Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26e11
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.66 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.66 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.2  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = -2

Query: 256 IVFIVRIIGITQFPVRPEFKFEKFVAKLSLVSNI--ISYV--KIRRHFAQSFKFILENFH 89
           +  + +++GI QFP+   F F      L   S    +SY+     R  +  FK+I +   
Sbjct: 55  LTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAG 114

Query: 88  FSG 80
           ++G
Sbjct: 115 YTG 117


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = -2

Query: 256 IVFIVRIIGITQFPVRPEFKFEKFVAKLSLVSNI--ISYV--KIRRHFAQSFKFILENFH 89
           +  + +++GI QFP+   F F      L   S    +SY+     R  +  FK+I +   
Sbjct: 11  LTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAG 70

Query: 88  FSG 80
           ++G
Sbjct: 71  YTG 73


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 558 LILKCSPIKENTR 520
           L++K S IKENTR
Sbjct: 108 LLIKLSEIKENTR 120


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 327 PKSCTKTIACGHNLIGLVG 383
           P +CT     G+  +GLVG
Sbjct: 141 PAACTPDSRVGYGSVGLVG 159


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 555 LSLYKNYNLLFLSNKIF 605
           +SLY + N L L +KIF
Sbjct: 1   MSLYSSINSLVLISKIF 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,413
Number of Sequences: 336
Number of extensions: 2635
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)