Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26h19
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.8  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   3.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   6.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   8.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   8.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 55  HMPLHYQCDINADKNV 102
           H P  Y   +N+DKNV
Sbjct: 495 HKPFTYHIVVNSDKNV 510


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 55  HMPLHYQCDINADKNV 102
           H P  Y   +N+DKNV
Sbjct: 495 HKPFTYHIVVNSDKNV 510


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 55  HMPLHYQCDINADKNV 102
           H P  Y   +N+DKNV
Sbjct: 121 HKPFTYHIVVNSDKNV 136


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +1

Query: 1   EETFNMDSSNCIKIDVKY---HMPLHYQCDINADK 96
           EE  N D    IKI  +Y   H P ++   INADK
Sbjct: 477 EEQRNDDKPFLIKIR-QYRLNHKPFNFHITINADK 510


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +1

Query: 1   EETFNMDSSNCIKIDVKY---HMPLHYQCDINADK 96
           EE  N D    IKI  +Y   H P ++   INADK
Sbjct: 477 EEQRNDDKPFLIKIR-QYRLNHKPFNFHITINADK 510


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 96  FICVNVTLIM*RHMVFYIYFNTITT 22
           F C+ V  ++ R + +Y++   I T
Sbjct: 231 FTCLEVVFVLKRRLGYYLFHTYIPT 255


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 619 ENQMTSPFRSCFYHGRXPT 675
           E     PFR+ F H R PT
Sbjct: 161 EEIRVDPFRTGFEHKRQPT 179


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 619 ENQMTSPFRSCFYHGRXPT 675
           E     PFR+ F H R PT
Sbjct: 161 EEIRVDPFRTGFEHKRQPT 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,689
Number of Sequences: 438
Number of extensions: 2252
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)