Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26i04
(180 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 20 3.1
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 20 3.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 20 3.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 20 3.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 20 3.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 20 3.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 20 3.1
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 19 5.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 18 9.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 18 9.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 18 9.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 18 9.6
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 107 IFFKLNILTYHNDNEVKYH 51
I L+ T HN+N KY+
Sbjct: 81 IISSLSNKTIHNNNNYKYN 99
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 107 IFFKLNILTYHNDNEVKYH 51
I L+ T HN+N KY+
Sbjct: 81 IISSLSNKTIHNNNNYKYN 99
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 107 IFFKLNILTYHNDNEVKYH 51
I L+ T HN+N KY+
Sbjct: 81 IISSLSNRTIHNNNNYKYN 99
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 107 IFFKLNILTYHNDNEVKYH 51
I L+ T HN+N KY+
Sbjct: 81 IISSLSNKTIHNNNNYKYN 99
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 107 IFFKLNILTYHNDNEVKYH 51
I L+ T HN+N KY+
Sbjct: 81 IISSLSNKTIHNNNNYKYN 99
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 107 IFFKLNILTYHNDNEVKYH 51
I L+ T HN+N KY+
Sbjct: 81 IISSLSNKTIHNNNNYKYN 99
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 107 IFFKLNILTYHNDNEVKYH 51
I L+ T HN+N KY+
Sbjct: 314 IISSLSNKTIHNNNNYKYN 332
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 19.0 bits (37), Expect = 5.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 5 FYLKLRLISFLFI*VRGTLPRYRYDKLI 88
FY + + L+ + +LP Y+Y+ LI
Sbjct: 434 FYQLYKKVMNLYQQYQQSLPVYQYNDLI 461
Score = 18.2 bits (35), Expect = 9.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 90 YINLS*R*RGKVPRTQI 40
Y NL + G+ P TQI
Sbjct: 718 YANLYTKYHGQYPNTQI 734
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = +2
Query: 38 FI*VRGTLPRYRY 76
F+ ++ +PR+RY
Sbjct: 365 FVSIQEQIPRFRY 377
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = +2
Query: 38 FI*VRGTLPRYRY 76
F+ ++ +PR+RY
Sbjct: 365 FVSIQEQIPRFRY 377
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = +2
Query: 38 FI*VRGTLPRYRY 76
F+ ++ +PR+RY
Sbjct: 365 FVSIQEQIPRFRY 377
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = +2
Query: 38 FI*VRGTLPRYRY 76
F+ ++ +PR+RY
Sbjct: 354 FVSIQEQIPRFRY 366
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,653
Number of Sequences: 438
Number of extensions: 263
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used: 2585220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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