Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26f11
         (523 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    32   0.41 
AY069208-1|AAL39353.1|  374|Drosophila melanogaster GH26152p pro...    31   1.3  
AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    31   1.3  
BT024967-1|ABE01197.1|  604|Drosophila melanogaster IP15225p pro...    28   6.7  
BT024335-1|ABC86397.1|  257|Drosophila melanogaster IP09958p pro...    28   6.7  
AY051963-1|AAK93387.1|  448|Drosophila melanogaster LD43003p pro...    28   6.7  
AE014298-1624|AAS65315.1|  448|Drosophila melanogaster CG1745-PA...    28   6.7  
AE014298-1623|AAF48046.1|  837|Drosophila melanogaster CG1745-PB...    28   6.7  
AE013599-1467|AAF58524.2|  259|Drosophila melanogaster CG30042-P...    28   6.7  

>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
           protein.
          Length = 2284

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
 Frame = +3

Query: 339 SCSCAPR*PTRRSCKIGFTNTCCPSAPPDSRR*AC---SKTPKRQ-*SLIPLPSRAISMR 506
           SC+  P+  +  SC +G T+  C  APP +++  C   S+ P+ Q  + +P  +R  S +
Sbjct: 381 SCNETPQTTSLPSCPLGSTDPRCRVAPPATKKPRCFSGSRDPECQPATYLPPTTRRSSTK 440

Query: 507 PR 512
           PR
Sbjct: 441 PR 442


>AY069208-1|AAL39353.1|  374|Drosophila melanogaster GH26152p
           protein.
          Length = 374

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +2

Query: 407 PQCTARQSALSLLQDAQATVKFNSAPVEGHFYAATTLL 520
           P  T   +  S+L  AQ    F+  P  GHF AA TLL
Sbjct: 287 PAATTLSTVNSILSTAQKLHMFDDKPKGGHFNAAPTLL 324


>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
            protein.
          Length = 3146

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +2

Query: 407  PQCTARQSALSLLQDAQATVKFNSAPVEGHFYAATTLL 520
            P  T   +  S+L  AQ    F+  P  GHF AA TLL
Sbjct: 3059 PAATTLSTVNSILSTAQKLHMFDDKPKGGHFNAAPTLL 3096


>BT024967-1|ABE01197.1|  604|Drosophila melanogaster IP15225p
           protein.
          Length = 604

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 183 TPKKQLEITSTASTNAHSSKRVLISAKKNTLNKAIR 290
           +PKKQ   +STA TN H    +   AKK  LN ++R
Sbjct: 205 SPKKQK--SSTAQTNFHIKVPLQNGAKKRALNHSLR 238


>BT024335-1|ABC86397.1|  257|Drosophila melanogaster IP09958p
           protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 370 GGAAKLVLRTRVAPVHRPTVGVEPAPRRPS 459
           GGAA +V RT   P  RPT    PA   P+
Sbjct: 112 GGAAVVVPRTSARPQPRPTTAAPPAIADPT 141


>AY051963-1|AAK93387.1|  448|Drosophila melanogaster LD43003p
           protein.
          Length = 448

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 183 TPKKQLEITSTASTNAHSSKRVLISAKKNTLNKAIR 290
           +PKKQ   +STA TN H    +   AKK  LN ++R
Sbjct: 205 SPKKQK--SSTAQTNFHIKVPLQNGAKKRALNHSLR 238


>AE014298-1624|AAS65315.1|  448|Drosophila melanogaster CG1745-PA,
           isoform A protein.
          Length = 448

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 183 TPKKQLEITSTASTNAHSSKRVLISAKKNTLNKAIR 290
           +PKKQ   +STA TN H    +   AKK  LN ++R
Sbjct: 205 SPKKQK--SSTAQTNFHIKVPLQNGAKKRALNHSLR 238


>AE014298-1623|AAF48046.1|  837|Drosophila melanogaster CG1745-PB,
           isoform B protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 183 TPKKQLEITSTASTNAHSSKRVLISAKKNTLNKAIR 290
           +PKKQ   +STA TN H    +   AKK  LN ++R
Sbjct: 205 SPKKQK--SSTAQTNFHIKVPLQNGAKKRALNHSLR 238


>AE013599-1467|AAF58524.2|  259|Drosophila melanogaster CG30042-PA
           protein.
          Length = 259

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 370 GGAAKLVLRTRVAPVHRPTVGVEPAPRRPS 459
           GGAA +V RT   P  RPT    PA   P+
Sbjct: 114 GGAAVVVPRTSARPQPRPTTAAPPAIADPT 143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,847,750
Number of Sequences: 53049
Number of extensions: 472416
Number of successful extensions: 1467
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)