Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26d24
         (393 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132673-1|AAI32674.1|  713|Homo sapiens striatin, calmodulin bi...    54   2e-07
BC126221-1|AAI26222.1|  713|Homo sapiens striatin, calmodulin bi...    54   2e-07
BC106879-1|AAI06880.1|  731|Homo sapiens STRN protein protein.         52   5e-07
BC106878-1|AAI06879.1|  755|Homo sapiens STRN protein protein.         52   5e-07
AJ223814-1|CAA11560.1|  780|Homo sapiens striatin protein.             52   5e-07
AC007404-1|AAY24273.1|  163|Homo sapiens unknown protein.              52   5e-07
U17989-1|AAB81551.1|  713|Homo sapiens GS2NA protein.                  50   3e-06
BC034604-1|AAH34604.1|  753|Homo sapiens striatin, calmodulin bi...    46   3e-05
AF212940-1|AAF29527.1|  753|Homo sapiens zinedin protein.              46   3e-05
AB209003-1|BAD92240.1|  755|Homo sapiens Zinedin variant protein.      46   3e-05

>BC132673-1|AAI32674.1|  713|Homo sapiens striatin, calmodulin
           binding protein 3 protein.
          Length = 713

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +2

Query: 299 EPSQSVQYSIPGILHFIQHEWARFELXRSXW 391
           E S+  QY+IPGILH+IQHEWARFE+ R+ W
Sbjct: 56  ELSRPQQYTIPGILHYIQHEWARFEMERAHW 86


>BC126221-1|AAI26222.1|  713|Homo sapiens striatin, calmodulin
           binding protein 3 protein.
          Length = 713

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +2

Query: 299 EPSQSVQYSIPGILHFIQHEWARFELXRSXW 391
           E S+  QY+IPGILH+IQHEWARFE+ R+ W
Sbjct: 56  ELSRPQQYTIPGILHYIQHEWARFEMERAHW 86


>BC106879-1|AAI06880.1|  731|Homo sapiens STRN protein protein.
          Length = 731

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +2

Query: 317 QYSIPGILHFIQHEWARFELXRSXW 391
           QYS+PGILHF+QHEWARFE+ R+ W
Sbjct: 34  QYSLPGILHFLQHEWARFEVERAQW 58


>BC106878-1|AAI06879.1|  755|Homo sapiens STRN protein protein.
          Length = 755

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +2

Query: 317 QYSIPGILHFIQHEWARFELXRSXW 391
           QYS+PGILHF+QHEWARFE+ R+ W
Sbjct: 21  QYSLPGILHFLQHEWARFEVERAQW 45


>AJ223814-1|CAA11560.1|  780|Homo sapiens striatin protein.
          Length = 780

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +2

Query: 317 QYSIPGILHFIQHEWARFELXRSXW 391
           QYS+PGILHF+QHEWARFE+ R+ W
Sbjct: 46  QYSLPGILHFLQHEWARFEVERAQW 70


>AC007404-1|AAY24273.1|  163|Homo sapiens unknown protein.
          Length = 163

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +2

Query: 317 QYSIPGILHFIQHEWARFELXRSXW 391
           QYS+PGILHF+QHEWARFE+ R+ W
Sbjct: 46  QYSLPGILHFLQHEWARFEVERAQW 70


>U17989-1|AAB81551.1|  713|Homo sapiens GS2NA protein.
          Length = 713

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +2

Query: 299 EPSQSVQYSIPGILHFIQHEWARFELXRSXW 391
           E S+  Q +IPGILH+IQHEWARFE+ R+ W
Sbjct: 56  ELSRPQQNTIPGILHYIQHEWARFEMERAHW 86


>BC034604-1|AAH34604.1|  753|Homo sapiens striatin, calmodulin
           binding protein 4 protein.
          Length = 753

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +2

Query: 323 SIPGILHFIQHEWARFELXRSXW 391
           S+PGILHFIQHEWARFE  ++ W
Sbjct: 64  SLPGILHFIQHEWARFEAEKARW 86


>AF212940-1|AAF29527.1|  753|Homo sapiens zinedin protein.
          Length = 753

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +2

Query: 323 SIPGILHFIQHEWARFELXRSXW 391
           S+PGILHFIQHEWARFE  ++ W
Sbjct: 64  SLPGILHFIQHEWARFEAEKARW 86


>AB209003-1|BAD92240.1|  755|Homo sapiens Zinedin variant protein.
          Length = 755

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +2

Query: 323 SIPGILHFIQHEWARFELXRSXW 391
           S+PGILHFIQHEWARFE  ++ W
Sbjct: 59  SLPGILHFIQHEWARFEAEKARW 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,252,685
Number of Sequences: 237096
Number of extensions: 1079937
Number of successful extensions: 1316
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)