Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26h12
(415 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical pr... 28 2.3
AF000194-4|AAK39378.2| 390|Caenorhabditis elegans Suspended ani... 27 4.1
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 27 5.4
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 27 5.4
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 26 9.4
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 26 9.4
AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein. 26 9.4
AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical... 26 9.4
>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical protein
R03G5.3 protein.
Length = 1311
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 310 IENKKYFKYYLL-NCLILMLTRT-NHAVPPWTWNCAKKS*QCRFLRRHQFPYI*F 152
+ N Y KY LL +C++ +++ N +V +KS +C F +++ F Y+ F
Sbjct: 1129 LTNLNYEKYALLVSCMVFVVSNVWNLSVMETLVTHIRKSSRCHFFQQNNFAYVLF 1183
>Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical
protein T12D8.3 protein.
Length = 274
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 133 EMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLY 249
+++ E E K+ +IDT++T LRN E +D Y
Sbjct: 150 KLETETEKKWFAAMRVSDIDTMRTLLRNEPEIIEAKDQY 188
>AF000194-4|AAK39378.2| 390|Caenorhabditis elegans Suspended
animation (anoxia-induced)defective protein 1 protein.
Length = 390
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 265 ILMLTRTNHAVPPWTWNCAKKS*QCRFLRRH 173
+L+L RTN AVP N A+ + + R +RRH
Sbjct: 176 VLILARTNCAVPIQIVNDAEDALEMREMRRH 206
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 107 IICKNTQTWKCKLRKKLNIWKLMTAKKSTLSRL 205
+ C +T W +KKLN WKL K S+L
Sbjct: 8 VTCLDTGFWNEVNKKKLNDWKLDETPKCISSQL 40
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 107 IICKNTQTWKCKLRKKLNIWKLMTAKKSTLSRL 205
+ C +T W +KKLN WKL K S+L
Sbjct: 8 VTCLDTGFWNEVNKKKLNDWKLDETPKCISSQL 40
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 139 QIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDL 246
+IE + +DD E+ T ++F R+S+++ E+R+L
Sbjct: 615 EIERAKEDTTLDDEEDEKTHRSFHRDSVTSDEEREL 650
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 139 QIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDL 246
+IE + +DD E+ T ++F R+S+++ E+R+L
Sbjct: 615 EIERAKEDTTLDDEEDEKTHRSFHRDSVTSDEEREL 650
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 139 QIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDL 246
+IE + +DD E+ T ++F R+S+++ E+R+L
Sbjct: 601 EIERAKEDTTLDDEEDEKTHRSFHRDSVTSDEEREL 636
>AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein.
Length = 287
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 85 EVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMST 228
E ++ L L E I K++++++ EEIDT RNS ++
Sbjct: 237 ETSEALRVTLAEMLTDPTTISSSPKHIKLEEPEEIDTEDLGARNSQNS 284
>AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical
protein Y48C3A.17b protein.
Length = 284
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 85 EVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMST 228
E ++ L L E I K++++++ EEIDT RNS ++
Sbjct: 234 ETSEALRVTLAEMLTDPTTISSSPKHIKLEEPEEIDTEDLGARNSQNS 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,710,115
Number of Sequences: 27780
Number of extensions: 125772
Number of successful extensions: 424
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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