Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26e14
         (339 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0316 + 4251465-4251590,4251664-4251719,4252973-4253087,425...    30   0.53 
02_05_1326 - 35712102-35712473,35712608-35712720,35712944-357148...    29   1.2  
04_01_0046 + 510721-510790,511048-511121,511459-511729,511865-51...    27   2.8  
03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-13...    27   2.8  
08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273...    27   3.8  
06_01_1178 + 10131844-10131993,10132103-10132171,10132446-101324...    27   3.8  
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119...    26   8.7  
09_04_0591 + 18813557-18813663,18814332-18814392,18814526-188146...    26   8.7  
08_01_1027 - 10373760-10373837,10373918-10374201,10374286-10374394     26   8.7  

>04_01_0316 +
           4251465-4251590,4251664-4251719,4252973-4253087,
           4253174-4253417,4254189-4254325,4255006-4255065,
           4255336-4255460,4256021-4256048,4256267-4256336,
           4256513-4256565,4256966-4257025,4257498-4257544,
           4257617-4257741,4258572-4258686,4258778-4258826,
           4260415-4260471,4261126-4261209,4261363-4261442,
           4262005-4262094,4262252-4262375
          Length = 614

 Score = 29.9 bits (64), Expect = 0.53
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 73  VKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASS 180
           V+ G FK  ED   +   L++ N++ +FVA ++ +S
Sbjct: 332 VRCGNFKISEDYQAVNVTLKKDNMRTEFVAAEVDNS 367


>02_05_1326 - 35712102-35712473,35712608-35712720,35712944-35714857,
            35714942-35715135,35715237-35716786,35716946-35717049,
            35717258-35717399,35717692-35717910
          Length = 1535

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 193  NCKQAVIVNVDKKYKTTY-SESGSIPYTP 276
            N +QA I+  D KY  ++ ++ GS+PY P
Sbjct: 1270 NSEQAAIITEDVKYTESFLNKPGSLPYAP 1298


>04_01_0046 +
           510721-510790,511048-511121,511459-511729,511865-512243,
           512550-512771,513130-513259,514311-514367,514756-515046
          Length = 497

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 282 WSRGIWYRPRLAVRRFVFFVNINYHSLF 199
           WS G++Y P+ A  R +F   I   SLF
Sbjct: 290 WSLGVFYEPQYAKARMMFARLIKIFSLF 317


>03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-132773,
            132883-132996,133065-133193,133293-133469,133555-133746,
            134844-134981,135327-135559,135900-136003,136633-136727,
            136817-137053,137801-137922,138252-138354,138750-138826,
            138909-139017,139107-139253,139953-140000,140292-140492,
            140589-140738,140917-141002,141088-141193,141278-141373,
            141759-141911,142647-142819,142923-142986,144056-144193,
            144548-144595,144690-144836,144907-144968,146540-146645,
            147357-147461,147548-147679,147765-147974,148070-148171,
            148261-148398
          Length = 1729

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = +1

Query: 121  YVLEQGNLQVKF----VAKDIASSLKYVNCKQAVIV 216
            Y LE  N  +K     +A+ IA +L Y NCK+ + V
Sbjct: 1174 YALESDNNTIKSSVHSIARTIAGNLAYANCKEPLCV 1209


>08_02_0210 +
           14324539-14324609,14324735-14325740,14325838-14327390,
           14327473-14327601,14328345-14328510
          Length = 974

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +1

Query: 121 YVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKK 231
           +V++     ++ + KD A+ +K+  C+Q V+   DK+
Sbjct: 59  WVVDYRQCTLESLEKDFAARVKWGRCQQVVVYGYDKR 95


>06_01_1178 +
           10131844-10131993,10132103-10132171,10132446-10132451,
           10132571-10132930,10133983-10134201,10134905-10135054
          Length = 317

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 220 VDKKYKTTYSESGSIPYTPAPDNVVKXGD 306
           +D++   +YS   S+ YTPAP   ++  D
Sbjct: 50  MDRRSNPSYSRRASMVYTPAPAKKIEGSD 78


>11_06_0458 +
           23808402-23808469,23808800-23809684,23810011-23811961,
           23812210-23812285,23813064-23813072,23813243-23813335,
           23813578-23813581,23813780-23814703,23814926-23815909,
           23816073-23816118,23816376-23816951,23817253-23817798,
           23817820-23818416
          Length = 2252

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 190 VNCKQAVIVNVDKKYKTTYSESGSIPYTPAP-DNVVKXGD 306
           VNCK   +V +D++    Y+E  ++     P D ++K  D
Sbjct: 193 VNCKSNHVVPIDRRLPALYAELDALVGIDGPRDEIIKSLD 232


>09_04_0591 +
           18813557-18813663,18814332-18814392,18814526-18814639,
           18814923-18815054,18815380-18815774,18815896-18815995,
           18816099-18816158,18816240-18816326,18816511-18816639,
           18816888-18817187
          Length = 494

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 157 VAKDIASSLKYVNCKQAVIVNVDKKYKTTYSESGSIPYTPAPDNVVKXGDPLY 315
           +++DI S +  V CK   +   D +Y T+ S S S   T +P N      P Y
Sbjct: 169 LSEDILSCIAAVYCKLGSVPLQDSEYITSPSPSVSSSSTFSPRNRNDSWSPRY 221


>08_01_1027 - 10373760-10373837,10373918-10374201,10374286-10374394
          Length = 156

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 228 KIQNDVQRVGVYTIYPGSRQRGQAR*PTVPAAA 326
           +++++V+R  +  I+P  R+ G AR PT  AAA
Sbjct: 95  ELESEVRREIMEHIFPLLRRSGNARPPTPAAAA 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,055,013
Number of Sequences: 37544
Number of extensions: 134729
Number of successful extensions: 321
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)