Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26f01
         (626 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC072409-1|AAH72409.1|  833|Homo sapiens SMEK1 protein protein.        31   4.4  
BC038932-1|AAH38932.1|  594|Homo sapiens SMEK1 protein protein.        31   4.4  
AK024297-1|BAB14877.1|  696|Homo sapiens protein ( Homo sapiens ...    31   4.4  
AB095930-1|BAC23106.1|  920|Homo sapiens KIAA2010 protein protein.     31   4.4  

>BC072409-1|AAH72409.1|  833|Homo sapiens SMEK1 protein protein.
          Length = 833

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 368 HTFIIIYMDFFKT*VIGFCMEFYNSAIRKSRVVKPYVK 255
           H F+ +    FK  +IG   EFYN  I KS + +P VK
Sbjct: 548 HAFLALCALRFKRKIIGLKDEFYNRYIMKSFLFEPVVK 585


>BC038932-1|AAH38932.1|  594|Homo sapiens SMEK1 protein protein.
          Length = 594

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 368 HTFIIIYMDFFKT*VIGFCMEFYNSAIRKSRVVKPYVK 255
           H F+ +    FK  +IG   EFYN  I KS + +P VK
Sbjct: 309 HAFLALCALRFKRKIIGLKDEFYNRYIMKSFLFEPVVK 346


>AK024297-1|BAB14877.1|  696|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14235 fis, clone NT2RP4000167. ).
          Length = 696

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 368 HTFIIIYMDFFKT*VIGFCMEFYNSAIRKSRVVKPYVK 255
           H F+ +    FK  +IG   EFYN  I KS + +P VK
Sbjct: 411 HAFLALCALRFKRKIIGLKDEFYNRYIMKSFLFEPVVK 448


>AB095930-1|BAC23106.1|  920|Homo sapiens KIAA2010 protein protein.
          Length = 920

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 368 HTFIIIYMDFFKT*VIGFCMEFYNSAIRKSRVVKPYVK 255
           H F+ +    FK  +IG   EFYN  I KS + +P VK
Sbjct: 635 HAFLALCALRFKRKIIGLKDEFYNRYIMKSFLFEPVVK 672


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,218,313
Number of Sequences: 237096
Number of extensions: 1703257
Number of successful extensions: 2382
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2381
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)