Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26f08
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 99 2e-21
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 73 1e-13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 73 1e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 62 3e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 62 3e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 62 3e-10
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 60 7e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 54 5e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 54 5e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 54 5e-08
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 40 0.001
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 40 0.001
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 40 0.001
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.003
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.003
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.006
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.006
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.007
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 37 0.010
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 37 0.010
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 36 0.022
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 36 0.022
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 36 0.022
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.022
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.052
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.052
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 34 0.069
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.091
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.28
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 32 0.28
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 31 0.37
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.64
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 0.64
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 0.85
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 0.85
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 0.85
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 30 1.1
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 30 1.1
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 1.1
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 30 1.1
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 1.5
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 2.0
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 2.6
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 29 2.6
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 27 6.0
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 27 6.0
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 27 6.0
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 27 7.9
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 27 7.9
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 27 7.9
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 27 7.9
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 27 7.9
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/116 (38%), Positives = 60/116 (51%)
Frame = +2
Query: 161 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG 340
S CY C TGHF+R+C +GG G C+ C GH++RDC G
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSE-GGSGG 93
Query: 341 TGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 508
G E +S CYNC ++GHI+R C E G + + CY C ++GHISR+CP
Sbjct: 94 YGGRGGE-GRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCP 147
Score = 61.3 bits (142), Expect = 4e-10
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Frame = +2
Query: 386 SCYNCNKTGHIARNCP----EGGRESAT--QTCYNCNKSGHISRNCPDG 514
+CY C + GHI+RNCP +GGR TCYNC ++GH SR+CP G
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKG 53
Score = 53.2 bits (122), Expect = 1e-07
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD 319
CY C R+GH +RECT+ G + + ++C++C TGH +RDC + +
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQCQETGHISRDCPSQTN 151
Score = 37.1 bits (82), Expect = 0.007
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 458 QTCYNCNKSGHISRNCPDG 514
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 72.9 bits (171), Expect = 1e-13
Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 337
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 338 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCP 508
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +2
Query: 275 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 448
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 449 SATQTCYNCNKSGHISRNC 505
C NC GH + +C
Sbjct: 613 VPRGPCRNCGIEGHFAVDC 631
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 328
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 329 RCNGTGHIARECAQSPDE 382
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 72.9 bits (171), Expect = 1e-13
Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 337
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 338 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCP 508
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +2
Query: 275 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 448
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 449 SATQTCYNCNKSGHISRNC 505
C NC GH + +C
Sbjct: 613 VPRGPCRNCGIEGHFAVDC 631
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 328
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 329 RCNGTGHIARECAQSPDE 382
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 61.7 bits (143), Expect = 3e-10
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Frame = +2
Query: 164 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFKCNRTGHFARDCKEE 313
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 314 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCN 478
+ + N G + Q E + C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 479 KSGHISRNCPD 511
+ GH SR+CP+
Sbjct: 403 QPGHNSRDCPE 413
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 164 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 328
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 329 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 433
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 5e-09
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2
Query: 386 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 54.8 bits (126), Expect = 3e-08
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 15/130 (11%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 343
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 344 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 481
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 482 SGHISRNCPD 511
GH S CP+
Sbjct: 481 QGHRSNECPN 490
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Frame = +2
Query: 251 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 394
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 395 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPD 511
G EG E C+NC GH S CP+
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 46.8 bits (106), Expect = 9e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 281 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 451
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 452 ATQTCYNCNKSG 487
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 251 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 370
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 37.9 bits (84), Expect = 0.004
Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 22/137 (16%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 337
C+ C + GH + +C + R+ C+ C + GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 338 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 460
GTG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 461 TCYNCNKSGHISRNCPD 511
C+NC + GH S +CP+
Sbjct: 372 NCFNCQQPGHRSNDCPE 388
Score = 29.5 bits (63), Expect = 1.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 443 RESATQTCYNCNKSGHISRNCPD 511
R C+NC + GH S +CP+
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPE 274
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 61.7 bits (143), Expect = 3e-10
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Frame = +2
Query: 164 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFKCNRTGHFARDCKEE 313
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 314 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCN 478
+ + N G + Q E + C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 479 KSGHISRNCPD 511
+ GH SR+CP+
Sbjct: 403 QPGHNSRDCPE 413
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 164 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 328
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 329 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 433
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 5e-09
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2
Query: 386 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 54.8 bits (126), Expect = 3e-08
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 15/130 (11%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 343
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 344 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 481
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 482 SGHISRNCPD 511
GH S CP+
Sbjct: 481 QGHRSNECPN 490
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Frame = +2
Query: 251 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 394
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 395 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPD 511
G EG E C+NC GH S CP+
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 46.8 bits (106), Expect = 9e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 281 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 451
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 452 ATQTCYNCNKSG 487
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 251 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 370
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 37.9 bits (84), Expect = 0.004
Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 22/137 (16%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 337
C+ C + GH + +C + R+ C+ C + GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 338 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 460
GTG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 461 TCYNCNKSGHISRNCPD 511
C+NC + GH S +CP+
Sbjct: 372 NCFNCQQPGHRSNDCPE 388
Score = 29.5 bits (63), Expect = 1.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 443 RESATQTCYNCNKSGHISRNCPD 511
R C+NC + GH S +CP+
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPE 274
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 61.7 bits (143), Expect = 3e-10
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Frame = +2
Query: 164 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFKCNRTGHFARDCKEE 313
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 314 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCN 478
+ + N G + Q E + C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 479 KSGHISRNCPD 511
+ GH SR+CP+
Sbjct: 403 QPGHNSRDCPE 413
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 164 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 328
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 329 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 433
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 5e-09
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2
Query: 386 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 54.8 bits (126), Expect = 3e-08
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 15/130 (11%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 343
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 344 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 481
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 482 SGHISRNCPD 511
GH S CP+
Sbjct: 481 QGHRSNECPN 490
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Frame = +2
Query: 251 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 394
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 395 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPD 511
G EG E C+NC GH S CP+
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 46.8 bits (106), Expect = 9e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 281 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 451
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 452 ATQTCYNCNKSG 487
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 251 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 370
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 37.9 bits (84), Expect = 0.004
Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 22/137 (16%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 337
C+ C + GH + +C + R+ C+ C + GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 338 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 460
GTG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 461 TCYNCNKSGHISRNCPD 511
C+NC + GH S +CP+
Sbjct: 372 NCFNCQQPGHRSNDCPE 388
Score = 29.5 bits (63), Expect = 1.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 443 RESATQTCYNCNKSGHISRNCPD 511
R C+NC + GH S +CP+
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPE 274
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 60.5 bits (140), Expect = 7e-10
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Frame = +2
Query: 152 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR--- 322
++ S C+ C GH +C + S D CFKC H +CK++ +
Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGFP 278
Query: 323 ---CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRESA 454
C+ C GHI+R+C Q+ PD C C H+ R+CPE + A
Sbjct: 279 YATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPELAAQKA 330
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +2
Query: 215 GGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 385
G V D+ +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 386 SCYNCNKTGHIARNCPEGGRESATQ-TCYNCNKSGHISRNC 505
C+ C H C + G + TC+ C + GHISR+C
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDC 295
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.4 bits (125), Expect = 5e-08
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 386 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
+C+NC + GH + +CPE +E + CYNC + GH SR C +
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 52.8 bits (121), Expect = 1e-07
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Frame = +2
Query: 239 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SPDEPSC-- 391
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 392 --------YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
N G GG E C+NC GH S CP+
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
Score = 51.6 bits (118), Expect = 3e-07
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 343
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 344 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 475
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 476 NKSGHISRNCPD 511
+ GH S CP+
Sbjct: 268 GEQGHRSNECPN 279
Score = 47.2 bits (107), Expect = 7e-06
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +2
Query: 164 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 262
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 263 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 385
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.4 bits (125), Expect = 5e-08
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 386 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
+C+NC + GH + +CPE +E + CYNC + GH SR C +
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 52.8 bits (121), Expect = 1e-07
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Frame = +2
Query: 239 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SPDEPSC-- 391
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 392 --------YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
N G GG E C+NC GH S CP+
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
Score = 51.6 bits (118), Expect = 3e-07
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 343
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 344 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 475
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 476 NKSGHISRNCPD 511
+ GH S CP+
Sbjct: 268 GEQGHRSNECPN 279
Score = 47.2 bits (107), Expect = 7e-06
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +2
Query: 164 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 262
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 263 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 385
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 54.4 bits (125), Expect = 5e-08
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 386 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
+C+NC + GH + +CPE +E + CYNC + GH SR C +
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 52.8 bits (121), Expect = 1e-07
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Frame = +2
Query: 239 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SPDEPSC-- 391
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 392 --------YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
N G GG E C+NC GH S CP+
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
Score = 51.6 bits (118), Expect = 3e-07
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 343
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 344 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 475
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 476 NKSGHISRNCPD 511
+ GH S CP+
Sbjct: 268 GEQGHRSNECPN 279
Score = 47.2 bits (107), Expect = 7e-06
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +2
Query: 164 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 262
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 263 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 385
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 257 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 421
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 422 RNCPE 436
NCP+
Sbjct: 688 WNCPK 692
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 314 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 484
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 485 GHISRNCP 508
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 158 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 334
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 628 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 680
Query: 335 NGTGHIARECAQSPDEPS 388
N GHIA C + + S
Sbjct: 681 NEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 257 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 421
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 422 RNCPE 436
NCP+
Sbjct: 591 WNCPK 595
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 314 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 484
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 485 GHISRNCP 508
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 158 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 334
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 531 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 583
Query: 335 NGTGHIARECAQSPDEPS 388
N GHIA C + + S
Sbjct: 584 NEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 257 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 421
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 422 RNCPE 436
NCP+
Sbjct: 602 WNCPK 606
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 314 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 484
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 485 GHISRNCP 508
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 158 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 334
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 542 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 594
Query: 335 NGTGHIARECAQSPDEPS 388
N GHIA C + + S
Sbjct: 595 NEMGHIAWNCPKKNENTS 612
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 503 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNTTARPGSVRTRALCAPCRYIC 327
S G CG+TCC APP S CG P C C V T C C+ +C
Sbjct: 70 SMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCKCCQPVC 118
Query: 326 SNGQPLPCNPSQSVLCGCT 270
+N C CGCT
Sbjct: 119 TNA----CTNGGGCSCGCT 133
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 263 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 367
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.9 bits (74), Expect = 0.069
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +2
Query: 314 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 469
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 33.9 bits (74), Expect = 0.069
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 386 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 505
+C+NC K GH A C RE C NC H + C
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANEC 237
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 158 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 304
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 263 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 367
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.9 bits (74), Expect = 0.069
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +2
Query: 314 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 469
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 33.9 bits (74), Expect = 0.069
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 386 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 505
+C+NC K GH A C RE C NC H + C
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANEC 237
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 158 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 304
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 389 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 505
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.017
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 284 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 439
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCK 307
C C H + EC V+ KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQI-------KCTNCGAFGHISKDCK 469
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 389 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 505
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.017
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 284 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 439
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCK 307
C C H + EC V+ KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQI-------KCTNCGAFGHISKDCK 469
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.007
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 458 QTCYNCNKSGHISRNCPDG 514
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.022
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 386 SCYNCNKTGHIARNCPEG 439
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.28
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 152 MSSSVCYKCNRTGHFARECTQG 217
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 263 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 352
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 314 ADR-CYRCNGTGHIAREC 364
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +2
Query: 293 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 472
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 473 CNKSGHISRNCPDG 514
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 35.1 bits (77), Expect = 0.030
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +2
Query: 263 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 427
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 428 CPEGGRESATQTCY 469
C +G + T +
Sbjct: 265 CHKGALAFLSNTAH 278
Score = 31.9 bits (69), Expect = 0.28
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Frame = +2
Query: 125 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR-------EK------- 262
A +KP + C+ C+ GH A C +R + + R +K
Sbjct: 192 AVSHAKPTYSQAITCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVT 251
Query: 263 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 361
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 36.7 bits (81), Expect = 0.010
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Frame = +2
Query: 200 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 379
R C Q + + GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 380 E----PSCYNCNKTGHIARNCPEGGRESATQTCYNCN--KSGHISRNCPDG 514
P C C H A C + ++ C C +GH C DG
Sbjct: 882 GFWGFPECRTCQCNDH-ANIC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 35.5 bits (78), Expect = 0.022
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 320 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 448
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 389 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 113 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 152
Score = 31.1 bits (67), Expect = 0.48
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 260 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 370
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.022
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 320 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 448
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 389 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
Score = 31.1 bits (67), Expect = 0.48
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 260 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 370
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.022
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 320 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 448
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 389 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
Score = 31.1 bits (67), Expect = 0.48
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 260 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 370
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.022
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 320 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 448
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 389 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 511
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
Score = 31.1 bits (67), Expect = 0.48
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 260 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 370
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.022
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +2
Query: 323 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 487
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.21
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 383 PSCYNCNKTGHIARNCPEGGRES 451
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 259
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
Score = 28.7 bits (61), Expect = 2.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 464 CYNCNKSGHISRNCP 508
CY C GH+S++CP
Sbjct: 313 CYKCKVVGHVSKDCP 327
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 95 LNDRYISVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFK 271
++D +I + Q+ SK I ++ + R F +DS R C+K
Sbjct: 262 VHDEWIRYIQTQQQSKVITVTPA------RHPKFEVNQVDADDKKKDSRKGNYRPPYCYK 315
Query: 272 CNRTGHFARDCKEEA 316
C GH ++DC + +
Sbjct: 316 CKVVGHVSKDCPQSS 330
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.052
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 323 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 502
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.052
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 323 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 502
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 33.9 bits (74), Expect = 0.069
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -3
Query: 512 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNTTARPGSVRTRA 354
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 353 LCAPCRYICSNGQPLP 306
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
Score = 30.3 bits (65), Expect = 0.85
Identities = 25/112 (22%), Positives = 37/112 (33%)
Frame = -3
Query: 503 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPCRYICS 324
S C +C + SA T + C SC SC+ + + PC C+
Sbjct: 172 SSRNCQNSCQNQCSSACTTMTCRQTCQNTCLGSCNSCSGGGCNSNNSNLVVVTPCERSCN 231
Query: 323 NGQPLPCNPSQSVLCGCT*STSHVADXXXXXXXXXXXACIRARNARSGCTCS 168
+G C+ S S L C + C + S C+CS
Sbjct: 232 SGCRSTCS-STSTLSVCIPACQQTCRSTCSTAKTFVIPCTSGTSGNS-CSCS 281
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.091
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 5/82 (6%)
Frame = -3
Query: 503 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSC---CS--CNTTARPGSVRTRALCAPC 339
+C +C +C + + + +C P C C C T A C
Sbjct: 231 NCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290
Query: 338 RYICSNGQPLPCNPSQSVLCGC 273
C+ + C P Q+ CGC
Sbjct: 291 NQSCNQPAQMACQPMQNSQCGC 312
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 350 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 514
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 31.1 bits (67), Expect = 0.48
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +2
Query: 200 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 379
R+C QG + +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGSAPT-----DRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 380 EPSCYNCNKTGHIARNCPEGG 442
S Y N +G +N EGG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVV--SRDSGFNRQREKCFKCNRTGHFARDCKEEADR 322
C++C+R GHF C Q + +R + ++ N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +2
Query: 374 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 508
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +2
Query: 158 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 322
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +2
Query: 323 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 436
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 0.28
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +2
Query: 161 SVCYKCNRTGHFAR--ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 334
S C C+ T H R EC R+ CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 335 NGTGH 349
G H
Sbjct: 371 KGNHH 375
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.37
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 500 CGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAP 342
C +C TC ++ Q AP ++ P C C TT + + + CAP
Sbjct: 174 CQQCQNTCQQFAPVCQQQCAP--QCTISSAPQCQQCQTTCQQFAPVCQQQCAP 224
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.64
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = -3
Query: 503 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-AP 342
S +C TC S S+ TP P + V+C PSC +C + P +V+ C
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQ 158
Query: 341 CRYICSNGQPL-PCNPSQSVLC 279
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 0.64
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Frame = -3
Query: 485 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSC----NTTARPGSVRTRALCA-PCRY--- 333
RTCC A+ P PP P+ CC T R G C PC Y
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 332 --ICSNGQPLPCNPSQ 291
C+ GQ C P Q
Sbjct: 190 PTCCNQGQKACCPPEQ 205
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 30.3 bits (65), Expect = 0.85
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Frame = +2
Query: 185 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 349
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 350 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNC 505
+ + P+ CY C N G +C G + C +C S S+ C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYC 2000
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 30.3 bits (65), Expect = 0.85
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Frame = +2
Query: 185 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 349
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 350 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNC 505
+ + P+ CY C N G +C G + C +C S S+ C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYC 2000
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 30.3 bits (65), Expect = 0.85
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Frame = +2
Query: 185 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 349
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 350 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNC 505
+ + P+ CY C N G +C G + C +C S S+ C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYC 2000
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 30.3 bits (65), Expect = 0.85
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Frame = +2
Query: 185 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 349
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 350 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNC 505
+ + P+ CY C N G +C G + C +C S S+ C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYC 2000
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Frame = -3
Query: 500 CG--RCGRTCCSYSRSASQTPAPPRDSSVRCGPS-----CCSCNTTARPGSVRTRALCAP 342
CG R +CC Y A P PP +S CGPS CC P
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPP-PASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
Query: 341 CRYICSNGQPLPCNP 297
+C P+P NP
Sbjct: 130 SPLVCCKQAPVPENP 144
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Frame = -3
Query: 503 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-AP 342
S +C TC S S+ TP P + V+C PSC +C + P V+ C
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQ 158
Query: 341 CRYICSNGQPL-PCNPSQSVLC 279
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Frame = -3
Query: 494 RCGRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNTTARPGSVRTRALCAP-CRYIC-S 324
+C C ++ PP SS C SC C A C P C+ C S
Sbjct: 292 KCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMPQCTPQCVQQQTICAAACQPSCQSSCSS 351
Query: 323 NGQPL-PCNPSQSVLC 279
N Q + C PS C
Sbjct: 352 NAQCVQACLPSCESSC 367
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 274
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 248 RQREKCFKCNRTGHFARDCKEEA 316
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
Score = 27.1 bits (57), Expect = 7.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 389 CYNCNKTGHIARNC 430
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 485 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA 354
RTCC SA+ P+ S + C P CNT AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 1.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 464 CYNCNKSGHISRNCP 508
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 3.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 389 CYNCNKTGHIARNCPE 436
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 293 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 436
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 29.1 bits (62), Expect = 2.0
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Frame = -3
Query: 503 SCGR-CGRTC-------CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRAL 351
SC R C R C S S++ +QTP + G C S C+ T R S R
Sbjct: 122 SCNRSCSRVCQSNPSASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTCR-SSCSNRVS 180
Query: 350 CAPCRYICSNGQPLPCNPSQS 288
+ C C N C PSQS
Sbjct: 181 QSTCDATCQNTCSSMC-PSQS 200
Score = 27.1 bits (57), Expect = 7.9
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -3
Query: 494 RCGRTCCSYSRSA--SQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA-LCAPC--RYI 330
RC C S + A +Q APP +C P C S T+ P R A L P +
Sbjct: 331 RCSSECQSVCQLACVTQKSAPPSSCLDKCSPQCDSACTS--PQVQRNSAQLFTPSADQAP 388
Query: 329 CSNGQPLPCNPSQSVL 282
S+ QP+ N S + L
Sbjct: 389 ASSAQPIKINISLAPL 404
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = -3
Query: 476 CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRALCAPCRYICSNGQPLPCN 300
C R+ Q+ R P+C S C+ G T CR C G PCN
Sbjct: 466 CPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TPGKNHHCREKCHEGPCPPCN 522
Query: 299 PSQSVLCGC 273
+ SV+C C
Sbjct: 523 LNTSVICRC 531
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 308 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 415
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 167 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 343
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 344 GHIARECAQSPDEPS 388
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -3
Query: 512 RRDSCGRCGRTCCSYSRSASQTPAP-PRDSSVR-CGPSCCSCNTTARPGSVRTRALCAPC 339
R+ C R G S + SQ+P R+ + R CG SC TT RP + + + C
Sbjct: 88 RQAQCSRPGTGFGSSTPFPSQSPQRCGRNETFRTCGSSCEPSCTTPRPQACTMQCIVNVC 147
Query: 338 RYICSNG 318
+ CS G
Sbjct: 148 Q--CSEG 152
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 440 GRESATQTCYNCNKSGHISRNCP 508
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 440 GRESATQTCYNCNKSGHISRNCP 508
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 4.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3
Query: 500 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 414
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 436
E C NR+G + D + D C + + D C C K+ H+ +C
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112
Query: 437 GGRESATQ-TCYNCNK 481
S C +C +
Sbjct: 113 SDVSSLNNFVCISCRR 128
>Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical
protein F46B3.2 protein.
Length = 190
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -3
Query: 503 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPG 372
SCG C + + + S T P +++ C S C+ A+ G
Sbjct: 124 SCGLCTGNVTTPATTTSTTTPVPLTTTIECKDSLLRCSEMAKKG 167
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 436
E C NR+G + D + D C + + D C C K+ H+ +C
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112
Query: 437 GGRESATQ-TCYNCNK 481
S C +C +
Sbjct: 113 SDVSSLNNFVCISCRR 128
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Frame = -3
Query: 491 CGRTCCSYSRSASQTPAPPRDSSVR------CGPSCCSCNTTARPGSVRTRALCAP-CRY 333
C C S++ PP S + C PSC T P + ++ CAP C+
Sbjct: 658 CDPQCISFTLKLPVMTTPPPTPSCQPQCQPACQPSCMETYTFTIPMNDQSSKQCAPACQP 717
Query: 332 ICSN 321
+C +
Sbjct: 718 VCDS 721
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -3
Query: 494 RCGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNTTARPGSVRTRALC-APCRYICSN 321
RC TC + + P P PR S+ C PSC P V+ +LC CR +C+N
Sbjct: 240 RCLPTCIQQIQISVPLPPPAPRCDSM-CMPSC-------SPSCVQQYSLCPQQCRPMCTN 291
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -3
Query: 482 TCCSYSRSASQTPAPPRDSSVRCGPSCCSCN--TTARPGSVRTRALC-APCRYICSNGQP 312
TCCS + + P PP D G N T + GS+ A+ PC IC G P
Sbjct: 103 TCCSCQQGPAGPPGPPGDDG-NGGQDGVRGNDGTDGKEGSLLESAIVNEPC-IICPPGPP 160
Query: 311 LP 306
P
Sbjct: 161 GP 162
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 27.5 bits (58), Expect = 6.0
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = -3
Query: 488 GRTCCSYSRSASQTPAPPRDS--SVRCG-PSCCSCNTTARPGSVRTRALCAPCRYICSNG 318
G CCS S P PP + R G P + T S R APC Y C G
Sbjct: 112 GGQCCSCKTGPSGPPGPPGEDGRDGRDGKPGLNGEDGTDAKDSAPRRDAAAPC-YDCPVG 170
Query: 317 QPLP 306
P P
Sbjct: 171 PPGP 174
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = -3
Query: 488 GRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCA 345
G C + S P C P CC C + A+PG A A
Sbjct: 13 GTLACFPTSQRSYQYGAPTQQFAACTPQCCGC-SQAQPGPQPAAAAAA 59
>Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical
protein F46B3.1 protein.
Length = 186
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -3
Query: 503 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPG 372
SCG C + + + S T P +++ C S C+ A+ G
Sbjct: 120 SCGLCTGNVTTPATTTSTTTPIPLTTTIECKDSLLRCSEMAKQG 163
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/50 (26%), Positives = 17/50 (34%)
Frame = +2
Query: 332 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNK 481
C I A +P E C NK + R C G + C+K
Sbjct: 77 CQSACGIPHVLASNPTEEVCEKWNKCDDVKRQCAAAGGNYYAGANFQCSK 126
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 251 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 418
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 419 ARNCPEG 439
+ P+G
Sbjct: 65 RKFGPKG 71
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 251 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 418
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 419 ARNCPEG 439
+ P+G
Sbjct: 65 RKFGPKG 71
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -3
Query: 416 CGPSCCSCNTTARPGSVRTRALCAPCRYICSNGQPLP---CNPSQSVLC 279
C P+C S N R R C P ++ Q +P C +QS+ C
Sbjct: 42 CPPTCESPNPQCRVDCTRPSCTCLPGHVYSNSRQCIPANSCYQTQSLRC 90
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Frame = -3
Query: 464 RSASQTPAPPRDSSVRCG-PSCC--SCNTTARPGSVRTRALC----APCRYICS-NGQPL 309
R + T P D +++ +CC C ++ ++ + C + CR + + NG+P+
Sbjct: 285 RKNAVTVVPKADVTMKSHIKACCVIGCEKSSNSKTIMCKTCCRSFHSGCREVETLNGKPI 344
Query: 308 PCNPSQSVLCG 276
P + +S +CG
Sbjct: 345 PDDQCESCVCG 355
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Frame = -3
Query: 464 RSASQTPAPPRDSSVRCG-PSCC--SCNTTARPGSVRTRALC----APCRYICS-NGQPL 309
R + T P D +++ +CC C ++ ++ + C + CR + + NG+P+
Sbjct: 285 RKNAVTVVPKADVTMKSHIKACCVIGCEKSSNSKTIMCKTCCRSFHSGCREVETLNGKPI 344
Query: 308 PCNPSQSVLCG 276
P + +S +CG
Sbjct: 345 PDDQCESCVCG 355
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,851,855
Number of Sequences: 27780
Number of extensions: 254595
Number of successful extensions: 1423
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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