BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26g12
(557 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83856-4|CAI18778.1| 1594|Homo sapiens DEP domain containing 5 p... 148 1e-35
Z83856-3|CAI18779.1| 1572|Homo sapiens DEP domain containing 5 p... 148 1e-35
Z83856-2|CAI18777.1| 1552|Homo sapiens DEP domain containing 5 p... 148 1e-35
Z82190-4|CAI19699.1| 1594|Homo sapiens DEP domain containing 5 p... 148 1e-35
Z82190-3|CAI19698.1| 1572|Homo sapiens DEP domain containing 5 p... 148 1e-35
Z82190-2|CAI19697.1| 1552|Homo sapiens DEP domain containing 5 p... 148 1e-35
BC146766-1|AAI46767.1| 1572|Homo sapiens DEP domain containing 5... 148 1e-35
BC057797-1|AAH57797.1| 559|Homo sapiens DEP domain containing 5... 148 1e-35
AL022331-6|CAI17976.1| 1594|Homo sapiens DEP domain containing 5... 148 1e-35
AL022331-5|CAI17975.1| 1572|Homo sapiens DEP domain containing 5... 148 1e-35
AL022331-4|CAI17974.1| 1552|Homo sapiens DEP domain containing 5... 148 1e-35
AL022331-3|CAI17973.1| 559|Homo sapiens DEP domain containing 5... 148 1e-35
AJ704764-1|CAG28924.1| 1572|Homo sapiens DEP domain containing 5... 148 1e-35
AJ698951-1|CAG27890.1| 1503|Homo sapiens DEPDC5 protein variant ... 148 1e-35
AJ698950-1|CAG27889.1| 1594|Homo sapiens DEPDC5 protein variant ... 148 1e-35
AC005004-1|AAD08635.1| 441|Homo sapiens WUGSC:H_DJ403E2.1 protein. 148 1e-35
AB014545-1|BAA31620.2| 1578|Homo sapiens KIAA0645 protein protein. 148 1e-35
>Z83856-4|CAI18778.1| 1594|Homo sapiens DEP domain containing 5
protein.
Length = 1594
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>Z83856-3|CAI18779.1| 1572|Homo sapiens DEP domain containing 5
protein.
Length = 1572
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>Z83856-2|CAI18777.1| 1552|Homo sapiens DEP domain containing 5
protein.
Length = 1552
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>Z82190-4|CAI19699.1| 1594|Homo sapiens DEP domain containing 5
protein.
Length = 1594
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>Z82190-3|CAI19698.1| 1572|Homo sapiens DEP domain containing 5
protein.
Length = 1572
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>Z82190-2|CAI19697.1| 1552|Homo sapiens DEP domain containing 5
protein.
Length = 1552
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>BC146766-1|AAI46767.1| 1572|Homo sapiens DEP domain containing 5
protein.
Length = 1572
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>BC057797-1|AAH57797.1| 559|Homo sapiens DEP domain containing 5
protein.
Length = 559
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>AL022331-6|CAI17976.1| 1594|Homo sapiens DEP domain containing 5
protein.
Length = 1594
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>AL022331-5|CAI17975.1| 1572|Homo sapiens DEP domain containing 5
protein.
Length = 1572
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>AL022331-4|CAI17974.1| 1552|Homo sapiens DEP domain containing 5
protein.
Length = 1552
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>AL022331-3|CAI17973.1| 559|Homo sapiens DEP domain containing 5
protein.
Length = 559
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>AJ704764-1|CAG28924.1| 1572|Homo sapiens DEP domain containing 5
variant 1 (DEPDC5_v1) protein.
Length = 1572
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>AJ698951-1|CAG27890.1| 1503|Homo sapiens DEPDC5 protein variant 3
protein.
Length = 1503
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>AJ698950-1|CAG27889.1| 1594|Homo sapiens DEPDC5 protein variant 1
protein.
Length = 1594
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>AC005004-1|AAD08635.1| 441|Homo sapiens WUGSC:H_DJ403E2.1 protein.
Length = 441
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 3 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 62
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 63 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 121
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 122 VSTCAYITQKVEFAG 136
>AB014545-1|BAA31620.2| 1578|Homo sapiens KIAA0645 protein protein.
Length = 1578
Score = 148 bits (359), Expect = 1e-35
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 145 TMKSFKLIVHQSSF--SPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPG 318
T K +KL++H+ F S ++L++N K +P +K DIVEI HP ++Y LLLQV +
Sbjct: 9 TTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDL 68
Query: 319 RGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNHL 498
+ ++TISV+Q++ F+LR + DVYVN+V+ +DV LD VELTFKDQY+GR +MWRLK L
Sbjct: 69 Q-KETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL 127
Query: 499 VSTCVYLNQKIEYCG 543
VSTC Y+ QK+E+ G
Sbjct: 128 VSTCAYITQKVEFAG 142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,060,209
Number of Sequences: 237096
Number of extensions: 1678817
Number of successful extensions: 3094
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3059
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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