Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26g16
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 217 6e-57
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 217 6e-57
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 83 2e-16
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 83 2e-16
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 81 5e-16
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 81 7e-16
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 70 9e-13
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 70 9e-13
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 65 3e-11
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 65 3e-11
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 64 8e-11
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 63 1e-10
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 60 1e-09
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 57 7e-09
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 54 9e-08
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 52 2e-07
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 51 5e-07
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 50 1e-06
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 49 2e-06
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 47 7e-06
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 47 7e-06
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 39 0.002
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 27 8.6
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 27 8.6
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 217 bits (529), Expect = 6e-57
Identities = 89/115 (77%), Positives = 104/115 (90%)
Frame = +3
Query: 174 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 353
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+LNL WECAIPG+K T WEGGLY++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 354 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKANFVG 518
RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLSLLDE KDW+P+I+IK +G
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIG 115
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 217 bits (529), Expect = 6e-57
Identities = 89/115 (77%), Positives = 104/115 (90%)
Frame = +3
Query: 174 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 353
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+LNL WECAIPG+K T WEGGLY++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 354 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKANFVG 518
RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLSLLDE KDW+P+I+IK +G
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIG 115
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 82.6 bits (195), Expect = 2e-16
Identities = 39/104 (37%), Positives = 59/104 (56%)
Frame = +3
Query: 195 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 374
RL + K ++D P G P ++ N++TWE I G + TP+E G +KL + F ++
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTED-----NILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 375 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKA 506
YP+ PP KF +FHPNVY G++CL +L + W P + A
Sbjct: 63 YPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAA 104
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 82.6 bits (195), Expect = 2e-16
Identities = 39/104 (37%), Positives = 59/104 (56%)
Frame = +3
Query: 195 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 374
RL + K ++D P G P ++ N++TWE I G + TP+E G +KL + F ++
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTED-----NILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 375 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKA 506
YP+ PP KF +FHPNVY G++CL +L + W P + A
Sbjct: 63 YPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAA 104
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 81.0 bits (191), Expect = 5e-16
Identities = 37/100 (37%), Positives = 61/100 (61%)
Frame = +3
Query: 204 EERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPS 383
EE+ W + P G+ A+P+ +G+ +W C +PG +G+PWEGG Y++ + F +P
Sbjct: 42 EEKAKWDERTPQGYTAKPISF-EGADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPI 99
Query: 384 SPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIK 503
PP C+F+ PL HPNV G++ L +L++E W ++K
Sbjct: 100 IPPICEFKTPLHHPNVDLRGSIYLKMLEQE-HWSSETSLK 138
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 80.6 bits (190), Expect = 7e-16
Identities = 40/102 (39%), Positives = 53/102 (51%)
Frame = +3
Query: 174 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 353
M+G A RL E K P G +A P+ N WEC I G + T + G++
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDED----NFFEWECLITGPEETCFANGVFPA 56
Query: 354 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD 479
R+ F DYP SPPK +F +FHPN+Y G VC+S+L D
Sbjct: 57 RITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGD 98
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 70.1 bits (164), Expect = 9e-13
Identities = 35/106 (33%), Positives = 58/106 (54%)
Frame = +3
Query: 183 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 362
+A R+ +E + +D P A P+ + +L W+ I G +P++GG++ L +
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGD-----DLFHWQATIMGPPESPYQGGVFFLTIH 55
Query: 363 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITI 500
F DYP PPK F ++HPN+ +G++CL +L W PA+TI
Sbjct: 56 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTI 99
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 70.1 bits (164), Expect = 9e-13
Identities = 35/106 (33%), Positives = 58/106 (54%)
Frame = +3
Query: 183 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 362
+A R+ +E + +D P A P+ + +L W+ I G +P++GG++ L +
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGD-----DLFHWQATIMGPPESPYQGGVFFLTIH 55
Query: 363 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITI 500
F DYP PPK F ++HPN+ +G++CL +L W PA+TI
Sbjct: 56 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTI 99
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 65.3 bits (152), Expect = 3e-11
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Frame = +3
Query: 174 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 353
MS A+ RL +E + + P G + + N S +L W+ + G +GT + G ++ L
Sbjct: 1 MSDAATRRLMKELAQLKSEAPEGLL---VDNTSTSNDLKQWKIGVVGAEGTLYAGEVFML 57
Query: 354 RMIFKDDYPSSPPKCKF--EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKA 506
+ F YP + P+ F E HP++Y +G +CLS+L + DW PA+++++
Sbjct: 58 QFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSD--DWTPALSVQS 108
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 64.9 bits (151), Expect = 3e-11
Identities = 35/110 (31%), Positives = 58/110 (52%)
Frame = +3
Query: 174 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 353
M+G R+ +E + D G A NPD S N + I G +P+ GG++KL
Sbjct: 1 MAGQLPRRIIKETQRLLADPVPGISA----NPDES-NARYFHVMIAGPDDSPFAGGVFKL 55
Query: 354 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIK 503
+ ++YP + PK +F ++HPN+ G +CL +L ++ W PA+ I+
Sbjct: 56 ELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDK--WSPALQIR 103
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 63.7 bits (148), Expect = 8e-11
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +3
Query: 282 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 461
NL W I G T ++GG +K + F +YP SPP KF ++HPNVY +G +C+S+
Sbjct: 38 NLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISI 97
Query: 462 LDEEKD 479
L D
Sbjct: 98 LHSPID 103
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +3
Query: 282 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 461
++ WE + G T +EGG +K + F DYP PPK KF ++HPN+ G VC+S+
Sbjct: 32 DIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISI 91
Query: 462 LDEEKD 479
L + D
Sbjct: 92 LHDPGD 97
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 282 NLMTWECA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 458
NL+ W IP K+ P+ G +K+ + F DYP PPK FE ++HPNV G CL
Sbjct: 31 NLLKWTVLLIPDKE--PYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLP 88
Query: 459 LLDEEKDWRPA 491
++ E +W+PA
Sbjct: 89 IVTAE-NWKPA 98
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 57.2 bits (132), Expect = 7e-09
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +3
Query: 282 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 458
NL + I G TP+ GG++ L + D YP SPP KF ++HPNV +G +CL
Sbjct: 35 NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLD 94
Query: 459 LLDEEKDWRPAITIK 503
+L ++ W ++T++
Sbjct: 95 ILKDQ--WAASLTLR 107
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 53.6 bits (123), Expect = 9e-08
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Frame = +3
Query: 177 SGIASARLAEERKAWRK--DHPFGFV-ARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLY 347
SG+++ L +K +++ P F+ A P++ N++ W I G TP+EGG+Y
Sbjct: 3 SGVSTVALQRLKKDYQRLLKEPVPFMKAAPLET-----NILEWRYIIIGAPKTPYEGGIY 57
Query: 348 KLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-WRPAITIKANFVG 518
+++F D+P PP P + + +CLS+ D D W PA T+ G
Sbjct: 58 MGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITG 113
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 52.4 bits (120), Expect = 2e-07
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 177 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLR 356
S A RL ++ +D G A P N D N++ W + G TP+ GG Y +
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALP--NED---NILEWHYCLRGSPDTPFYGGYYWGK 71
Query: 357 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKANFVG 518
+IFK+++P SPP P + + +CLS+ D + W P T+ A +G
Sbjct: 72 VIFKENFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVSAILIG 124
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 51.2 bits (117), Expect = 5e-07
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Frame = +3
Query: 306 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLD- 467
I G TP+ GL++ + F YP SPPKC F F+PN+Y G +CLS+L
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 468 ----EEKDWRP 488
E+ W P
Sbjct: 509 WEGRPEEKWNP 519
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 306 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDW 482
I G + TP+EGG+++L + + YP P KF ++HP+V P GT+CL +D W
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV-W 443
Query: 483 RPAITI 500
++TI
Sbjct: 444 PVSMTI 449
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 312 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDE 470
G K T +E G++++R+ D YP P F +FHPN+ SGTVCL ++++
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQ 94
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 16/90 (17%)
Frame = +3
Query: 282 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK---------------CKFEPPL 416
NLM + I G +GTP+ GG +++++ + YP PPK KF +
Sbjct: 49 NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRI 108
Query: 417 FHPNV-YPSGTVCLSLLDEEKDWRPAITIK 503
+HPN+ +GT+CL +L ++ W ++T++
Sbjct: 109 WHPNISSQTGTICLDILKDK--WTASLTLR 136
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 282 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 461
NL W I G GT +EGG+Y R+IF DYP PP P + + VCLS+
Sbjct: 37 NLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSI 94
Query: 462 LD-EEKDWRPAITIK 503
+ W P+ +I+
Sbjct: 95 SGYHPETWLPSWSIR 109
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +3
Query: 195 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 374
RL EE + +K G ++ +++ D + L W +I G TP+E +Y L++ +
Sbjct: 9 RLLEELEEGQKGKGDGNISWGLED-DSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGN 67
Query: 375 YPSSPPKCKFEPPLFHPNVYPS-GTVCLSLLDEEKDWRPAITIK 503
YP PP +F + V S G + L ++W + IK
Sbjct: 68 YPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRNWSNSYMIK 111
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +3
Query: 330 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD----EEKDWRP 488
+ GG ++ ++ +Y + PP K ++HPN+ G++CLS+L ++ WRP
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRP 128
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +3
Query: 306 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS 440
I G TP+E G++++ + F D+YP++ P+ KF+ +++ V PS
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPS 79
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +3
Query: 321 GTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAIT 497
G ++ ++ L + +YP PP KF ++HPNV P + +C +L +E +W+P T
Sbjct: 54 GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQE-NWKPETT 112
Query: 498 IK 503
++
Sbjct: 113 ME 114
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 288 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSP 389
+TW+ IPGK T W+ K++ +++DD + P
Sbjct: 1394 VTWKTKIPGKLLTAWK----KIKEMYRDDKITVP 1423
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 364 SKMIIHQVLQNANLNHHCSTPMCIHQVRCACHCLMKKKIGVQQS 495
SK II ++ A+ H S+ IH+ A +CL+ K++ V+ S
Sbjct: 275 SKQIIKFAMEIASGMKHLSSKNVIHRDLAARNCLITKELNVKIS 318
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 364 SKMIIHQVLQNANLNHHCSTPMCIHQVRCACHCLMKKKIGVQQS 495
SK II ++ A+ H S+ IH+ A +CL+ K++ V+ S
Sbjct: 275 SKQIIKFAMEIASGMKHLSSKNVIHRDLAARNCLITKELNVKIS 318
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 288 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSP 389
+TW+ IPGK T W+ K++ +++DD + P
Sbjct: 1394 VTWKTKIPGKLLTAWK----KIKEMYRDDKITVP 1423
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,325,144
Number of Sequences: 27780
Number of extensions: 282653
Number of successful extensions: 736
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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