Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26f01
         (626 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C5P4 Cluster: SJCHGC04769 protein; n=1; Schistosoma j...    33   7.4  
UniRef50_O26102 Cluster: Pyridoxine 5'-phosphate synthase; n=4; ...    33   7.4  
UniRef50_Q4QGH0 Cluster: Putative uncharacterized protein; n=3; ...    32   9.8  

>UniRef50_Q5C5P4 Cluster: SJCHGC04769 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04769 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 231

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 148 IVCNHCVCDVACLCYWTSPNVK 213
           I C+HC+C + CLCY TS N +
Sbjct: 50  IQCSHCLCWLHCLCYNTSFNTE 71


>UniRef50_O26102 Cluster: Pyridoxine 5'-phosphate synthase; n=4;
           Helicobacter|Rep: Pyridoxine 5'-phosphate synthase -
           Helicobacter pylori (Campylobacter pylori)
          Length = 262

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +3

Query: 225 IYLSAHIRPLFDIGLHHARFSNSRIVEFHTKPYNLCFKKIHVNNNERVRTP*LNRSEVPL 404
           I +S  I PL D  LH AR    + VEFHT  Y      ++ N N ++    + + + P 
Sbjct: 126 IEVSLFIDPLKD-ALHFAREHQVKQVEFHTGVYANLHNALYSNANNQIHAISVLKDKSPK 184

Query: 405 KMKQD 419
           ++K++
Sbjct: 185 ELKEE 189


>UniRef50_Q4QGH0 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1607

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 483 LYK*LIRLPPGYFDT-TFDYVENLVSFSKVPPTYSVTVYAHVHYYL 349
           LY+ L RLP  +FDT +FD VE +V +  V     V V  HVH+Y+
Sbjct: 750 LYEALTRLPLAFFDTHSFDEVEQIVYY--VNDIEGVEV--HVHHYI 791


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,492,401
Number of Sequences: 1657284
Number of extensions: 11400546
Number of successful extensions: 22007
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21980
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)