Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26e16
(392 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-... 168 4e-41
UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core, ... 159 1e-38
UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm... 156 1e-37
UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2; ... 74 4e-28
UniRef50_UPI0000E49E77 Cluster: PREDICTED: hypothetical protein;... 93 2e-18
UniRef50_A5K5F8 Cluster: U6 snRNA-associated Sm-like protein LSm... 91 5e-18
UniRef50_Q014C2 Cluster: Small Nuclear ribonucleoprotein splicin... 91 7e-18
UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm... 90 1e-17
UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm... 85 6e-16
UniRef50_A4VDT4 Cluster: Putative uncharacterized protein; n=1; ... 85 6e-16
UniRef50_Q6CFJ1 Cluster: Similar to sp|O95777 Homo sapiens U6 sn... 85 6e-16
UniRef50_Q0UHH8 Cluster: Predicted protein; n=2; Pezizomycotina|... 79 4e-14
UniRef50_A6RWH0 Cluster: Predicted protein; n=10; Pezizomycotina... 73 2e-12
UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1; ... 66 2e-10
UniRef50_A7TII8 Cluster: Putative uncharacterized protein; n=1; ... 66 2e-10
UniRef50_A4RMU3 Cluster: Small nuclear ribonucleoprotein LSM8; n... 65 4e-10
UniRef50_Q4XN64 Cluster: U6 snRNA-associated sm-like protein, pu... 61 6e-09
UniRef50_P87173 Cluster: Uncharacterized protein C3D6.08c; n=1; ... 60 1e-08
UniRef50_Q5CLJ8 Cluster: U6 snRNA-associated sm-like protein; n=... 59 3e-08
UniRef50_Q4UC24 Cluster: U6 snRNA-associated Sm-like potein, put... 59 3e-08
UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus lu... 58 5e-08
UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1; ... 58 5e-08
UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza sat... 58 8e-08
UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole gen... 57 1e-07
UniRef50_Q6BIX4 Cluster: Similar to CA2640|IPF2930 Candida albic... 57 1e-07
UniRef50_Q5CQ90 Cluster: Small nuclear ribonucleoprotein U6; n=1... 54 7e-07
UniRef50_P47017 Cluster: Sm-like protein LSm1; n=11; Saccharomyc... 54 7e-07
UniRef50_Q20229 Cluster: Putative uncharacterized protein lsm-1;... 53 2e-06
UniRef50_A1DH91 Cluster: Small nuclear ribonucleoprotein (LSM1),... 53 2e-06
UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces cere... 53 2e-06
UniRef50_A0BR97 Cluster: Chromosome undetermined scaffold_122, w... 52 3e-06
UniRef50_Q8SRU9 Cluster: U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPRO... 52 3e-06
UniRef50_Q1HQ51 Cluster: LSM1-like protein; n=3; Endopterygota|R... 52 4e-06
UniRef50_O15116 Cluster: U6 snRNA-associated Sm-like protein LSm... 51 9e-06
UniRef50_Q5K8A9 Cluster: RNA cap binding protein, putative; n=1;... 50 2e-05
UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 49 3e-05
UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;... 49 4e-05
UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep: Zgc:... 48 5e-05
UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa g... 48 5e-05
UniRef50_A2F979 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 48 6e-05
UniRef50_UPI0000499A4F Cluster: small nuclear ribonucleoprotein ... 47 1e-04
UniRef50_P47093 Cluster: U6 snRNA-associated Sm-like protein LSm... 46 2e-04
UniRef50_Q8ILU8 Cluster: Ribonucleoprotein, putative; n=2; Plasm... 46 3e-04
UniRef50_Q7SDS5 Cluster: Putative uncharacterized protein NCU030... 45 5e-04
UniRef50_Q4YVP4 Cluster: Ribonucleoprotein, putative; n=3; Plasm... 45 6e-04
UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1... 45 6e-04
UniRef50_Q75CP4 Cluster: ACL125Cp; n=1; Eremothecium gossypii|Re... 44 0.001
UniRef50_Q5DGC2 Cluster: SJCHGC05770 protein; n=1; Schistosoma j... 44 0.001
UniRef50_A5K4Q4 Cluster: LSM domain containing protein; n=4; Pla... 44 0.001
UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole ge... 43 0.002
UniRef50_Q6QA14 Cluster: Lsm8p; n=6; Trypanosomatidae|Rep: Lsm8p... 43 0.002
UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein NCU019... 43 0.002
UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4; T... 43 0.002
UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is associ... 42 0.003
UniRef50_A2EG20 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 42 0.004
UniRef50_A0CCJ3 Cluster: Chromosome undetermined scaffold_167, w... 42 0.004
UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 42 0.004
UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.006
UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein ... 41 0.007
UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1; ... 41 0.007
UniRef50_A7ARL9 Cluster: LSM domain containing protein; n=1; Bab... 41 0.007
UniRef50_A4S454 Cluster: Predicted protein; n=1; Ostreococcus lu... 41 0.010
UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46... 41 0.010
UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotei... 41 0.010
UniRef50_Q8SQH7 Cluster: Probable U6 snRNA-associated Sm-like pr... 41 0.010
UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of s... 40 0.013
UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3; M... 40 0.013
UniRef50_A2BIG9 Cluster: LSM domain-containing protein 1; n=14; ... 40 0.013
UniRef50_Q7R6I4 Cluster: GLP_170_167704_168030; n=1; Giardia lam... 40 0.017
UniRef50_A2QP90 Cluster: Contig An07c0280, complete genome; n=3;... 40 0.017
UniRef50_A7D237 Cluster: Like-Sm ribonucleoprotein, core; n=1; H... 40 0.017
UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotei... 40 0.017
UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm... 40 0.017
UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm... 40 0.017
UniRef50_Q9LMB5 Cluster: F14D16.28; n=6; core eudicotyledons|Rep... 40 0.023
UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative; ... 40 0.023
UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putati... 40 0.023
UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus ory... 40 0.023
UniRef50_P40018 Cluster: Small nuclear ribonucleoprotein-associa... 40 0.023
UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein, pu... 39 0.030
UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1; ... 39 0.030
UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm... 39 0.030
UniRef50_UPI00004984BB Cluster: small nuclear ribonucleoprotein;... 39 0.039
UniRef50_Q2C2H2 Cluster: Ferrichrome-binding protein; n=1; Photo... 39 0.039
UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein, ... 39 0.039
UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep: A... 39 0.039
UniRef50_Q59KX5 Cluster: Potential spliceosomal snRNA Sm core bi... 39 0.039
UniRef50_Q10163 Cluster: Uncharacterized protein C26A3.08; n=38;... 39 0.039
UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1; Ae... 39 0.039
UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotei... 39 0.039
UniRef50_P63162 Cluster: Small nuclear ribonucleoprotein-associa... 39 0.039
UniRef50_Q4D159 Cluster: Small nuclear ribonucleoprotein protein... 38 0.052
UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, wh... 38 0.052
UniRef50_A3DP35 Cluster: Like-Sm ribonucleoprotein, core; n=1; S... 38 0.052
UniRef50_Q4TAB6 Cluster: Chromosome undetermined SCAF7390, whole... 38 0.069
UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th... 38 0.069
UniRef50_Q5CME6 Cluster: Similar to small nuclear ribonucleoprot... 38 0.091
UniRef50_A7ANM8 Cluster: Sm domain containing protein; n=1; Babe... 38 0.091
UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein, pu... 38 0.091
UniRef50_Q1DNR5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.091
UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 38 0.091
UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 smal... 37 0.12
UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep... 37 0.12
UniRef50_A1RY58 Cluster: Like-Sm ribonucleoprotein, core; n=1; T... 37 0.12
UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;... 37 0.12
UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putati... 37 0.16
UniRef50_Q7SG45 Cluster: Predicted protein; n=1; Neurospora cras... 37 0.16
UniRef50_Q2UPT0 Cluster: Predicted protein; n=2; Aspergillus|Rep... 37 0.16
UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein polypep... 36 0.21
UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotei... 36 0.21
UniRef50_A5E144 Cluster: Putative uncharacterized protein; n=1; ... 36 0.21
UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1; S... 36 0.21
UniRef50_Q4N780 Cluster: Putative uncharacterized protein; n=2; ... 36 0.28
UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G, puta... 36 0.28
UniRef50_Q9HPS2 Cluster: SnRNP homolog; n=2; Halobacteriaceae|Re... 36 0.28
UniRef50_Q976F2 Cluster: 90aa long hypothetical small nuclear ri... 36 0.28
UniRef50_UPI00015561AA Cluster: PREDICTED: similar to Small nucl... 36 0.37
UniRef50_Q98RT8 Cluster: Small nucleolar ribonucleoprotein G; n=... 36 0.37
UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putati... 36 0.37
UniRef50_Q16ZD8 Cluster: Small nuclear ribonucleoprotein, core, ... 36 0.37
UniRef50_Q9BRA0 Cluster: LSM domain-containing protein 1; n=12; ... 36 0.37
UniRef50_A6RDN8 Cluster: Putative uncharacterized protein; n=1; ... 35 0.48
UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm... 35 0.48
UniRef50_Q99700 Cluster: Ataxin-2; n=50; Euteleostomi|Rep: Ataxi... 35 0.48
UniRef50_UPI000023F18E Cluster: hypothetical protein FG00901.1; ... 35 0.64
UniRef50_Q7R4T3 Cluster: GLP_440_43387_42998; n=1; Giardia lambl... 35 0.64
UniRef50_Q55A45 Cluster: Putative small nuclear ribonucleopartic... 35 0.64
UniRef50_Q755T6 Cluster: AER432Cp; n=1; Eremothecium gossypii|Re... 35 0.64
UniRef50_Q6CMZ8 Cluster: Similar to sp|P47093 Saccharomyces cere... 35 0.64
UniRef50_A7T7F0 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 34 0.85
UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2; ... 34 0.85
UniRef50_A2EH12 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 34 0.85
UniRef50_Q1DW82 Cluster: Putative uncharacterized protein; n=1; ... 34 0.85
UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51... 34 0.85
UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm... 34 0.85
UniRef50_UPI00015BACE3 Cluster: Like-Sm ribonucleoprotein, core;... 34 1.1
UniRef50_A7EV69 Cluster: Putative uncharacterized protein; n=1; ... 34 1.1
UniRef50_A3LXX4 Cluster: Predicted protein; n=3; Saccharomycetac... 34 1.1
UniRef50_Q20YQ3 Cluster: Short-chain dehydrogenase/reductase SDR... 33 1.5
UniRef50_A5P2Y6 Cluster: Putative uncharacterized protein; n=4; ... 33 1.5
UniRef50_Q4V6D7 Cluster: IP05148p; n=2; Drosophila melanogaster|... 33 1.5
UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6; Trypanoso... 33 1.5
UniRef50_Q8SS46 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN F; n=1;... 33 1.5
UniRef50_O42978 Cluster: U6 snRNP-associated protein Lsm5; n=4; ... 33 1.5
UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1; ... 33 1.5
UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 33 1.5
UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10; A... 33 1.5
UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces cere... 33 2.0
UniRef50_A6R2S6 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 2.0
UniRef50_UPI0000DB6CA6 Cluster: PREDICTED: similar to neuroblast... 33 2.6
UniRef50_Q0AVS0 Cluster: CheW protein; n=1; Syntrophomonas wolfe... 33 2.6
UniRef50_Q9FI15 Cluster: Similarity to small nuclear ribonucleop... 33 2.6
UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142, w... 33 2.6
UniRef50_A2BK21 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_Q1VR11 Cluster: Putative uncharacterized protein; n=1; ... 32 3.4
UniRef50_Q1MRA4 Cluster: ABC transporter ATP-binding protein; n=... 32 3.4
UniRef50_Q92337 Cluster: ATP-binding cassette transporter abc1; ... 32 3.4
UniRef50_A5WGB4 Cluster: Extradiol ring-cleavage dioxygenase, cl... 32 4.5
UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E hom... 32 4.5
UniRef50_Q6CWY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 32 4.5
UniRef50_Q2HFG8 Cluster: Putative uncharacterized protein; n=1; ... 32 4.5
UniRef50_Q483J5 Cluster: Major facilitator family transporter; n... 31 6.0
UniRef50_Q26HT4 Cluster: TonB-dependent outer membrane receptor;... 31 6.0
UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E, puta... 31 6.0
UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albica... 31 6.0
UniRef50_Q0UBA8 Cluster: Predicted protein; n=1; Phaeosphaeria n... 31 6.0
UniRef50_A6R7U2 Cluster: Predicted protein; n=2; Eurotiomycetida... 31 6.0
UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1; ... 31 6.0
UniRef50_Q00ZJ3 Cluster: Chromosome 10 contig 1, DNA sequence; n... 31 7.9
UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2; ... 31 7.9
UniRef50_Q7ZUG0 Cluster: Small nuclear ribonucleoprotein E; n=18... 31 7.9
UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm... 31 7.9
>UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-PA
- Drosophila melanogaster (Fruit fly)
Length = 95
Score = 168 bits (408), Expect = 4e-41
Identities = 74/94 (78%), Positives = 88/94 (93%)
Frame = +3
Query: 72 SGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHII 251
SGLE+Y+N TVS+IT+DGRNFIGTLKGFDQTINII+DE HERVFS+TSG+ Q+VLGLHII
Sbjct: 2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHII 61
Query: 252 RGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
RGDN+A++G IDE+IDSRLDL NI+ EPLGP+VH
Sbjct: 62 RGDNIAVIGLIDETIDSRLDLANIRGEPLGPVVH 95
>UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core,
putative; n=2; Culicidae|Rep: Small nuclear
ribonucleoprotein, core, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 162
Score = 159 bits (387), Expect = 1e-38
Identities = 73/101 (72%), Positives = 86/101 (85%)
Frame = +3
Query: 51 YKIIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQV 230
Y I SGLE+YVN TVS+IT+DGRNF+GTLKGFDQTINIILDESHERV+S +G+ QV
Sbjct: 62 YDIHETMSGLESYVNTTVSIITADGRNFVGTLKGFDQTINIILDESHERVYSMNAGIEQV 121
Query: 231 VLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
VLGLHIIRGDNVA++GQ+DESIDS+LD I+ PL P+VH
Sbjct: 122 VLGLHIIRGDNVAVIGQLDESIDSKLDFSTIRGLPLEPVVH 162
>UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=23; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm8 - Homo sapiens (Human)
Length = 96
Score = 156 bits (379), Expect = 1e-37
Identities = 71/96 (73%), Positives = 84/96 (87%)
Frame = +3
Query: 66 MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLH 245
M S LENY+N+TV+VITSDGR +GTLKGFDQTIN+ILDESHERVFSS+ GV QVVLGL+
Sbjct: 1 MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 246 IIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
I+RGDNVA++G+IDE DS LDLGNI+AEPL + H
Sbjct: 61 IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96
>UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 73.7 bits (173), Expect(2) = 4e-28
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = +3
Query: 75 GLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSS 209
GLE+ V+Q +SVIT+DGRN +GTL+GFDQ NIILDESHERV+S+
Sbjct: 7 GLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYST 51
Score = 72.5 bits (170), Expect(2) = 4e-28
Identities = 29/53 (54%), Positives = 43/53 (81%)
Frame = +3
Query: 195 RVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
+V GV Q+VLGL+IIRGDN+++VG++DE +D+RLDL N++A PL P++H
Sbjct: 89 KVSCQHEGVQQLVLGLYIIRGDNISVVGEVDEELDARLDLSNLRAHPLKPVIH 141
>UniRef50_UPI0000E49E77 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 105
Score = 93.1 bits (221), Expect = 2e-18
Identities = 44/73 (60%), Positives = 59/73 (80%)
Frame = +3
Query: 135 IGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDL 314
+GTLKGFDQTIN+ILDESHERV+S+T+ V QVVL +IR A++G++D+ +D+ LDL
Sbjct: 37 LGTLKGFDQTINLILDESHERVYSNTAEVEQVVLLFSLIR----AVIGEVDDDVDTGLDL 92
Query: 315 GNIKAEPLGPMVH 353
NI+AEPL +VH
Sbjct: 93 PNIRAEPLNAVVH 105
>UniRef50_A5K5F8 Cluster: U6 snRNA-associated Sm-like protein LSm8,
putative; n=2; Plasmodium|Rep: U6 snRNA-associated
Sm-like protein LSm8, putative - Plasmodium vivax
Length = 95
Score = 91.5 bits (217), Expect = 5e-18
Identities = 43/92 (46%), Positives = 62/92 (67%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
+E+Y+ + VIT+D R F G LKGFDQT NIIL +ER++ + + ++ LGL+IIRG
Sbjct: 6 IESYLENEILVITNDSRIFTGKLKGFDQTTNIILGNCYERIYKES--LEKISLGLYIIRG 63
Query: 258 DNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
D V ++G+IDE +D + IK E L P+VH
Sbjct: 64 DTVTLIGEIDEDVDKNILHHKIKPETLKPIVH 95
>UniRef50_Q014C2 Cluster: Small Nuclear ribonucleoprotein splicing
factor; n=1; Ostreococcus tauri|Rep: Small Nuclear
ribonucleoprotein splicing factor - Ostreococcus tauri
Length = 110
Score = 91.1 bits (216), Expect = 7e-18
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 11/97 (11%)
Frame = +3
Query: 90 VNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVA 269
V+ V V+T+DGR+ +GTL+GFDQ N+IL++ ERV+SS SGV + LG+++IRGDNV
Sbjct: 12 VHARVHVLTNDGRHVVGTLRGFDQVTNVILEDCAERVYSSESGVEEAPLGVYMIRGDNVC 71
Query: 270 I-----------VGQIDESIDSRLDLGNIKAEPLGPM 347
+ VG +DE +D++LDL +A PL P+
Sbjct: 72 VGDDAIDATRPLVGPVDEELDAKLDLSGTRALPLKPI 108
>UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=1; Schizosaccharomyces pombe|Rep: U6 snRNA-associated
Sm-like protein LSm8 - Schizosaccharomyces pombe
(Fission yeast)
Length = 94
Score = 90.2 bits (214), Expect = 1e-17
Identities = 39/92 (42%), Positives = 64/92 (69%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L +++ Q V VIT+DGR +G+LKGFD T N+IL +S ER+ S + + LG++++RG
Sbjct: 3 LADFMEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFERIISMDQDMETIPLGVYLLRG 62
Query: 258 DNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
+NVA+VG ++E +DS ++ I+ E + +VH
Sbjct: 63 ENVAMVGLVNEELDSEIEWTKIRGEAIPDVVH 94
>UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm8,
putative; n=2; Piroplasmida|Rep: U6 snRNA-associated
Sm-like protein LSm8, putative - Theileria parva
Length = 94
Score = 84.6 bits (200), Expect = 6e-16
Identities = 38/96 (39%), Positives = 64/96 (66%)
Frame = +3
Query: 66 MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLH 245
MA LE ++ +V VI+ DGR F+G LKGFDQ N++L ERV+ + V ++ LG++
Sbjct: 1 MAPILEQFIECSVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIY 60
Query: 246 IIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
++RGDN+ +VG++D +D + I+A P+ P+++
Sbjct: 61 LLRGDNIVLVGEVDVDVDR--SMSGIEALPINPVIY 94
>UniRef50_A4VDT4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 107
Score = 84.6 bits (200), Expect = 6e-16
Identities = 38/101 (37%), Positives = 69/101 (68%)
Frame = +3
Query: 51 YKIIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQV 230
Y+ I++ + LE + + + +IT+DG+ IG LKG DQ +N IL + ERVFSS + +
Sbjct: 8 YQPIKLLNPLEKLLFKKIQIITTDGKVLIGILKGLDQALNSILSDCVERVFSSENNTKTI 67
Query: 231 VLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
GL+++RGDN+A++G++DE I+++++ + K + L P+ +
Sbjct: 68 KHGLYLLRGDNIAVLGEVDEEIENQINYDS-KIQCLKPITN 107
>UniRef50_Q6CFJ1 Cluster: Similar to sp|O95777 Homo sapiens U6
snRNA-associated Sm-like protein LSm8; n=1; Yarrowia
lipolytica|Rep: Similar to sp|O95777 Homo sapiens U6
snRNA-associated Sm-like protein LSm8 - Yarrowia
lipolytica (Candida lipolytica)
Length = 97
Score = 84.6 bits (200), Expect = 6e-16
Identities = 38/90 (42%), Positives = 57/90 (63%)
Frame = +3
Query: 72 SGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHII 251
S L Y+N+ V+VIT+DGR +G L+G+DQ N+IL + ERV + V LGL+++
Sbjct: 2 SALSGYINKPVTVITTDGRLILGILQGYDQATNVILSNTRERVITPDEPTEVVDLGLYML 61
Query: 252 RGDNVAIVGQIDESIDSRLDLGNIKAEPLG 341
RGD +A VG+ D +D + G ++ E LG
Sbjct: 62 RGDCIACVGETDLELDGSIQWGEVRGEELG 91
>UniRef50_Q0UHH8 Cluster: Predicted protein; n=2;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 98
Score = 78.6 bits (185), Expect = 4e-14
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVA---QVVLGLHI 248
L Y+N+ V+V+T DGR IGTL D ++N++L E+ ER+ +V LGL+I
Sbjct: 3 LNAYLNKRVTVLTLDGRTMIGTLFSCDGSMNLVLQEAVERIIRPREEEVPSEEVPLGLYI 62
Query: 249 IRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
+RGD+VA+VG++DE +D +D + E LG H
Sbjct: 63 VRGDSVAVVGRLDEELDKTIDWTKVHGEVLGSTRH 97
>UniRef50_A6RWH0 Cluster: Predicted protein; n=10;
Pezizomycotina|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 98
Score = 72.9 bits (171), Expect = 2e-12
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV---AQVVLGLHI 248
L +YVN+ V ++T+D R +GTL DQ N++L ++ ER+ + ++V GL++
Sbjct: 3 LSSYVNKKVLILTADSRTLVGTLLSCDQQTNLVLSQTIERIIRPPEDIEASSEVPHGLYL 62
Query: 249 IRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
IRGDNV +VG +DE +D ++ ++ +G H
Sbjct: 63 IRGDNVVVVGLVDEELDDSINWVEVRGAVIGGTKH 97
>UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 129
Score = 66.1 bits (154), Expect = 2e-10
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = +3
Query: 66 MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLH 245
M+SGL + V++ + V+ DGR FIG ++ FDQ NI+L ++ ER++ + LGL
Sbjct: 1 MSSGLGDEVDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIYVGDC-YSDKNLGLF 59
Query: 246 IIRGDNVAIVGQID 287
IRGDNV I+G+ID
Sbjct: 60 FIRGDNVVILGEID 73
>UniRef50_A7TII8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 109
Score = 66.1 bits (154), Expect = 2e-10
Identities = 35/91 (38%), Positives = 55/91 (60%)
Frame = +3
Query: 66 MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLH 245
M+ L++Y+N+ + +IT++GR + TL+GFD+ N++L + H+R F S SGV Q V
Sbjct: 1 MSPLLKDYLNKKIVIITTEGRCLLATLEGFDKNTNLVLSQVHDR-FGS-SGVVQAV---Q 55
Query: 246 IIRGDNVAIVGQIDESIDSRLDLGNIKAEPL 338
++RG V G +D+ D DL N PL
Sbjct: 56 LLRGSEVVSCGLLDDGYDEADDLSNESVTPL 86
>UniRef50_A4RMU3 Cluster: Small nuclear ribonucleoprotein LSM8; n=1;
Magnaporthe grisea|Rep: Small nuclear ribonucleoprotein
LSM8 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 101
Score = 65.3 bits (152), Expect = 4e-10
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSG----VAQVVLGLH 245
L +YV++ V ++T+DGR IGTL D NIIL ER + G V + +G
Sbjct: 5 LNSYVDKRVVIMTTDGRMLIGTLINSDNQANIILYNVTERHIAPADGDEDSVDRPSVGTE 64
Query: 246 IIRGDNVAIVGQIDESIDSRLDLGNIKAEPLG 341
IIRG + +VG +DE ++ +D ++ EP+G
Sbjct: 65 IIRGSTILVVGLVDEELEGSIDWTKVRGEPIG 96
>UniRef50_Q4XN64 Cluster: U6 snRNA-associated sm-like protein,
putative; n=1; Plasmodium chabaudi|Rep: U6
snRNA-associated sm-like protein, putative - Plasmodium
chabaudi
Length = 65
Score = 61.3 bits (142), Expect = 6e-09
Identities = 28/65 (43%), Positives = 44/65 (67%)
Frame = +3
Query: 156 DQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEP 335
DQT NIIL +ER++ + + ++ LG++IIRGDNV ++G+IDE +D + IK E
Sbjct: 1 DQTTNIILGNCYERIYKES--LEKISLGIYIIRGDNVTLIGEIDEEVDRNILQNKIKPEM 58
Query: 336 LGPMV 350
L P++
Sbjct: 59 LKPVM 63
>UniRef50_P87173 Cluster: Uncharacterized protein C3D6.08c; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C3D6.08c - Schizosaccharomyces pombe (Fission yeast)
Length = 140
Score = 60.5 bits (140), Expect = 1e-08
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHI 248
+ L +YV++ V V+ DG+ IG L+ FDQ N++L + ER++ + G++I
Sbjct: 13 SGSLVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDM-YGDIDRGVYI 71
Query: 249 IRGDNVAIVGQ--IDESIDSRLDLGNIKAEPLGPM 347
+RG+NV ++G+ +D+ D+ L + AE L P+
Sbjct: 72 VRGENVVLLGELDLDKEYDAVKQLRRMPAEELYPL 106
>UniRef50_Q5CLJ8 Cluster: U6 snRNA-associated sm-like protein; n=2;
Cryptosporidium|Rep: U6 snRNA-associated sm-like protein
- Cryptosporidium hominis
Length = 98
Score = 59.3 bits (137), Expect = 3e-08
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFS-STSGVAQVVLGLH 245
+S LE ++N+TVSV+T D + ++G L GFDQ NI+L E++++ + V V +
Sbjct: 3 SSTLEQFINKTVSVLTVDNKVYVGNLVGFDQLTNIVLQNCSEKIYNKDLNKVETVSMESL 62
Query: 246 IIRGDNVAIVGQ 281
++RGD + +VG+
Sbjct: 63 VLRGDCIGMVGE 74
>UniRef50_Q4UC24 Cluster: U6 snRNA-associated Sm-like potein,
putative; n=1; Theileria annulata|Rep: U6
snRNA-associated Sm-like potein, putative - Theileria
annulata
Length = 113
Score = 58.8 bits (136), Expect = 3e-08
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +3
Query: 99 TVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNV 266
+V VI+ DGR F+G LKGFDQ N++L ERV+ + V ++ LG++++RGDN+
Sbjct: 19 SVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLLRGDNM 74
>UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 126
Score = 58.4 bits (135), Expect = 5e-08
Identities = 30/78 (38%), Positives = 50/78 (64%)
Frame = +3
Query: 66 MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLH 245
+AS +EN +++ + V DG N IGTL+ FDQ NI+L+ + ER+ + + LGL+
Sbjct: 10 VASLVEN-LDKRLLVALRDGSNIIGTLRSFDQFANIVLESAVERIIVGKM-FSDIPLGLY 67
Query: 246 IIRGDNVAIVGQIDESID 299
I+RG+NV ++G + + D
Sbjct: 68 IVRGENVVLMGDVGANGD 85
>UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 148
Score = 58.4 bits (135), Expect = 5e-08
Identities = 30/92 (32%), Positives = 55/92 (59%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHI 248
+ L + V++ + V+ DG+ IG L+ +DQ N++L ++ ERVF + V G+ +
Sbjct: 15 SGSLVDCVDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVG-NRYGDVARGIFL 73
Query: 249 IRGDNVAIVGQIDESIDSRLDLGNIKAEPLGP 344
+RG+NV ++G+ID +D+ ++ A PL P
Sbjct: 74 VRGENVVLMGEID--LDAEDEVPPSIAAPLPP 103
>UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza
sativa|Rep: OSIGBa0140O07.9 protein - Oryza sativa
(Rice)
Length = 136
Score = 57.6 bits (133), Expect = 8e-08
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = +3
Query: 60 IRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLG 239
I +++ L ++++ + V+ DGR +GTL FDQ N++L + ERV V LG
Sbjct: 10 IFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL-YCDVPLG 68
Query: 240 LHIIRGDNVAIVGQI 284
L++IRG+NV ++G++
Sbjct: 69 LYVIRGENVVLIGEL 83
>UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 242
Score = 57.2 bits (132), Expect = 1e-07
Identities = 25/73 (34%), Positives = 46/73 (63%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHI 248
++ L +Y+++ + V+ DGR +G L+ FDQ N +L+ + ER + LGL++
Sbjct: 12 STSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDI-YCDIPLGLYV 70
Query: 249 IRGDNVAIVGQID 287
IRG+NV ++G++D
Sbjct: 71 IRGENVVLLGELD 83
Score = 51.6 bits (118), Expect = 5e-06
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +3
Query: 108 VITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQID 287
V+ DGR +G L+ FDQ N +L+ + ER + LGL++IRG+NV ++G++D
Sbjct: 139 VLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDI-YCDIPLGLYVIRGENVVLLGELD 197
>UniRef50_Q6BIX4 Cluster: Similar to CA2640|IPF2930 Candida albicans
IPF2930 Suppressor of PAB1; n=3; Saccharomycetaceae|Rep:
Similar to CA2640|IPF2930 Candida albicans IPF2930
Suppressor of PAB1 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 91
Score = 56.8 bits (131), Expect = 1e-07
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = +3
Query: 120 DGRNFIGTLKGFDQTINIILDESHERVF--SSTSGVAQVVLGLHIIRGDNVAIVGQIDES 293
+ R F GTL+GFD + N+I++ ER+ ++ LGL+++RG N+ +G++D++
Sbjct: 10 NARLFEGTLQGFDNSTNVIINNCIERLIYPDEQDDNQEIPLGLYLMRGGNIVCIGEVDDT 69
Query: 294 IDSRLDLGNIKAEPL 338
I++ +D +K E L
Sbjct: 70 IEADIDWMKVKGETL 84
>UniRef50_Q5CQ90 Cluster: Small nuclear ribonucleoprotein U6; n=1;
Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein U6 - Cryptosporidium parvum Iowa II
Length = 160
Score = 54.4 bits (125), Expect = 7e-07
Identities = 28/75 (37%), Positives = 44/75 (58%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
LE +++ + V+ DGR F G + FDQ ++ L+ S E VFS+ ++ G I RG
Sbjct: 46 LEEDLDKEIYVVLRDGRQFTGIFRSFDQYGSLCLERSFE-VFSNNDCYNEIYQGCMIFRG 104
Query: 258 DNVAIVGQIDESIDS 302
DN+ + G ID++I S
Sbjct: 105 DNLMLCGLIDQNIKS 119
>UniRef50_P47017 Cluster: Sm-like protein LSm1; n=11;
Saccharomycetales|Rep: Sm-like protein LSm1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 172
Score = 54.4 bits (125), Expect = 7e-07
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +3
Query: 90 VNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERV-FSSTSGVAQVVLGLHIIRGDNV 266
V++ + V+ DGR G L+ FDQ N+IL + ER+ FS + A+ G+ +IRG+NV
Sbjct: 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 109
Query: 267 AIVGQID 287
++G++D
Sbjct: 110 VMLGEVD 116
>UniRef50_Q20229 Cluster: Putative uncharacterized protein lsm-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein lsm-1 - Caenorhabditis elegans
Length = 125
Score = 53.2 bits (122), Expect = 2e-06
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHI 248
A L +++ + V+ DGR IG L+ DQ N+IL++ ER F + G +
Sbjct: 11 AISLFEQLDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVE-KYFCETGQGFML 69
Query: 249 IRGDNVAIVGQIDESIDSRL 308
IRG+NV + G+ID++I++ L
Sbjct: 70 IRGENVELAGEIDDTIETGL 89
>UniRef50_A1DH91 Cluster: Small nuclear ribonucleoprotein (LSM1),
putative; n=11; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein (LSM1), putative - Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 177
Score = 53.2 bits (122), Expect = 2e-06
Identities = 23/73 (31%), Positives = 47/73 (64%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHI 248
A+ L + ++ + ++ DGR IG L+ +DQ N++L ++ ER+++ A + G+ +
Sbjct: 50 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNL-YADIPRGIFL 108
Query: 249 IRGDNVAIVGQID 287
+RG+NV ++G+ID
Sbjct: 109 VRGENVLLLGEID 121
>UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like - Yarrowia lipolytica
(Candida lipolytica)
Length = 144
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV-AQVVLGLH 245
A+ L +++ V V GR F G L+ FDQ N++L +++E+ F+ V + G +
Sbjct: 17 AAALLPVIDRKVVVTLRGGRKFFGILRSFDQFANLVLQDTYEKYFAVPEKVYGEEYRGTY 76
Query: 246 IIRGDNVAIVGQID 287
IIRG+NV ++G+++
Sbjct: 77 IIRGENVELMGEVN 90
>UniRef50_A0BR97 Cluster: Chromosome undetermined scaffold_122,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_122,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 66
Score = 52.4 bits (120), Expect = 3e-06
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +3
Query: 165 INIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGP 344
+N +L S ERV+S +GV + GL +IRGD VA++G+++ + +D +KA L P
Sbjct: 1 MNCVLQNSEERVYSLETGVQFLNAGLQVIRGDTVAVLGEVNLEKEKSIDFDKVKANQLPP 60
Query: 345 M 347
+
Sbjct: 61 I 61
>UniRef50_Q8SRU9 Cluster: U6 snRNA-ASSOCIATED SMALL
RIBONUCLEOPROTEIN; n=1; Encephalitozoon cuniculi|Rep: U6
snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN -
Encephalitozoon cuniculi
Length = 102
Score = 52.4 bits (120), Expect = 3e-06
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Frame = +3
Query: 81 ENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGD 260
E Y+ Q V V+ DGR G +K FDQ ++ LD ER+F T A+ L IIRG+
Sbjct: 13 EKYLEQEVVVMLRDGRYLYGVMKSFDQFNSVTLDGVIERIFHDTR-YAERRHELFIIRGE 71
Query: 261 NVAIVG----QIDESIDSRLDLGNIKAEPLG 341
N+ ++G ++E ++ + D +K E LG
Sbjct: 72 NITMIGLSPPDVEEGLE-QADFWALKNEILG 101
>UniRef50_Q1HQ51 Cluster: LSM1-like protein; n=3; Endopterygota|Rep:
LSM1-like protein - Bombyx mori (Silk moth)
Length = 138
Score = 52.0 bits (119), Expect = 4e-06
Identities = 24/83 (28%), Positives = 47/83 (56%)
Frame = +3
Query: 90 VNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVA 269
+++ + V+ DGR IG L+ DQ N++L ++ ER+ + G+ I+RG+NV
Sbjct: 18 LDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGKE-YGDIPRGIFIVRGENVV 76
Query: 270 IVGQIDESIDSRLDLGNIKAEPL 338
++G+ID+ + L L + + +
Sbjct: 77 LLGEIDKDKEENLPLTEVSVDEI 99
>UniRef50_O15116 Cluster: U6 snRNA-associated Sm-like protein LSm1;
n=23; Eumetazoa|Rep: U6 snRNA-associated Sm-like protein
LSm1 - Homo sapiens (Human)
Length = 133
Score = 50.8 bits (116), Expect = 9e-06
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +3
Query: 108 VITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQID 287
V+ DGR IG L+ DQ N++L ++ ER+ + G+ ++RG+NV ++G+ID
Sbjct: 20 VLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKK-YGDIPRGIFVVRGENVVLLGEID 78
Query: 288 ESIDSRLDLGNIKAEPL 338
+S L + E +
Sbjct: 79 LEKESDTPLQQVSIEEI 95
>UniRef50_Q5K8A9 Cluster: RNA cap binding protein, putative; n=1;
Filobasidiella neoformans|Rep: RNA cap binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 135
Score = 50.0 bits (114), Expect = 2e-05
Identities = 26/90 (28%), Positives = 47/90 (52%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHI 248
+ L + V++ V VI DGR IG + +DQ N +L+ ER+ A +G+ +
Sbjct: 10 SGSLVDLVDKKVLVILRDGRKLIGLFRSYDQFANFLLESCVERLHYKLE-YADKDIGVLL 68
Query: 249 IRGDNVAIVGQIDESIDSRLDLGNIKAEPL 338
+RG+NV +G+ID + + L + + +
Sbjct: 69 VRGENVVALGEIDLIAEDMVPLQQVNVQEI 98
>UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 100
Score = 49.2 bits (112), Expect = 3e-05
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV----AQVVLGLH 245
L ++++ V V S GR GTLKG+DQ +N++LDE+ E + + + LGL
Sbjct: 10 LARFIDRGVRVKLSGGREVTGTLKGYDQLLNLVLDEAIEHLRDAEDALKISDETRALGLL 69
Query: 246 IIRGDNVAIVGQID 287
+ RG +V +V +D
Sbjct: 70 VCRGTSVMVVSALD 83
>UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;
Eukaryota|Rep: U6 snRNP-associated protein Lsm7 -
Schizosaccharomyces pombe (Fission yeast)
Length = 113
Score = 48.8 bits (111), Expect = 4e-05
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV---AQVVLGLHI 248
L Y +Q + + GR G LKGFDQ +N++LD+ E++ + G A LGL +
Sbjct: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87
Query: 249 IRGDNVAIVGQIDES 293
+RG + ++ +D S
Sbjct: 88 VRGTTLVLIAPMDGS 102
>UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep:
Zgc:101136 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 133
Score = 48.4 bits (110), Expect = 5e-05
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 108 VITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQID 287
V+ DGR IG L+ DQ N++L ++ ER+ + G+ ++RG+NV ++G++D
Sbjct: 20 VLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKK-FGDIPRGIFVVRGENVVLLGEVD 78
>UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa
group|Rep: Predicted protein - Ajellomyces capsulatus
NAm1
Length = 171
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L Y+ + V V + GR GTLKG+DQ +N++LD+ E + LGL + RG
Sbjct: 87 LTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVARG 146
Query: 258 DNVAIVGQIDES 293
+ ++ +D S
Sbjct: 147 TLLVLISPVDGS 158
>UniRef50_A2F979 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 126
Score = 48.0 bits (109), Expect = 6e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 102 VSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQ 281
V VIT+D ++G L FDQ NIIL ++ R F + LG IR D V ++G+
Sbjct: 48 VCVITADDIEYVGELSSFDQFGNIILAKAVLRTFGPNGYDDEEKLGTIFIRSDQVILIGK 107
Query: 282 IDESIDSRL 308
+D+ +++L
Sbjct: 108 VDKDKENKL 116
>UniRef50_UPI0000499A4F Cluster: small nuclear ribonucleoprotein F;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein F - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 47.2 bits (107), Expect = 1e-04
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHER---VFSSTSGVAQV--V 233
+S + Y+N T+ V T +GRNF+G FD+ +N+IL E+ E+ + T ++
Sbjct: 5 SSKISKYINYTIKVTTIEGRNFVGKFLAFDKYMNMILSETIEKRTVINKKTREEKEIERS 64
Query: 234 LGLHIIRGD 260
LG+ ++RGD
Sbjct: 65 LGMMLLRGD 73
>UniRef50_P47093 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=2; Saccharomyces cerevisiae|Rep: U6 snRNA-associated
Sm-like protein LSm8 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 109
Score = 46.4 bits (105), Expect = 2e-04
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +3
Query: 66 MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLH 245
M++ L++Y+N+ V +I DG I +L GFD+ N+ + VF+ S + +
Sbjct: 1 MSATLKDYLNKRVVIIKVDGECLIASLNGFDKNTNLFI----TNVFNRIS--KEFICKAQ 54
Query: 246 IIRGDNVAIVGQIDESIDSRL 308
++RG +A+VG ID D L
Sbjct: 55 LLRGSEIALVGLIDAENDDSL 75
>UniRef50_Q8ILU8 Cluster: Ribonucleoprotein, putative; n=2;
Plasmodium|Rep: Ribonucleoprotein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 201
Score = 45.6 bits (103), Expect = 3e-04
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Frame = +3
Query: 72 SGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE--RVFSSTSGVAQV--VLG 239
S LE ++ V V SD R F+GT +D+ +NI+L ++ E +V S + + ++ V+G
Sbjct: 5 SRLETWLQYRVRVTISDTRYFVGTFLSYDRHMNIVLVDAEEFRKVKSQENSLKEIKRVVG 64
Query: 240 LHIIRGDNV 266
L +IRG+N+
Sbjct: 65 LILIRGENI 73
>UniRef50_Q7SDS5 Cluster: Putative uncharacterized protein
NCU03085.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU03085.1 - Neurospora crassa
Length = 108
Score = 45.2 bits (102), Expect = 5e-04
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 222 AQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 353
A++ LG H+IRGD V +VG +DE +D +D +K +G H
Sbjct: 65 AEIELGTHMIRGDTVCLVGLVDEPLDESIDWTKVKGATIGTTKH 108
>UniRef50_Q4YVP4 Cluster: Ribonucleoprotein, putative; n=3;
Plasmodium (Vinckeia)|Rep: Ribonucleoprotein, putative -
Plasmodium berghei
Length = 194
Score = 44.8 bits (101), Expect = 6e-04
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE--RVFSSTSGVAQV--VLGLH 245
LE+++ V V SD R ++GT +D+ +NI+L ++ E RV + + ++ V+GL
Sbjct: 7 LESWLQYRVRVTISDTRYYVGTFLSYDRHMNIVLVDAEEFRRVKNKENNFKEIKRVVGLI 66
Query: 246 IIRGDNV 266
+IRGDN+
Sbjct: 67 LIRGDNI 73
>UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: U6 snRNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 131
Score = 44.8 bits (101), Expect = 6e-04
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L +V++++ V GR G LKG+DQ +N+++D+ E G LGL ++RG
Sbjct: 29 LAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEY---EDGRPTRSLGLVVLRG 85
Query: 258 DNVAIVGQIDES 293
N+ +V D S
Sbjct: 86 PNIVLVSPTDGS 97
>UniRef50_Q75CP4 Cluster: ACL125Cp; n=1; Eremothecium gossypii|Rep:
ACL125Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 106
Score = 44.0 bits (99), Expect = 0.001
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +3
Query: 66 MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLH 245
M+ L+ Y+ + V V+T+DG + TL+GFD+T N++L + +R A ++ G
Sbjct: 1 MSPLLKEYLGRRVVVVTTDGGCLVATLEGFDKTANLLLSDVRQRATGEGLAAAFLLQGSQ 60
Query: 246 II 251
I+
Sbjct: 61 IV 62
>UniRef50_Q5DGC2 Cluster: SJCHGC05770 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05770 protein - Schistosoma
japonicum (Blood fluke)
Length = 139
Score = 43.6 bits (98), Expect = 0.001
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHI 248
A+ L + + + V GR FIG L+ DQ N++L + ER+ V G+ +
Sbjct: 11 AASLIQDIGKKMVVSLRGGRMFIGFLRIIDQFGNVVLHNAVERIHVENK-FCDVPQGILL 69
Query: 249 IRGDNVAIVGQI--DESIDSRLD 311
IRG+N+ I+G + + +ID +L+
Sbjct: 70 IRGENIIIIGDLNPEVNIDEKLE 92
>UniRef50_A5K4Q4 Cluster: LSM domain containing protein; n=4;
Plasmodium|Rep: LSM domain containing protein -
Plasmodium vivax
Length = 256
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 72 SGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVF-SSTSGVAQVVLGLHI 248
S E ++ + + + D + ++G L+ +DQ NI L E++ + + V +G I
Sbjct: 118 STFEEDIDTYIFISSRDNKLYLGILRTYDQHGNIFLTHCVEKIIVPDRNCFSDVYVGNLI 177
Query: 249 IRGDNVAIVGQIDE 290
IRGDN+A G +DE
Sbjct: 178 IRGDNIAYFGSVDE 191
>UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole
genome shotgun sequence; n=8; Eukaryota|Rep: Chromosome
chr13 scaffold_210, whole genome shotgun sequence -
Vitis vinifera (Grape)
Length = 113
Score = 43.2 bits (97), Expect = 0.002
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 15 LFDVDYY*FEFIYKIIRMASGLE--NYVNQTVSVITSDGRNFIGTLKGFDQTINIILDES 188
L D + +E +++ R + L+ +V++ V V + GR GTLKG+DQ +N++LDE+
Sbjct: 2 LIQYDMWCYETLFQSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 61
Query: 189 HERVFSSTSGVAQV----VLGLHIIRGDNVAIVGQID 287
E + LGL + RG V +V D
Sbjct: 62 VEFLRDPDDPQKTTDQTRRLGLIVCRGTAVMLVSPTD 98
>UniRef50_Q6QA14 Cluster: Lsm8p; n=6; Trypanosomatidae|Rep: Lsm8p -
Trypanosoma brucei
Length = 129
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVF 203
L Y+ + VSV+T DGR +G L DQ +N++L ERVF
Sbjct: 2 LSQYLRRRVSVVTVDGRYLVGVLHAADQLMNLVLTSCAERVF 43
>UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein
NCU01930.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU01930.1 - Neurospora crassa
Length = 132
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L+ Y++Q ++V + GR GTLKG+D +N++LD+ V + V GL + RG
Sbjct: 58 LKKYMDQRITVKFNGGREVTGTLKGYDALMNLVLDD-----------VQEAVRGLVVARG 106
Query: 258 DNVAIVGQIDES 293
+ ++ +D S
Sbjct: 107 TLLVVISPVDGS 118
>UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4;
Thermoplasmatales|Rep: Small nuclear ribonucleoprotein -
Thermoplasma volcanium
Length = 71
Score = 42.7 bits (96), Expect = 0.002
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
LE VN+ VS++ D R GTL G+D +N++LD+ E ++ V++ LG +IRG
Sbjct: 8 LEESVNKRVSLLLKDNRVLEGTLTGYDDYMNMVLDDVDE----NSENVSR-KLGTVVIRG 62
Query: 258 DNV 266
NV
Sbjct: 63 SNV 65
>UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins; n=1;
Aspergillus niger|Rep: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins -
Aspergillus niger
Length = 105
Score = 42.3 bits (95), Expect = 0.003
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 81 ENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGD 260
+ Y+ + V + R IG L+G+D +NI+LDE+ F G +V +G+ +IRG+
Sbjct: 20 QQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEA----FEEKQGGEKVAIGMIVIRGN 75
Query: 261 NVAIV 275
+V ++
Sbjct: 76 SVVML 80
>UniRef50_A2EG20 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 158
Score = 41.9 bits (94), Expect = 0.004
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = +3
Query: 72 SGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILD--ESHERVFSSTSGVAQVV---L 236
S L ++N V V+ SD R F+G + FD NI+L E + R+ +G Q +
Sbjct: 7 SKLSKFINSRVKVVISDHRYFVGQMLAFDTHSNIVLKDCEEYRRLNRRKAGELQEAKRNI 66
Query: 237 GLHIIRGDNV 266
GL I+RG+ V
Sbjct: 67 GLMILRGETV 76
>UniRef50_A0CCJ3 Cluster: Chromosome undetermined scaffold_167,
whole genome shotgun sequence; n=3;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_167, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 138
Score = 41.9 bits (94), Expect = 0.004
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +3
Query: 87 YVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQV----VLGLHIIR 254
+++ V + DGR +GT FD+ +N+IL E E G+ ++ LG+ I+R
Sbjct: 10 WIDYRVRITLGDGRMLVGTFLAFDKHLNVILSECEEYRIRK-QGIHEIETKRTLGMIIVR 68
Query: 255 GDNV 266
GDN+
Sbjct: 69 GDNI 72
>UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Like-Sm
ribonucleoprotein, core - Candidatus Nitrosopumilus
maritimus SCM1
Length = 78
Score = 41.9 bits (94), Expect = 0.004
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L+ +NQ V + + G L GFDQ +N++LD S E G A+ LG ++RG
Sbjct: 10 LDESINQIVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEE---IPAEGEAK-GLGSIVVRG 65
Query: 258 DNVAIV 275
DNV ++
Sbjct: 66 DNVVMI 71
>UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 234
Score = 41.5 bits (93), Expect = 0.006
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVF--------SSTSGVAQVV 233
L + V++ V V+ D + +IG L+ +DQ N++L E HER+ SS V + +
Sbjct: 97 LLDMVDKKVDVLLRDEKEYIGILRSYDQFANLVLTECHERIAARNPDAEPSSAPSVPRWL 156
Query: 234 L------GLHIIRGDNVAIVGQID 287
+ G+ IRG+NV I +D
Sbjct: 157 IHDVKLPGVMTIRGENVTICATVD 180
>UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein G;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein G - Entamoeba histolytica HM-1:IMSS
Length = 81
Score = 41.1 bits (92), Expect = 0.007
Identities = 20/70 (28%), Positives = 42/70 (60%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L++Y+ + + V R+ IG L G+D+ +N++LDE+++ S+ + +G+ +I G
Sbjct: 8 LKHYLEKRILVKIHGKRSIIGVLSGYDEYMNLVLDEAYDA--SNPDTDKHIPIGMIMILG 65
Query: 258 DNVAIVGQID 287
+++ V ID
Sbjct: 66 NSILSVETID 75
>UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 73
Score = 41.1 bits (92), Expect = 0.007
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 75 GLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVF 203
GL + N+ + V GR IG L+GFD N++LDE+ E +F
Sbjct: 23 GLNKFNNKEIKVKLCGGREVIGILRGFDAVTNLVLDETVEYMF 65
>UniRef50_A7ARL9 Cluster: LSM domain containing protein; n=1;
Babesia bovis|Rep: LSM domain containing protein -
Babesia bovis
Length = 167
Score = 41.1 bits (92), Expect = 0.007
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV-AQVVLGLHIIR 254
LE+ + + V D +++G K FDQ NI L +S +V GV + V G IIR
Sbjct: 22 LEDELGSLIWVTLRDETSYVGIFKSFDQYGNIFLTDSVRKVIVQAEGVFSDVYNGNLIIR 81
Query: 255 GDNVAIVGQID 287
G+++A +D
Sbjct: 82 GESIAYFCSLD 92
>UniRef50_A4S454 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 105
Score = 40.7 bits (91), Expect = 0.010
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 81 ENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
ENY+ T+ T DGR F+GTL+ D+ NI++ ++ E
Sbjct: 16 ENYIGATIRTTTRDGRCFVGTLRCVDKQRNIVVSDARE 53
>UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46;
Eukaryota|Rep: Small nuclear ribonucleoprotein G - Homo
sapiens (Human)
Length = 76
Score = 40.7 bits (91), Expect = 0.010
Identities = 21/70 (30%), Positives = 46/70 (65%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L+ ++++ +S+ + GR+ G L+GFD +N+++DE E +TSG Q +G+ +IRG
Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE---MATSG-QQNNIGMVVIRG 64
Query: 258 DNVAIVGQID 287
+++ ++ ++
Sbjct: 65 NSIIMLEALE 74
>UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotein
G; n=14; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein G - Drosophila melanogaster (Fruit
fly)
Length = 76
Score = 40.7 bits (91), Expect = 0.010
Identities = 19/70 (27%), Positives = 42/70 (60%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
++ Y+++ + + + GR G L+GFD +N++LD++ E +T +G+ +IRG
Sbjct: 9 VKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKN----NIGMVVIRG 64
Query: 258 DNVAIVGQID 287
+++ +V +D
Sbjct: 65 NSIVMVEALD 74
>UniRef50_Q8SQH7 Cluster: Probable U6 snRNA-associated Sm-like
protein; n=1; Encephalitozoon cuniculi|Rep: Probable U6
snRNA-associated Sm-like protein - Encephalitozoon
cuniculi
Length = 70
Score = 40.7 bits (91), Expect = 0.010
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L+ Y+ + V V T G + GTL+GFD+ IN++L SS G VL +RG
Sbjct: 8 LKMYLKERVEVKTKSGEAYTGTLEGFDEHINLML------TCSSVEGSEDKVL---FLRG 58
Query: 258 DNVAIVG 278
+N+ VG
Sbjct: 59 ENILFVG 65
>UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 40.3 bits (90), Expect = 0.013
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERV 200
L NY ++ + V GR IG LKGFDQ +N++L++ E +
Sbjct: 35 LNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENI 75
>UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3;
Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 80
Score = 40.3 bits (90), Expect = 0.013
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 78 LENYVN-QTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIR 254
L+ +N Q V + GR G L+G+D +N++LD++ E V G AQ + G IIR
Sbjct: 14 LDQVLNRQPVLISLKGGREIKGVLQGYDVHMNLVLDKAEEIV----QGQAQSI-GTLIIR 68
Query: 255 GDNVAIV 275
GDNV +
Sbjct: 69 GDNVIYI 75
>UniRef50_A2BIG9 Cluster: LSM domain-containing protein 1; n=14;
Euteleostomi|Rep: LSM domain-containing protein 1 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 109
Score = 40.3 bits (90), Expect = 0.013
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +3
Query: 42 EFIYKIIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV 221
E Y + R LEN +N+++ + +DGR +G D+ N+IL + E ST +
Sbjct: 18 ELAYSLARCK--LENLLNKSMRIRMTDGRTLVGLFLCTDRDCNVILGSAQE-FLKSTDSL 74
Query: 222 AQ---VVLGLHIIRGDNVAIVGQIDESIDS 302
+Q VLGL +I G +V + ES+ +
Sbjct: 75 SQGEPRVLGLAMIPGHHVVSIEVETESLQT 104
>UniRef50_Q7R6I4 Cluster: GLP_170_167704_168030; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_170_167704_168030 - Giardia
lamblia ATCC 50803
Length = 108
Score = 39.9 bits (89), Expect = 0.017
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 72 SGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV--AQVVLGLH 245
+G + V + V V+T+ G + GTL +D N++L ++ +R+ T+GV A V +G
Sbjct: 13 AGFRHAVGRPVLVVTAAGPQYFGTLTHYDGFGNVLLKDTAQRI---TNGVLYADVPMGWV 69
Query: 246 IIRGDNV 266
++RGD++
Sbjct: 70 LVRGDDM 76
>UniRef50_A2QP90 Cluster: Contig An07c0280, complete genome; n=3;
Trichocomaceae|Rep: Contig An07c0280, complete genome -
Aspergillus niger
Length = 275
Score = 39.9 bits (89), Expect = 0.017
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLH 245
L++ + +T+ V +D R F+GT K D NIIL ++E F S S V G H
Sbjct: 10 LDSLIGRTLRVHATDTRIFVGTFKCTDAARNIILASTYEYRFPSPSTVRDAATGTH 65
>UniRef50_A7D237 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Like-Sm
ribonucleoprotein, core - Halorubrum lacusprofundi ATCC
49239
Length = 80
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILD---ESHERVFSSTSG-VAQVVLGLH 245
LE + + V+V DG + G L G+DQ +NI+++ + +RV G A +
Sbjct: 9 LEASLEEPVTVHLKDGTTYYGILAGYDQHMNIVIEPETDVDDRVDDDLDGEFAVAIEDTT 68
Query: 246 IIRGDNVAIV 275
IIRGDNV +
Sbjct: 69 IIRGDNVVTI 78
>UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotein
G; n=16; Bilateria|Rep: Probable small nuclear
ribonucleoprotein G - Caenorhabditis elegans
Length = 77
Score = 39.9 bits (89), Expect = 0.017
Identities = 21/66 (31%), Positives = 40/66 (60%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L+ Y+++ + + + R G L+GFD +N+++DE+ E + G V LG+ +IRG
Sbjct: 9 LKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVE--YQKDGG--SVNLGMTVIRG 64
Query: 258 DNVAIV 275
++V I+
Sbjct: 65 NSVVIM 70
>UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=26; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm7 - Homo sapiens (Human)
Length = 103
Score = 39.9 bits (89), Expect = 0.017
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERV------FSSTSGVAQVVLG 239
L Y+++T+ V GR G LKGFD +N++LD + E + + T Q LG
Sbjct: 15 LSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQ--LG 72
Query: 240 LHIIRGDNVAIV 275
L + RG +V ++
Sbjct: 73 LVVCRGTSVVLI 84
>UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=5; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm5 - Saccharomyces cerevisiae (Baker's yeast)
Length = 93
Score = 39.9 bits (89), Expect = 0.017
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVF----SSTSGVAQVVLGLH 245
++ +NQ V ++ R F GTL GFD +N+IL+++ E + S + G
Sbjct: 12 IDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVMQHHGRM 71
Query: 246 IIRGDNVAIV 275
++ G+N+AI+
Sbjct: 72 LLSGNNIAIL 81
>UniRef50_Q9LMB5 Cluster: F14D16.28; n=6; core eudicotyledons|Rep:
F14D16.28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 39.5 bits (88), Expect = 0.023
Identities = 17/40 (42%), Positives = 28/40 (70%)
Frame = +3
Query: 168 NIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQID 287
N +L+E++ERV + LGL+IIRG+NV ++G++D
Sbjct: 131 NAVLEEAYERVIVGDL-YCDIPLGLYIIRGENVVLIGELD 169
>UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative;
n=2; Theileria|Rep: U6 snRNA-associated protein,
putative - Theileria parva
Length = 104
Score = 39.5 bits (88), Expect = 0.023
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +3
Query: 51 YKIIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV--- 221
++ ++ L ++N+ V V S GR G L+G D N++LD++ E + S+
Sbjct: 8 FRDVKSVINLNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEYLKDSSDSSKLT 67
Query: 222 -AQVVLGLHIIRGDNVAIVGQID--ESIDS 302
+ LGL + RG +V +V ++ E ID+
Sbjct: 68 GEKRNLGLLVARGTSVTVVYPVEGTEKIDN 97
>UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putative;
n=1; Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein, putative - Cryptosporidium parvum
Iowa II
Length = 92
Score = 39.5 bits (88), Expect = 0.023
Identities = 18/62 (29%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 96 QTVSVITSDGRNFI--GTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVA 269
Q V + D +N + G ++GFD+ +NI+LD++ E V++ + +G ++RG+N++
Sbjct: 28 QRVQIWLYDHKNLVLEGVIQGFDEYMNIVLDQASE-VYTKKEVRRETSVGQLLLRGENIS 86
Query: 270 IV 275
++
Sbjct: 87 LI 88
>UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 122
Score = 39.5 bits (88), Expect = 0.023
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +3
Query: 126 RNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIV 275
R IG L+G+D +NI+LDE+ F G +V +G+ +IRG++V ++
Sbjct: 13 RKVIGILRGYDVFMNIVLDEA----FEEKQGGEKVAIGMVVIRGNSVVML 58
>UniRef50_P40018 Cluster: Small nuclear ribonucleoprotein-associated
protein B; n=4; Saccharomycetales|Rep: Small nuclear
ribonucleoprotein-associated protein B - Saccharomyces
cerevisiae (Baker's yeast)
Length = 196
Score = 39.5 bits (88), Expect = 0.023
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDES-HERV 200
+S L N ++ + V+T DGR +IG L FD+ +N++L+E ERV
Sbjct: 9 SSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERV 53
>UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein,
putative; n=4; Plasmodium|Rep: U6 snRNA-associated
Sm-like protein, putative - Plasmodium berghei
Length = 108
Score = 39.1 bits (87), Expect = 0.030
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +3
Query: 42 EFIYKIIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV 221
E I K + + ++ ++NQ + V GR +G L G D N++LD++ E +
Sbjct: 9 ENINKDNKFMNDIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEFIRDPNDSY 68
Query: 222 AQVV----LGLHIIRGDNVAIVGQID 287
+GL + RG +VA++ ++
Sbjct: 69 VITEKSRNIGLIVARGTSVALITPVN 94
>UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 134
Score = 39.1 bits (87), Expect = 0.030
Identities = 15/41 (36%), Positives = 29/41 (70%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERV 200
L+ ++++ ++V GR GTL+GFD +N+++DE+ E+V
Sbjct: 56 LKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDEAIEQV 96
>UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm;
n=1; Aeropyrum pernix|Rep: Putative small nucleolar RNP
protein Sm - Aeropyrum pernix
Length = 94
Score = 39.1 bits (87), Expect = 0.030
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L+ ++N + V DG ++G L D T+N+ILD++ E + T VA++ G +I+G
Sbjct: 16 LKEHLNSQIYVKLKDGSEYVGKLVATDTTMNLILDDAIEVADNGTRLVAKI--GRVLIKG 73
Query: 258 DNVAIV 275
V +
Sbjct: 74 SMVEFI 79
>UniRef50_UPI00004984BB Cluster: small nuclear ribonucleoprotein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein - Entamoeba histolytica HM-1:IMSS
Length = 89
Score = 38.7 bits (86), Expect = 0.039
Identities = 17/50 (34%), Positives = 35/50 (70%)
Frame = +3
Query: 138 GTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQID 287
GTL GFDQ IN++L ++ E V+ T+ + +G +++G+N++++ +I+
Sbjct: 41 GTLSGFDQYINLVLTDT-EEVYLKTN--TRRKIGTILLKGENISVISKIE 87
>UniRef50_Q2C2H2 Cluster: Ferrichrome-binding protein; n=1;
Photobacterium sp. SKA34|Rep: Ferrichrome-binding
protein - Photobacterium sp. SKA34
Length = 294
Score = 38.7 bits (86), Expect = 0.039
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 54 KIIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINII--LDESHERVFSSTSGVAQ 227
++++ +N VN+T V T +G+ G GF++ I I+ LDESH RV S +
Sbjct: 142 RVLKKEKEAQNLVNKTEKVFTKNGKRLKGI--GFNKEILIVRFLDESHLRVHGENSLLGN 199
Query: 228 VVLGLHI 248
V+ +H+
Sbjct: 200 VLKEMHL 206
>UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein,
putative; n=3; Piroplasmida|Rep: (U6) snRNA-associated
Sm-like protein, putative - Theileria annulata
Length = 90
Score = 38.7 bits (86), Expect = 0.039
Identities = 18/66 (27%), Positives = 38/66 (57%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
++ + + +I + + GTL+GFD +N++L++ + FS+ GV L ++ G
Sbjct: 16 IDKCLGSKIWIIMKNDKEITGTLRGFDDYMNMVLEDVVDYSFSA-DGVKTTELNDALVNG 74
Query: 258 DNVAIV 275
+NVA++
Sbjct: 75 NNVAML 80
>UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep:
AGR130Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 80
Score = 38.7 bits (86), Expect = 0.039
Identities = 16/66 (24%), Positives = 37/66 (56%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
++ +NQ + V+ + R F GTL GFD +N+++++ E + + + G ++ G
Sbjct: 9 IDRAINQPIWVLLTSNREFTGTLVGFDDFVNVVIEDVVE--YDAPDRAVKRHPGRMLLSG 66
Query: 258 DNVAIV 275
+N+ ++
Sbjct: 67 NNITVL 72
>UniRef50_Q59KX5 Cluster: Potential spliceosomal snRNA Sm core
binding protein B/B'; n=1; Candida albicans|Rep:
Potential spliceosomal snRNA Sm core binding protein
B/B' - Candida albicans (Yeast)
Length = 110
Score = 38.7 bits (86), Expect = 0.039
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDE---------SHERVFSSTSGVAQV 230
+ + +N + +IT D R ++GTL FD+ +N++L + S+ ++ T V V
Sbjct: 1 MSDLINFRIKIITIDNRTYLGTLLSFDKHMNLVLSDTEESRITKKSYSQLKKHTPNVELV 60
Query: 231 V----LGLHIIRGDNVAIVGQIDESIDSRLDLGNIKA 329
LGL I+RGD V + +I+S L ++K+
Sbjct: 61 YDKRNLGLIILRGDQV-----VSFTIESNAPLTDVKS 92
>UniRef50_Q10163 Cluster: Uncharacterized protein C26A3.08; n=38;
Fungi/Metazoa group|Rep: Uncharacterized protein
C26A3.08 - Schizosaccharomyces pombe (Fission yeast)
Length = 147
Score = 38.7 bits (86), Expect = 0.039
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Frame = +3
Query: 90 VNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE-------RVFSSTSGVAQVVLGLHI 248
+N +++V T DGR F+G L FD +N++L + E V S++ + +LGL I
Sbjct: 10 LNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQNVPSNSVYEEKRMLGLVI 69
Query: 249 IRGD---NVAIVG--QIDESIDSRLDLGNIKAEPLG 341
+RG+ ++++ G +D S+ L G A P G
Sbjct: 70 LRGEFIVSLSVQGPPPMDPSMRGSLLSGPGVARPAG 105
>UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1;
Aeropyrum pernix|Rep: Putative snRNP Sm-like protein -
Aeropyrum pernix
Length = 77
Score = 38.7 bits (86), Expect = 0.039
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +3
Query: 84 NYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDN 263
+YV+ V V G G LK +DQ +NIIL ++ E TS + + LGL ++RGD+
Sbjct: 15 DYVDTPVLVKLKSGLRIKGVLKTYDQHLNIILGDAEE--IGETS-IRR--LGLTLVRGDS 69
Query: 264 VAIV 275
V ++
Sbjct: 70 VVVI 73
>UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotein
G; n=7; Ascomycota|Rep: Probable small nuclear
ribonucleoprotein G - Schizosaccharomyces pombe (Fission
yeast)
Length = 77
Score = 38.7 bits (86), Expect = 0.039
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHI 248
A L+ Y+++ V V + R G L+G+D +NI+L++S E +V +G
Sbjct: 6 APDLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDG----EKVKIGSVA 61
Query: 249 IRGDNVAIVGQIDE 290
IRG++V ++ +D+
Sbjct: 62 IRGNSVIMIETLDK 75
>UniRef50_P63162 Cluster: Small nuclear ribonucleoprotein-associated
protein N; n=94; Eukaryota|Rep: Small nuclear
ribonucleoprotein-associated protein N - Homo sapiens
(Human)
Length = 240
Score = 38.7 bits (86), Expect = 0.039
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQV------ 230
+S + +++ + I DGR FIGT K FD+ +N+IL + E Q
Sbjct: 6 SSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKR 65
Query: 231 VLGLHIIRGDNV 266
VLGL ++RG+N+
Sbjct: 66 VLGLVLLRGENL 77
>UniRef50_Q4D159 Cluster: Small nuclear ribonucleoprotein protein,
putative; n=5; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein protein, putative - Trypanosoma cruzi
Length = 114
Score = 38.3 bits (85), Expect = 0.052
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Frame = +3
Query: 90 VNQTVSVITSDGRNFIGTLKGFDQTINIIL---DESHERVFS-STSGVA-QVVLGLHIIR 254
+N+T+ ++ DGR G L +D+ +N++L ES E +G++ Q LGL ++R
Sbjct: 10 INRTLRIVLIDGRELTGKLLVYDRHMNVVLGDATESREETKKMKEAGISPQRSLGLVLLR 69
Query: 255 GDNVAIVGQIDESIDSRLDLGNIKAEP 335
G +V V + S ++ G K +P
Sbjct: 70 GVHVISVNVLGASENNGDGEGKTKGQP 96
>UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 83
Score = 38.3 bits (85), Expect = 0.052
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L++++N+ V + GR GTL FD +N++LDE E +Q +LGL I RG
Sbjct: 12 LQSHINKEVVIQFQGGRQVKGTLLSFDNQLNLVLDEVREL-------PSQRILGLVICRG 64
Query: 258 ---DNVAIVGQID 287
++ AI G ++
Sbjct: 65 ALINSFAIDGMVE 77
>UniRef50_A3DP35 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Staphylothermus marinus F1|Rep: Like-Sm
ribonucleoprotein, core - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 91
Score = 38.3 bits (85), Expect = 0.052
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L++ VNQ V V DG +IGTL D T+N++L E G G +IRG
Sbjct: 15 LKSAVNQIVLVKIKDGHEYIGTLNMVDHTMNVVLSNCQE---YGDDGKPIARYGKVLIRG 71
Query: 258 DNVAIV 275
++ +
Sbjct: 72 SHIVFI 77
>UniRef50_Q4TAB6 Cluster: Chromosome undetermined SCAF7390, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7390,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 268
Score = 37.9 bits (84), Expect = 0.069
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE--RVFSSTSGVAQ----V 230
+S + +++ + I DGR FIGT K FD+ +N+IL + E ++ S +
Sbjct: 13 SSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPEREEKR 72
Query: 231 VLGLHIIRGDNV 266
VLGL ++RG+N+
Sbjct: 73 VLGLVLLRGENL 84
>UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4;
Thermoplasmatales|Rep: Putative snRNP Sm-like protein -
Thermoplasma acidophilum
Length = 83
Score = 37.9 bits (84), Expect = 0.069
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L++ +++ V + R + G L+G+D +NI+L + E + GV VL +RG
Sbjct: 14 LKSALSRNVLIDVKGNREYSGILEGYDVYMNIVLQNASEIINGENKGVYDRVL----VRG 69
Query: 258 DNVAIV 275
DNV V
Sbjct: 70 DNVIFV 75
>UniRef50_Q5CME6 Cluster: Similar to small nuclear
ribonucleoprotein; n=2; Cryptosporidium|Rep: Similar to
small nuclear ribonucleoprotein - Cryptosporidium
hominis
Length = 139
Score = 37.5 bits (83), Expect = 0.091
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE--RVFSSTS-GVAQVVLGLHI 248
++ Y+N + V D R +G L FD+ +N++L + E RV + LGL +
Sbjct: 1 MQKYINYRIRVTVQDDRVMVGNLMAFDRHMNLVLSDCQEYRRVKKGEEPKELKRSLGLIM 60
Query: 249 IRGDNV 266
+RG+N+
Sbjct: 61 LRGENI 66
>UniRef50_A7ANM8 Cluster: Sm domain containing protein; n=1; Babesia
bovis|Rep: Sm domain containing protein - Babesia bovis
Length = 159
Score = 37.5 bits (83), Expect = 0.091
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE-RVFSSTSGVAQVV-----LG 239
++ ++ V V DGR F+GT FD+ +N++L + E R+ Q V LG
Sbjct: 8 MQQWLQYRVRVAIKDGRKFVGTFIAFDKHMNLVLADCEEFRITKGKGPDKQKVELKRTLG 67
Query: 240 LHIIRGDNV 266
++RG+N+
Sbjct: 68 FIMLRGENI 76
>UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein,
putative (Small nuclear ribonucleoprotein (LSM7),
putative); n=2; Pezizomycotina|Rep: U6 snrna-associated
sm-like protein, putative (Small nuclear
ribonucleoprotein (LSM7), putative) - Aspergillus
fumigatus (Sartorya fumigata)
Length = 134
Score = 37.5 bits (83), Expect = 0.091
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
L Y+++ V V + GR G LKG+DQ +N++LD+ E
Sbjct: 55 LSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKE 93
>UniRef50_Q1DNR5 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 101
Score = 37.5 bits (83), Expect = 0.091
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 72 SGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVV 233
S LE+ +N+TV + TSD R F+G K D NIIL ++E F + + + +
Sbjct: 8 SYLESLLNRTVRLHTSDTRLFVGLFKCTDNDRNIILSNTYEYRFPTPVALNEAI 61
>UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Caldivirga maquilingensis IC-167|Rep: Like-Sm
ribonucleoprotein, core - Caldivirga maquilingensis
IC-167
Length = 86
Score = 37.5 bits (83), Expect = 0.091
Identities = 24/67 (35%), Positives = 36/67 (53%)
Frame = +3
Query: 90 VNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVA 269
VN++V V GR GTL+ DQ +NI+LD++ E + + V G +IRG+ V
Sbjct: 20 VNKSVVVKLKAGRVLSGTLRFIDQCMNIVLDDAEE--LDTRTNQVIVRYGKVLIRGNQVL 77
Query: 270 IVGQIDE 290
V +E
Sbjct: 78 YVSVRNE 84
>UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 small
nuclear RNA associated (S. cerevisiae); n=1; Macaca
mulatta|Rep: PREDICTED: LSM7 homolog, U6 small nuclear
RNA associated (S. cerevisiae) - Macaca mulatta
Length = 123
Score = 37.1 bits (82), Expect = 0.12
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
L Y+++T+ V GR G LKGFD +N++LD + E
Sbjct: 15 LSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIE 53
>UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep:
Sm-like protein - Sulfolobus acidocaldarius
Length = 87
Score = 37.1 bits (82), Expect = 0.12
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +3
Query: 54 KIIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVV 233
KI L+ +N+ V V +G ++G L+ D T+N++L + E ++ VA+
Sbjct: 4 KIENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDPVAK-- 61
Query: 234 LGLHIIRGDNVAIVGQIDESI 296
G +IRG N+ + ESI
Sbjct: 62 YGRVLIRGSNILFISIDYESI 82
>UniRef50_A1RY58 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Thermofilum pendens Hrk 5|Rep: Like-Sm
ribonucleoprotein, core - Thermofilum pendens (strain
Hrk 5)
Length = 100
Score = 37.1 bits (82), Expect = 0.12
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L N + V V DG ++G L+ D +N++LD++ E + + VAQ LG IRG
Sbjct: 7 LRNQSGKGVFVKLKDGSEYMGKLRMTDAAMNLVLDDAKE-LTETNKVVAQ--LGTVFIRG 63
Query: 258 DNVAIVGQIDESI 296
N+ V E +
Sbjct: 64 SNLLFVSLEPEKV 76
>UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;
Saccharomycetaceae|Rep: Small nuclear ribonucleoprotein
E - Saccharomyces cerevisiae (Baker's yeast)
Length = 94
Score = 37.1 bits (82), Expect = 0.12
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQV----VLGLH 245
L+ T+ + G G + GFD+ +N+++DE+ E +S G V LG
Sbjct: 21 LQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKI 80
Query: 246 IIRGDNVAIVGQID 287
+++GDN+ ++ D
Sbjct: 81 LLKGDNITLITSAD 94
>UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putative;
n=5; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein, putative - Leishmania major
Length = 81
Score = 36.7 bits (81), Expect = 0.16
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIIL-DESHERVFSSTSGVAQVVLGLHIIR 254
L +++ + + V GR+ G L+G D+ ++I+L D E ++ S A++ LG +IR
Sbjct: 10 LNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRNAAVSEEARLALGTTVIR 69
Query: 255 GDNVAIVGQID 287
G + + D
Sbjct: 70 GSAIVEIVSAD 80
>UniRef50_Q7SG45 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 178
Score = 36.7 bits (81), Expect = 0.16
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVV 233
L + +N+ + V +DGR F G K D NIIL ++E F ++S VA V
Sbjct: 21 LNSLLNKNLRVSVTDGRMFWGQFKCVDAESNIILHSAYEYRFPTSSQVAAAV 72
>UniRef50_Q2UPT0 Cluster: Predicted protein; n=2; Aspergillus|Rep:
Predicted protein - Aspergillus oryzae
Length = 118
Score = 36.7 bits (81), Expect = 0.16
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV 221
LE+ + QT+ V +D R F+G K D NIIL ++E F S S V
Sbjct: 10 LESLIGQTLRVHATDTRIFVGAFKCTDSARNIILASTYEYRFPSPSTV 57
>UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein
polypeptide G; n=1; Hyacinthus orientalis|Rep: Small
nuclear ribonucleoprotein polypeptide G - Hyacinthus
orientalis (Common hyacinth)
Length = 96
Score = 36.3 bits (80), Expect = 0.21
Identities = 17/54 (31%), Positives = 35/54 (64%)
Frame = +3
Query: 126 RNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQID 287
R +GTL+GFDQ +N+++D + E +G + +G+ +IRG++V ++ ++
Sbjct: 42 RVVVGTLRGFDQFMNLVIDNTME-----VNGNDKNDIGMVVIRGNSVVMIEALE 90
>UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Ostreococcus tauri|Rep: Putative small nuclear
ribonucleoprotein E - Ostreococcus tauri
Length = 101
Score = 36.3 bits (80), Expect = 0.21
Identities = 16/60 (26%), Positives = 38/60 (63%)
Frame = +3
Query: 87 YVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNV 266
Y+++ + + + R+ G L+GFDQ +N++LD+S ++ + + +G+ ++RG++V
Sbjct: 30 YMDKKLRLRLNGNRSVTGILRGFDQFLNLVLDDS-----TNDTTTEKTPMGMVVVRGNSV 84
>UniRef50_A5E144 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 152
Score = 36.3 bits (80), Expect = 0.21
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGV 221
+ + +N + ++T D R ++G+L FD+ +N++L ++ E + S +
Sbjct: 1 MSDLINYRLRILTVDNRTYVGSLLSFDKHLNLVLSDTEESRITKKSWI 48
>UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Staphylothermus marinus F1|Rep: Like-Sm
ribonucleoprotein, core - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 149
Score = 36.3 bits (80), Expect = 0.21
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 63 RMASGLENYVNQTVSVITSDGRNFIGTLKGFDQ-TINIILDES 188
R+A+ L V++ V VI +DGR + G L GFD ++NI+L+ +
Sbjct: 9 RLAAELAGLVDKKVKVILADGRFYEGILTGFDHPSLNILLENA 51
>UniRef50_Q4N780 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 162
Score = 35.9 bits (79), Expect = 0.28
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHER-VFSSTSGVAQVVLGLHIIR 254
LE+ + + V D ++G K FDQ NI++ ++ ++ + ++ + + G +IR
Sbjct: 17 LEDELGSLIWVTLRDDTFYVGLFKSFDQFGNIVITDAVKKIILNNKRSFSDIYCGYTVIR 76
Query: 255 GDNVAIVGQID 287
G++++ ID
Sbjct: 77 GESISYFCAID 87
>UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G,
putative; n=2; Piroplasmida|Rep: Small nuclear
ribonucleoprotein G, putative - Theileria parva
Length = 86
Score = 35.9 bits (79), Expect = 0.28
Identities = 18/47 (38%), Positives = 31/47 (65%)
Frame = +3
Query: 126 RNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNV 266
R+ +G L+G+D +NI+LD + E V G QV LG+ ++RG+++
Sbjct: 33 RHVVGVLRGYDTFMNIVLDNALEVV-----GEDQVDLGVVVVRGNSI 74
>UniRef50_Q9HPS2 Cluster: SnRNP homolog; n=2; Halobacteriaceae|Rep:
SnRNP homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 69
Score = 35.9 bits (79), Expect = 0.28
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILD 182
LE + +TV+V DG F G L G+DQ +N++++
Sbjct: 18 LEESLEETVTVRLKDGDEFTGVLTGYDQHMNVVIE 52
>UniRef50_Q976F2 Cluster: 90aa long hypothetical small nuclear
ribonucleoprotein; n=2; Thermoprotei|Rep: 90aa long
hypothetical small nuclear ribonucleoprotein -
Sulfolobus tokodaii
Length = 90
Score = 35.9 bits (79), Expect = 0.28
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +3
Query: 54 KIIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVV 233
KI L+ N+ V V DG ++G L+ D T+N++L + E + VA+
Sbjct: 9 KIENPLKSLKTATNKIVLVKLKDGSEYVGRLEQSDGTMNLVLRDCIETREGTAEPVAK-- 66
Query: 234 LGLHIIRGDNVAIV 275
G +IRG N+ +
Sbjct: 67 YGRVLIRGSNILFI 80
>UniRef50_UPI00015561AA Cluster: PREDICTED: similar to Small nuclear
ribonucleoprotein polypeptide N; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to Small nuclear
ribonucleoprotein polypeptide N - Ornithorhynchus
anatinus
Length = 154
Score = 35.5 bits (78), Expect = 0.37
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
+S + +++ + I DGR FIGT K FD+ +N+IL + E
Sbjct: 108 SSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 149
>UniRef50_Q98RT8 Cluster: Small nucleolar ribonucleoprotein G; n=1;
Guillardia theta|Rep: Small nucleolar ribonucleoprotein
G - Guillardia theta (Cryptomonas phi)
Length = 74
Score = 35.5 bits (78), Expect = 0.37
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
+ N++ + V+VI + N GTL GFD NI++ ++ +V + ++VL IRG
Sbjct: 10 ISNFIQKKVNVILINQINLKGTLVGFDNFSNIVIKKN--QVKQENCFINEIVL----IRG 63
Query: 258 DNVAIVGQIDES 293
D++ + +I+ES
Sbjct: 64 DSLVSI-EIEES 74
>UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putative;
n=8; Eukaryota|Rep: Small nuclear ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 83
Score = 35.5 bits (78), Expect = 0.37
Identities = 16/67 (23%), Positives = 37/67 (55%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHI 248
AS ++ + + + + R +G L+G+D +N++LD + E Q+ +G+ +
Sbjct: 11 ASDFRKFMEKRLQIYLNGNRQVVGILRGYDTFMNLVLDNTME-----IKKDEQIDIGVVV 65
Query: 249 IRGDNVA 269
IRG++++
Sbjct: 66 IRGNSIS 72
>UniRef50_Q16ZD8 Cluster: Small nuclear ribonucleoprotein, core,
putative; n=1; Aedes aegypti|Rep: Small nuclear
ribonucleoprotein, core, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 120
Score = 35.5 bits (78), Expect = 0.37
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
LE+++N T + +DGR IG D N+IL + E F+ G + VLGL +I G
Sbjct: 47 LESWLNNTFRIKMTDGRILIGMFVCTDADANVILGMTSE--FTENGG-EERVLGLVMIPG 103
Query: 258 DNVAIVGQIDES 293
+ + +IDE+
Sbjct: 104 RYIVSI-EIDEA 114
>UniRef50_Q9BRA0 Cluster: LSM domain-containing protein 1; n=12;
Theria|Rep: LSM domain-containing protein 1 - Homo
sapiens (Human)
Length = 125
Score = 35.5 bits (78), Expect = 0.37
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 63 RMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE--RVFSSTSGVAQVVL 236
R LE +N+T+ + +DGR +G D+ N+IL + E + S S VL
Sbjct: 40 RARQQLEALLNKTMRIRMTDGRTLVGCFLCTDRDCNVILGSAQEFLKPSDSFSAGEPRVL 99
Query: 237 GLHIIRGDNVAIVGQIDESI 296
GL ++ G ++ + ES+
Sbjct: 100 GLAMVPGHHIVSIEVQRESL 119
>UniRef50_A6RDN8 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 115
Score = 35.1 bits (77), Expect = 0.48
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFD-QTINIILDESHE 194
LE+ + +T+ + T+D R F+GT K D Q NIIL +HE
Sbjct: 10 LESLLGKTLRIHTTDARLFVGTFKCTDNQDRNIILSTTHE 49
>UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=6; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm7 - Saccharomyces cerevisiae (Baker's yeast)
Length = 115
Score = 35.1 bits (77), Expect = 0.48
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
L Y + + V G+ IG LKG+DQ +N++LD++ E
Sbjct: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVE 68
>UniRef50_Q99700 Cluster: Ataxin-2; n=50; Euteleostomi|Rep: Ataxin-2
- Homo sapiens (Human)
Length = 1312
Score = 35.1 bits (77), Expect = 0.48
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 39 FEFIYKIIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSG 218
F+ IY +RM L + V V +G + G K + +++LD +HE+ S+SG
Sbjct: 258 FDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSG 317
>UniRef50_UPI000023F18E Cluster: hypothetical protein FG00901.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00901.1 - Gibberella zeae PH-1
Length = 106
Score = 34.7 bits (76), Expect = 0.64
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
L +N+ + V TSDGR F G+LK D NI+L ++E
Sbjct: 10 LATILNKNLRVYTSDGRLFWGSLKCTDPDRNIVLSHTYE 48
>UniRef50_Q7R4T3 Cluster: GLP_440_43387_42998; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_440_43387_42998 - Giardia lamblia
ATCC 50803
Length = 129
Score = 34.7 bits (76), Expect = 0.64
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHI 248
A L NYV ++V +G + GTL D+ +N+++ RV S LGL +
Sbjct: 4 APKLVNYVGSPLTVHALNGYVYTGTLLAIDRHMNMVISSCCCRVKESARS-----LGLVV 58
Query: 249 IRGDNVAIVGQ 281
+RG+ VA Q
Sbjct: 59 LRGEEVAFFTQ 69
>UniRef50_Q55A45 Cluster: Putative small nuclear
ribonucleoparticle-associated protein; n=2;
Dictyostelium discoideum|Rep: Putative small nuclear
ribonucleoparticle-associated protein - Dictyostelium
discoideum AX4
Length = 274
Score = 34.7 bits (76), Expect = 0.64
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE----RVFSSTSGVAQVVL 236
+S + Y+N + V DGR +G FD+ +N+++ ++ E R + L
Sbjct: 7 SSKMLQYINYRMRVTIQDGRVIVGRFLAFDKHMNVVICDAEEFRRIRQKGKEDREEKRTL 66
Query: 237 GLHIIRGDNV 266
G+ +IRG+ V
Sbjct: 67 GMILIRGETV 76
>UniRef50_Q755T6 Cluster: AER432Cp; n=1; Eremothecium gossypii|Rep:
AER432Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 158
Score = 34.7 bits (76), Expect = 0.64
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 72 SGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFS 206
S L++ ++ + V++ DGR ++GTL FD +N++L + E S
Sbjct: 9 STLKDLIDYKLRVLSQDGRVYVGTLLAFDAHMNLVLADCVEERLS 53
>UniRef50_Q6CMZ8 Cluster: Similar to sp|P47093 Saccharomyces
cerevisiae YJR022w LSM8 splicing factor singleton; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P47093
Saccharomyces cerevisiae YJR022w LSM8 splicing factor
singleton - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 96
Score = 34.7 bits (76), Expect = 0.64
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +3
Query: 66 MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIIL 179
M++ L++Y+++ V ++ DG + G +KGFD N+IL
Sbjct: 1 MSALLKDYLDKKVMLVNVDGDTYYGEMKGFDHAGNMIL 38
>UniRef50_A7T7F0 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 86
Score = 34.3 bits (75), Expect = 0.85
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQV---VLGLHI 248
LE+++N+ + V SDGR IG+ D+ NIIL E + GV + +LGL +
Sbjct: 4 LESWLNKLMRVKISDGRTLIGSFLCTDKDRNIILGSCQEFSLLLSLGVDKEDPRILGLAM 63
Query: 249 IRGDNV 266
+ G ++
Sbjct: 64 VPGRHI 69
>UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 67
Score = 34.3 bits (75), Expect = 0.85
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +3
Query: 138 GTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDL 314
GTL FD+ +NI+L++ E + ++ G LG IR +NV + + +ES +++ ++
Sbjct: 5 GTLVSFDEYMNILLNDCEEWIDNTKKG----TLGKVFIRCNNVLYISRAEESKETKTEI 59
>UniRef50_A2EH12 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 98
Score = 34.3 bits (75), Expect = 0.85
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 78 LENYVNQTVSV-ITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIR 254
+E+ +N+ + + + + ++GTL FD+ +NI L E+ E V T G V+G IIR
Sbjct: 13 MESLLNKQIVIKLKWENIEYVGTLISFDERMNIHLSETSEYVGGKTEG----VMGDVIIR 68
Query: 255 GDNV 266
+N+
Sbjct: 69 CNNI 72
>UniRef50_Q1DW82 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 186
Score = 34.3 bits (75), Expect = 0.85
Identities = 14/40 (35%), Positives = 28/40 (70%)
Frame = +3
Query: 168 NIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQID 287
N++L ++ ERV+S + G++++RG+NV ++G+ID
Sbjct: 92 NLVLQDTVERVYSGNL-YGEEPRGVYLVRGENVLLLGEID 130
>UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Homo
sapiens (Human)
Length = 92
Score = 34.3 bits (75), Expect = 0.85
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = +3
Query: 138 GTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQI 284
G + GFD+ +N++LD++ E + S T Q LG +++GDN+ ++ +
Sbjct: 45 GCIIGFDEYMNLVLDDA-EEIHSKTKSRKQ--LGRIMLKGDNITLLQSV 90
>UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm3;
n=2; Saccharomyces cerevisiae|Rep: U6 snRNA-associated
Sm-like protein LSm3 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 89
Score = 34.3 bits (75), Expect = 0.85
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 90 VNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTS---GVAQVVLGLHIIRGD 260
+++ V + R +GTL+ FD NI+L ++ E ++ + ++ + IRGD
Sbjct: 12 LDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGD 71
Query: 261 NVAIVGQIDESIDSRLDL 314
V ++ E D +++
Sbjct: 72 TVTLISTPSEDDDGAVEI 89
>UniRef50_UPI00015BACE3 Cluster: Like-Sm ribonucleoprotein, core;
n=1; Ignicoccus hospitalis KIN4/I|Rep: Like-Sm
ribonucleoprotein, core - Ignicoccus hospitalis KIN4/I
Length = 91
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 90 VNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVA 269
V+ V V DG ++G L D T+N+ILD+ E S +G G +IRG V
Sbjct: 23 VDNVVLVRLKDGNEYVGKLVFTDNTMNLILDDCTE--LSPETGEPVAKYGRIMIRGSYVL 80
Query: 270 IV 275
+
Sbjct: 81 FI 82
>UniRef50_A7EV69 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 166
Score = 33.9 bits (74), Expect = 1.1
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
L + +++T+ + T+D R F G+ K D +NIIL E++E
Sbjct: 29 LHSLLSKTLLIHTTDNRMFRGSFKCTDSDLNIILSETYE 67
>UniRef50_A3LXX4 Cluster: Predicted protein; n=3;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 142
Score = 33.9 bits (74), Expect = 1.1
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +3
Query: 60 IRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVA 224
I + + + ++ + + T D R FIG+L FD+ +N++L ++ E + S V+
Sbjct: 6 ITKTTKMSDLIHYRLKISTIDNRFFIGSLLAFDKHLNLVLSDTEETRITKKSIVS 60
>UniRef50_Q20YQ3 Cluster: Short-chain dehydrogenase/reductase SDR
precursor; n=1; Rhodopseudomonas palustris BisB18|Rep:
Short-chain dehydrogenase/reductase SDR precursor -
Rhodopseudomonas palustris (strain BisB18)
Length = 247
Score = 33.5 bits (73), Expect = 1.5
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +3
Query: 198 VFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDS 302
+F + SG+A V L+ RGD++ ++G+ DE++ S
Sbjct: 7 IFGAASGIAVQVARLYAERGDSLVLIGRSDETLSS 41
>UniRef50_A5P2Y6 Cluster: Putative uncharacterized protein; n=4;
cellular organisms|Rep: Putative uncharacterized protein
- Methylobacterium sp. 4-46
Length = 1080
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 60 IRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLG 239
IR+ + ++ V Q +++ + R G ++G QT+ LD + R+ ++ GV + V G
Sbjct: 252 IRIRALVDELVAQREAIVANAER-VRGAIQGTHQTLTQELDTAASRIVAAVDGVGERVTG 310
Query: 240 LHIIRGDNV-AIVGQIDESIDSRL 308
RG+ + A +G+ E I + L
Sbjct: 311 SLGARGEEITAALGRRGEEITASL 334
>UniRef50_Q4V6D7 Cluster: IP05148p; n=2; Drosophila
melanogaster|Rep: IP05148p - Drosophila melanogaster
(Fruit fly)
Length = 99
Score = 33.5 bits (73), Expect = 1.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 90 VNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERV 200
V++ + V+ DGR IG L+ DQ N++L + ER+
Sbjct: 34 VDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERI 70
>UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6;
Trypanosomatidae|Rep: Lsm7p protein, putative -
Leishmania major
Length = 91
Score = 33.5 bits (73), Expect = 1.5
Identities = 18/66 (27%), Positives = 38/66 (57%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
LE Y+++ + V++ G G LKGFD +N++L ++ ++ + V ++ G ++RG
Sbjct: 18 LEKYLDRKI-VVSQKGHEVHGVLKGFDNNVNLVLADA--ELWHRDTHVRKI--GACVVRG 72
Query: 258 DNVAIV 275
V ++
Sbjct: 73 GPVNLI 78
>UniRef50_Q8SS46 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN F; n=1;
Encephalitozoon cuniculi|Rep: SMALL NUCLEAR
RIBONUCLEOPROTEIN F - Encephalitozoon cuniculi
Length = 81
Score = 33.5 bits (73), Expect = 1.5
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L+ N++V V G+ + GTL D NI+LDE ER G A V +G IR
Sbjct: 18 LQRMKNRSVRVALKWGQVYEGTLVASDNYFNILLDECTER-----EGEASVKIGEVSIRC 72
Query: 258 DNVAIVGQI 284
+N+ + ++
Sbjct: 73 NNIKRICEV 81
>UniRef50_O42978 Cluster: U6 snRNP-associated protein Lsm5; n=4;
Eukaryota|Rep: U6 snRNP-associated protein Lsm5 -
Schizosaccharomyces pombe (Fission yeast)
Length = 80
Score = 33.5 bits (73), Expect = 1.5
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQ 227
++ + + VI R F GTL GFD +NI+L + E + + +GV +
Sbjct: 11 IDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE--YDTVTGVTE 58
>UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 126
Score = 33.5 bits (73), Expect = 1.5
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE--RVFSSTSGVAQVV---LGL 242
L Y + + V GR G LKG+D + ++LDE+ E R +S + + LGL
Sbjct: 41 LAKYKDTKIRVKLMGGRLVTGVLKGYDPLMTLVLDETVEYLRDLEDSSIILKDQTRDLGL 100
Query: 243 HIIRGDNVAIVGQIDES 293
+IRG + + +D S
Sbjct: 101 TVIRGTVLLSLSPVDGS 117
>UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)
homolog; n=1; Methanopyrus kandleri|Rep: Small nuclear
ribonucleoprotein (SnRNP) homolog - Methanopyrus
kandleri
Length = 73
Score = 33.5 bits (73), Expect = 1.5
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L ++++ V V G+ G L FD +N++LD+ E ++V LG +IRG
Sbjct: 7 LRDFLDDIVIVELKTGKTLRGRLVSFDGHLNLVLDDCVE-----IDEDSEVRLGRVLIRG 61
Query: 258 DNVAIV 275
D+V ++
Sbjct: 62 DSVTLI 67
>UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10;
Archaea|Rep: Putative snRNP Sm-like protein -
Archaeoglobus fulgidus
Length = 77
Score = 33.5 bits (73), Expect = 1.5
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
L + V V GR F GTL G+D +N++L ++ E +G +G +IRG
Sbjct: 9 LNRSLKSPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEE----IQNGEVVRKVGSVVIRG 64
Query: 258 DNVAIV 275
D V V
Sbjct: 65 DTVVFV 70
>UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces
cerevisiae YER146w LSM5 Sm-like; n=1; Debaryomyces
hansenii|Rep: Similar to sp|P40089 Saccharomyces
cerevisiae YER146w LSM5 Sm-like - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 93
Score = 33.1 bits (72), Expect = 2.0
Identities = 16/66 (24%), Positives = 36/66 (54%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRG 257
++ + + V+ ++ + F GTL GFD +N++L+ E F + +V+ + ++ G
Sbjct: 27 IDKSIGHKIQVLMTNDKEFKGTLIGFDDYVNMVLENVEE--FDNEGPKGKVIKKM-LLNG 83
Query: 258 DNVAIV 275
VA++
Sbjct: 84 SQVAML 89
>UniRef50_A6R2S6 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 251
Score = 33.1 bits (72), Expect = 2.0
Identities = 12/40 (30%), Positives = 28/40 (70%)
Frame = +3
Query: 168 NIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQID 287
N++L + ER+++ A + G++++RG+NV ++G++D
Sbjct: 157 NLVLQGTVERLYAGNL-FADIQRGIYLVRGENVLLLGEVD 195
>UniRef50_UPI0000DB6CA6 Cluster: PREDICTED: similar to
neuroblastoma-amplified protein; n=1; Apis mellifera|Rep:
PREDICTED: similar to neuroblastoma-amplified protein -
Apis mellifera
Length = 1579
Score = 32.7 bits (71), Expect = 2.6
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +3
Query: 63 RMASGLENYVNQTVSVITSDGRNFIGTLK-GFDQTINIILDESHERVFSSTS----GVAQ 227
R+ SG+++ + ++I + +N LK +++T+N+ILD S E SS S +
Sbjct: 1022 RLVSGVKSNIQNCANLIETK-KNEQSLLKVSYEKTVNLILDASKEYFNSSKSLIDFNMEL 1080
Query: 228 VVLGLHIIRGDNVAIVGQID 287
LH+I DN I + D
Sbjct: 1081 AKTCLHLIEDDNAQIKEEYD 1100
>UniRef50_Q0AVS0 Cluster: CheW protein; n=1; Syntrophomonas wolfei
subsp. wolfei str. Goettingen|Rep: CheW protein -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 159
Score = 32.7 bits (71), Expect = 2.6
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +3
Query: 105 SVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQI 284
S TS+ R+ + ++G QT+ II+DE E + ST + + I D + VG++
Sbjct: 72 SETTSESRSVVVEVEG--QTVGIIVDEVSEVLRLSTESIEPPPAVIGGIAADYLTGVGKL 129
Query: 285 DESIDSRLDLGNIKAE 332
D+ + LD+ I E
Sbjct: 130 DDRLLILLDMDRILNE 145
>UniRef50_Q9FI15 Cluster: Similarity to small nuclear
ribonucleoprotein; n=6; Viridiplantae|Rep: Similarity to
small nuclear ribonucleoprotein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 254
Score = 32.7 bits (71), Expect = 2.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 69 ASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
+S + ++N + V DGR IG FD+ +N++L + E
Sbjct: 6 SSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEE 47
>UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 95
Score = 32.7 bits (71), Expect = 2.6
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +3
Query: 108 VITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQID 287
++ +D G L GFD+ +N++LD + E A LG +++G+N+ +V ++
Sbjct: 35 LVENDNLRIQGKLAGFDEYLNLVLDRAVE---YDRKTKATKELGKILLKGENIVLVRTLE 91
Query: 288 E 290
+
Sbjct: 92 D 92
>UniRef50_A2BK21 Cluster: Putative uncharacterized protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Putative
uncharacterized protein - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 152
Score = 32.7 bits (71), Expect = 2.6
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 63 RMASGLENYVNQTVSVITSDGRNFIGTLKGFDQ-TINIILDE 185
R + L+N V + V V+ +G+ + GTL GFD +N++L +
Sbjct: 12 RFLAELQNLVGKRVEVVLVNGQRYRGTLLGFDHPELNLVLGD 53
>UniRef50_Q1VR11 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 195
Score = 32.3 bits (70), Expect = 3.4
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 284 YLPDYCHIVSSDYVKSKYYL 225
YL D C+ V SD +KSKYYL
Sbjct: 49 YLGDDCYFVDSDTIKSKYYL 68
>UniRef50_Q1MRA4 Cluster: ABC transporter ATP-binding protein; n=1;
Lawsonia intracellularis PHE/MN1-00|Rep: ABC transporter
ATP-binding protein - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 244
Score = 32.3 bits (70), Expect = 3.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 42 EFIYKIIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESH 191
+ + K+ + GLE+Y+NQ + +++ R I TL I+L + H
Sbjct: 106 QILQKLKELDGGLEDYINQPLKMLSGGQRQMIATLMAIISGRQILLLDEH 155
>UniRef50_Q92337 Cluster: ATP-binding cassette transporter abc1;
n=1; Schizosaccharomyces pombe|Rep: ATP-binding cassette
transporter abc1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 1427
Score = 32.3 bits (70), Expect = 3.4
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 153 FDQTINIILDESHERVFSSTSGVAQVVLGLHIIR--GDNVAIVGQIDESIDSRLDLGNI 323
FD T+ D +R F+S S + V+LGLH ++ G N I+G I + S++ L +I
Sbjct: 823 FDSTLASSSDNDEQRDFASNSSI--VLLGLHYLKYFGSNKYILGSILLVMMSQVSLASI 879
>UniRef50_A5WGB4 Cluster: Extradiol ring-cleavage dioxygenase, class
III enzyme, subunit B precursor; n=6;
Pseudomonadales|Rep: Extradiol ring-cleavage
dioxygenase, class III enzyme, subunit B precursor -
Psychrobacter sp. PRwf-1
Length = 256
Score = 31.9 bits (69), Expect = 4.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 372 YLLTSSNVPLVQVVLP*CFRGLICYQLTRLFARL 271
+L ++VP+VQ+ LP F CYQL LF +L
Sbjct: 122 HLYPEADVPIVQLSLPKHFDAYACYQLGSLFEQL 155
>UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E
homolog; n=2; Bigelowiella natans|Rep: Small nucleolar
ribonucleoprotein E homolog - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 71
Score = 31.9 bits (69), Expect = 4.5
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 138 GTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQI 284
GTL+GFDQ +NI+L++S +S S ++ I+RG+++ V ++
Sbjct: 30 GTLRGFDQFLNIVLEKSS---YSKESNYFDIL----IVRGNSIMSVSKL 71
>UniRef50_Q6CWY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 191
Score = 31.9 bits (69), Expect = 4.5
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
L + ++ + V T DGR +IG L FD +N+++ + E
Sbjct: 13 LSDLIDYRIRVATHDGRVYIGQLMAFDAYMNLVMGDCVE 51
>UniRef50_Q2HFG8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 189
Score = 31.9 bits (69), Expect = 4.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
LE +N+ + V T+D R F GT D N+IL ++E
Sbjct: 17 LERLINKNLRVTTTDSRMFWGTFVCTDHESNLILKHAYE 55
>UniRef50_Q483J5 Cluster: Major facilitator family transporter; n=1;
Colwellia psychrerythraea 34H|Rep: Major facilitator
family transporter - Colwellia psychrerythraea (strain
34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 397
Score = 31.5 bits (68), Expect = 6.0
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 57 IIRMASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVL 236
++ + + +E + NQ + I S F G + G TI I H RVF++ + + + +
Sbjct: 24 LLGIRASIEGFSNQQIGFIMS--AYFFGFMVGSANTIKAINHVGHVRVFAALTALLSITI 81
Query: 237 GLH 245
LH
Sbjct: 82 LLH 84
>UniRef50_Q26HT4 Cluster: TonB-dependent outer membrane receptor;
n=1; Flavobacteria bacterium BBFL7|Rep: TonB-dependent
outer membrane receptor - Flavobacteria bacterium BBFL7
Length = 911
Score = 31.5 bits (68), Expect = 6.0
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 81 ENYVNQTVSVITSDGRNFI-GTLKGFDQTINIILDESHERVFSSTSGVAQVVL 236
+NY+N V +G F+ GT++ T N+ LD+ ++ TS + QV L
Sbjct: 314 DNYLNVYGLVTFDNGYRFVDGTIRNTGSTGNVFLDQDFQKYQYETSQIGQVDL 366
>UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E,
putative; n=1; Tetrahymena thermophila SB210|Rep: Small
nuclear ribonucleoprotein E, putative - Tetrahymena
thermophila SB210
Length = 140
Score = 31.5 bits (68), Expect = 6.0
Identities = 14/51 (27%), Positives = 33/51 (64%)
Frame = +3
Query: 138 GTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDE 290
G + GFD+ +N++LDE+ E V T+ ++ G +++G+N+ ++ +++
Sbjct: 40 GKIIGFDEYMNMVLDETSE-VDCKTNQKREI--GRILLKGENITLIRNLEQ 87
>UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albicans
CaLSM6; n=3; Ascomycota|Rep: Similar to CA5853|CaLSM6
Candida albicans CaLSM6 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 84
Score = 31.5 bits (68), Expect = 6.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERV 200
L + +V+V +G ++G L+ D +NI+LDE+ E V
Sbjct: 21 LSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFV 61
>UniRef50_Q0UBA8 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 128
Score = 31.5 bits (68), Expect = 6.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHE 194
L ++ + + + SDGR F G +K D+ NIIL +HE
Sbjct: 31 LSQFIGKNLRIHASDGRVFGGQMKCTDKDQNIILALAHE 69
>UniRef50_A6R7U2 Cluster: Predicted protein; n=2;
Eurotiomycetidae|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 104
Score = 31.5 bits (68), Expect = 6.0
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +3
Query: 90 VNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVA 269
++ +S +TS+ F GTL GFD +N++L++ E F T +Q L ++ G+N+
Sbjct: 36 ISPFLSSLTSNSE-FSGTLLGFDDYVNMVLEDVTE--FDYTG--SQTKLSKILLNGNNIC 90
Query: 270 IV 275
++
Sbjct: 91 ML 92
>UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1;
uncultured crenarchaeote|Rep: Putative uncharacterized
protein - uncultured crenarchaeote
Length = 89
Score = 31.5 bits (68), Expect = 6.0
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERV-------FSSTSGVAQ--- 227
L+ V + V V R+ G +KGFD+ +NI++ E+ E + +S G Q
Sbjct: 11 LQESVGKIVLVKLKGRRSVKGKIKGFDKQMNIVITEATEVIEQQSNNNDNSEKGKGQEQE 70
Query: 228 VVLGLHIIRGDNVAIV 275
+G +IRGDNV +
Sbjct: 71 TQVGDALIRGDNVITI 86
>UniRef50_Q00ZJ3 Cluster: Chromosome 10 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 10 contig 1, DNA
sequence - Ostreococcus tauri
Length = 98
Score = 31.1 bits (67), Expect = 7.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 66 MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDES 188
M S Y+ +V T DGR F+G L+ D+ N++L +
Sbjct: 1 MDSSTFPYIGAETAVETKDGRVFVGALRCVDKQRNVVLSNA 41
>UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 31.1 bits (67), Expect = 7.9
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 147 KGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIV 275
KGFD+ +N++LDE+ E + + LG +++GDN+ ++
Sbjct: 97 KGFDEYMNLVLDEAEEINIKKDT---RKSLGRILLKGDNITLM 136
>UniRef50_Q7ZUG0 Cluster: Small nuclear ribonucleoprotein E; n=18;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 92
Score = 31.1 bits (67), Expect = 7.9
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 138 GTLKGFDQTINIILDESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQI 284
G + GFD+ +N++LD++ E V T + LG +++GDN+ ++ +
Sbjct: 45 GCIIGFDEYMNLVLDDA-EEVHMKTKN--RKPLGRIMLKGDNITLLQSV 90
>UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=27; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm5 - Homo sapiens (Human)
Length = 91
Score = 31.1 bits (67), Expect = 7.9
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 78 LENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSST-SGVAQVVLGLHIIR 254
++ + + ++ + +GTL GFD +N++L++ E F T G L ++
Sbjct: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTE--FEITPEGRRITKLDQILLN 75
Query: 255 GDNVAIV 275
G+N+ ++
Sbjct: 76 GNNITML 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,570,230
Number of Sequences: 1657284
Number of extensions: 6514934
Number of successful extensions: 17188
Number of sequences better than 10.0: 172
Number of HSP's better than 10.0 without gapping: 16829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17143
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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