Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26e22
         (588 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               24   0.96 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   2.9  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   9.0  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 129 DNALLCAR*QTANLC*LQNVMADETRKMEMSRG 31
           D+  LC + +  NL  + +++ DE+ +M   RG
Sbjct: 22  DDITLCLKQENLNLDDIDSLLEDESERMLRKRG 54


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 256 AFDSIGEWVECVEILDGHTIER 191
           A  SI E+    E+L  HT+E+
Sbjct: 259 AMSSIAEFSVSTEVLQDHTLEK 280


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 200 RMSIQNLNTFDPFADAIKSSE 262
           RM  +N+N FDP+       E
Sbjct: 225 RMVDENINGFDPYVKTPNDEE 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,123
Number of Sequences: 438
Number of extensions: 3515
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)