Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26g12
(557 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-272|AAF47505.2| 1544|Drosophila melanogaster CG12090-PA... 137 8e-33
AE014296-271|AAN11486.1| 1472|Drosophila melanogaster CG12090-PC... 137 8e-33
AE014296-270|AAN11485.1| 1471|Drosophila melanogaster CG12090-PB... 137 8e-33
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB... 33 0.35
AY070873-1|AAL48495.1| 92|Drosophila melanogaster LD06106p pro... 32 0.46
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC... 31 0.80
BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p pro... 30 2.4
BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p pro... 30 2.4
S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ... 29 5.6
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA... 29 5.6
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti... 29 5.6
BT022134-1|AAY51529.1| 543|Drosophila melanogaster IP08802p pro... 28 9.8
AE014134-2970|AAF53700.1| 530|Drosophila melanogaster CG10348-P... 28 9.8
>AE014296-272|AAF47505.2| 1544|Drosophila melanogaster CG12090-PA,
isoform A protein.
Length = 1544
Score = 137 bits (332), Expect = 8e-33
Identities = 70/140 (50%), Positives = 94/140 (67%), Gaps = 4/140 (2%)
Frame = +1
Query: 148 MKSFKLIVHQSSFSPE---DLIINLKDYPGLKEKDIVEIYHP-ENDYPRLLLQVTKVDAP 315
MK +KL H + DL++NLKD+P D+VEIY P E + LLLQ+T+ +
Sbjct: 1 MKLYKLNTHTRGCNKSYDADLVMNLKDHPNANVGDVVEIYAPDEENGTHLLLQITEFNG- 59
Query: 316 GRGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNH 495
GRD IS+E IA F++R +++V + IV DVALDS+E+TFKDQY+GRSEMWRLK +
Sbjct: 60 SCGRDVISIESGIANAFKMRPYSNVVMRIVKPADVALDSIEITFKDQYMGRSEMWRLKTY 119
Query: 496 LVSTCVYLNQKIEYCGGAIR 555
L TCVY+N+KI+Y IR
Sbjct: 120 LTDTCVYVNKKIDYNDMQIR 139
>AE014296-271|AAN11486.1| 1472|Drosophila melanogaster CG12090-PC,
isoform C protein.
Length = 1472
Score = 137 bits (332), Expect = 8e-33
Identities = 70/140 (50%), Positives = 94/140 (67%), Gaps = 4/140 (2%)
Frame = +1
Query: 148 MKSFKLIVHQSSFSPE---DLIINLKDYPGLKEKDIVEIYHP-ENDYPRLLLQVTKVDAP 315
MK +KL H + DL++NLKD+P D+VEIY P E + LLLQ+T+ +
Sbjct: 1 MKLYKLNTHTRGCNKSYDADLVMNLKDHPNANVGDVVEIYAPDEENGTHLLLQITEFNG- 59
Query: 316 GRGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNH 495
GRD IS+E IA F++R +++V + IV DVALDS+E+TFKDQY+GRSEMWRLK +
Sbjct: 60 SCGRDVISIESGIANAFKMRPYSNVVMRIVKPADVALDSIEITFKDQYMGRSEMWRLKTY 119
Query: 496 LVSTCVYLNQKIEYCGGAIR 555
L TCVY+N+KI+Y IR
Sbjct: 120 LTDTCVYVNKKIDYNDMQIR 139
>AE014296-270|AAN11485.1| 1471|Drosophila melanogaster CG12090-PB,
isoform B protein.
Length = 1471
Score = 137 bits (332), Expect = 8e-33
Identities = 70/140 (50%), Positives = 94/140 (67%), Gaps = 4/140 (2%)
Frame = +1
Query: 148 MKSFKLIVHQSSFSPE---DLIINLKDYPGLKEKDIVEIYHP-ENDYPRLLLQVTKVDAP 315
MK +KL H + DL++NLKD+P D+VEIY P E + LLLQ+T+ +
Sbjct: 1 MKLYKLNTHTRGCNKSYDADLVMNLKDHPNANVGDVVEIYAPDEENGTHLLLQITEFNG- 59
Query: 316 GRGRDTISVEQSIATTFQLRTFADVYVNIVNVQDVALDSVELTFKDQYLGRSEMWRLKNH 495
GRD IS+E IA F++R +++V + IV DVALDS+E+TFKDQY+GRSEMWRLK +
Sbjct: 60 SCGRDVISIESGIANAFKMRPYSNVVMRIVKPADVALDSIEITFKDQYMGRSEMWRLKTY 119
Query: 496 LVSTCVYLNQKIEYCGGAIR 555
L TCVY+N+KI+Y IR
Sbjct: 120 LTDTCVYVNKKIDYNDMQIR 139
>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
isoform B protein.
Length = 2129
Score = 32.7 bits (71), Expect = 0.35
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +1
Query: 175 QSSFSPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPGRGRDTISVEQSI 354
Q+ F EDL + D +E+D E+ EN+ +L Q +++AP D + ++I
Sbjct: 1832 QAYFLDEDLQCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINAPADAMDGMFDPKNI 1891
Query: 355 ATTFQLRT--FADVYVNIVNVQDVALDSVELTFKDQYLGRSE 474
T L A+ + + Q VA V+L+ Y + +
Sbjct: 1892 KTEIDLEAHQMAEEPIGEDDSQQVAEAMVQLSGVGGYYAQQQ 1933
>AY070873-1|AAL48495.1| 92|Drosophila melanogaster LD06106p
protein.
Length = 92
Score = 32.3 bits (70), Expect = 0.46
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +3
Query: 207 QLERLSRVKGKRYSRNLSSRK*LPPIITTSYKSGRPRTRQRYN*CGTKYCYHFPTPNVC* 386
Q R S++ Y + + PPI +T + RPR R+ Y C HF + +
Sbjct: 2 QCSRFSKICSNLYRNRTKAPRFSPPISSTLH---RPR-RRNYRPCPITITSHFNSSSSNS 57
Query: 387 CLCKYSQCARCGFGFSGINIQRPISR 464
C C + RC S NI S+
Sbjct: 58 CCCPTTSAMRCSSSSSN-NISNSSSK 82
>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
isoform C protein.
Length = 2098
Score = 31.5 bits (68), Expect = 0.80
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 175 QSSFSPEDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPGRGRDTISVEQSI 354
Q+ F EDL + D +E+D E+ EN+ +L Q +++AP D + ++I
Sbjct: 1832 QAYFLDEDLQCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINAPADAMDGMFDPKNI 1891
Query: 355 ATTFQL 372
T L
Sbjct: 1892 KTEIDL 1897
>BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p protein.
Length = 1964
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 193 EDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPGRGRDTISVEQSIATTFQL 372
EDL + D +E+D E+ EN+ +L Q +++AP D + ++I T L
Sbjct: 1805 EDLQCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINAPADAMDGMFDPKNIKTEIDL 1864
Query: 373 RT--FADVYVNIVNVQDVALDSVELTFKDQYLGRSE 474
A+ + + Q VA V+L+ Y + +
Sbjct: 1865 EAHQMAEEPIGEDDSQQVAEAMVQLSGVGGYYAQQQ 1900
>BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p protein.
Length = 2096
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 193 EDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPGRGRDTISVEQSIATTFQL 372
EDL + D +E+D E+ EN+ +L Q +++AP D + ++I T L
Sbjct: 1805 EDLQCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINAPADAMDGMFDPKNIKTEIDL 1864
Query: 373 RT--FADVYVNIVNVQDVALDSVELTFKDQYLGRSE 474
A+ + + Q VA V+L+ Y + +
Sbjct: 1865 EAHQMAEEPIGEDDSQQVAEAMVQLSGVGGYYAQQQ 1900
>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
factor TFIID 230kda subunit protein.
Length = 2068
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 193 EDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPGRGRDTISVEQSIATTFQL 372
EDL + D +E+D E+ EN+ +L Q +++AP D + ++I T L
Sbjct: 1808 EDLQCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINAPADAMDGMFDPKNIKTEIDL 1867
>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
isoform A protein.
Length = 2065
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 193 EDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPGRGRDTISVEQSIATTFQL 372
EDL + D +E+D E+ EN+ +L Q +++AP D + ++I T L
Sbjct: 1805 EDLQCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINAPADAMDGMFDPKNIKTEIDL 1864
>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
factor protein.
Length = 2065
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 193 EDLIINLKDYPGLKEKDIVEIYHPENDYPRLLLQVTKVDAPGRGRDTISVEQSIATTFQL 372
EDL + D +E+D E+ EN+ +L Q +++AP D + ++I T L
Sbjct: 1805 EDLQCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINAPADAMDGMFDPKNIKTEIDL 1864
>BT022134-1|AAY51529.1| 543|Drosophila melanogaster IP08802p
protein.
Length = 543
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 10 CSLPAVHGVCLFVLHAYLPLMFTNI 84
CS+PAVH L + LPL + N+
Sbjct: 195 CSIPAVHPTLLEAMTKNLPLQYRNV 219
>AE014134-2970|AAF53700.1| 530|Drosophila melanogaster CG10348-PA
protein.
Length = 530
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 10 CSLPAVHGVCLFVLHAYLPLMFTNI 84
CS+PAVH L + LPL + N+
Sbjct: 182 CSIPAVHPTLLEAMTKNLPLQYRNV 206
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,212,892
Number of Sequences: 53049
Number of extensions: 508474
Number of successful extensions: 1371
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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