWTRGALNTL--SKTLGLLVNTHGQ--VDIKWHKWNETPVKVYR 113
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 238 SQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTT 384
+Q AQ+Q IQ QQ QT + V P+ +KP+ V +TT
Sbjct: 722 AQKIQAQIQQQIQQQQQRQAQTTPQV--VATPRKKTTPATKPAIVFYTT 768
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 238 SQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTT 384
+Q AQ+Q IQ QQ QT + V P+ +KP+ V +TT
Sbjct: 722 AQKIQAQIQQQIQQQQQRQAQTTPQV--VATPRKKTTPATKPAIVFYTT 768
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 238 SQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTT 384
+Q AQ+Q IQ QQ QT + V P+ +KP+ V +TT
Sbjct: 722 AQKIQAQIQQQIQQQQQRQAQTTPQV--VATPRKKTTPATKPAIVFYTT 768
>Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical
protein F13G3.3 protein.
Length = 501
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +1
Query: 250 SAQVQSVIQPNQQSVIQTASNIQ-SVQIPKGNVILV-SKPSSV-IHTTQGTLQTLQIKPE 420
+ ++++ + N S+ NI+ Q G +I + SK ++ IH Q L+ L +KPE
Sbjct: 294 NTRIKAYKRANVFSIEHVLRNIKHEQQTETGKMIAIPSKINNTWIHWPQKNLKKLAVKPE 353
Query: 421 PNTLVNTQGQSCSDESCGSGDESPK 495
N++ + + D +E PK
Sbjct: 354 FNSITHLKHIELLDGLKSKNEEEPK 378
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 448 QSCSDESCGSGDESPKRKYREMLTRRPSYRKILNDLGGAEIADN 579
+SC+D+ GSGD +R YR + + S N E D+
Sbjct: 222 ESCNDKCWGSGDNDCQRVYRSVCPKSCSQCFYSNSTSSYECCDS 265
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 448 QSCSDESCGSGDESPKRKYREMLTRRPSYRKILNDLGGAEIADN 579
+SC+D+ GSGD +R YR + + S N E D+
Sbjct: 222 ESCNDKCWGSGDNDCQRVYRSVCPKSCSQCFYSNSTSSYECCDS 265
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 448 QSCSDESCGSGDESPKRKYREMLTRRPSYRKILNDLGGAEIADN 579
+SC+D+ GSGD +R YR + + S N E D+
Sbjct: 273 ESCNDKCWGSGDNDCQRVYRSVCPKSCSQCFYSNSTSSYECCDS 316
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1
Query: 331 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 474
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 254 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 305
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1
Query: 331 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 474
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 258 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 309
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1
Query: 331 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 474
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 253 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 304
>AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform b protein.
Length = 526
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1
Query: 331 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 474
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 160 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 211
>AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform a protein.
Length = 577
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1
Query: 331 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 474
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 211 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 262
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1
Query: 331 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 474
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 293 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 344
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1
Query: 331 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 474
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 367 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 418
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 280 NQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQTLQIKPEP 423
+Q S+I T I+S I ++ SKP + Q T++ PEP
Sbjct: 692 HQNSMIPTNPCIESAMIEYSRIMGYSKPGLATNRVQSTVEEAVDPPEP 739
>AB081598-1|BAC19845.1| 56|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 1 protein.
Length = 56
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 472 GSGDESPKRKYREMLTRRPSYR 537
G E R+ RE L RRPSYR
Sbjct: 35 GGDSEDEARRRREQLNRRPSYR 56
>AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical
protein K02D7.2 protein.
Length = 193
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 621 SDTSVSHPGLDPHAIVCNFCSSKVI*NFSIRRTSSQH 511
S +S S LD +VC FC + F +RR H
Sbjct: 27 SSSSASCSSLDNQKLVCQFCKKTYLTYFGLRRHLQFH 63
>Z75552-4|CAA99942.1| 624|Caenorhabditis elegans Hypothetical
protein W04D2.4 protein.
Length = 624
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 621 SDTSVSHPGLDPHAIVCNFCSSKVI 547
SD VSHP L C CSS+ I
Sbjct: 57 SDNMVSHPQLKKRFYCCGLCSSEFI 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,003,467
Number of Sequences: 27780
Number of extensions: 274306
Number of successful extensions: 714
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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