Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26d23
(202 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 22 0.54
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 22 0.54
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 1.6
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 20 2.9
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 20 2.9
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 19 3.8
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 19 6.6
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 19 6.6
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 19 6.6
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 19 6.6
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 19 6.6
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 18 8.8
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 22.2 bits (45), Expect = 0.54
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 117 CVLSFGCTFILKIL 76
C + FGC F LK++
Sbjct: 102 CSVIFGCIFALKVI 115
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 22.2 bits (45), Expect = 0.54
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 117 CVLSFGCTFILKIL 76
C + FGC F LK++
Sbjct: 102 CSVIFGCIFALKVI 115
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 20.6 bits (41), Expect = 1.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -1
Query: 97 HVYIENFMHEFQANVVQAT 41
H YI++ EF+A + + T
Sbjct: 403 HAYIDDMFQEFKATLPRYT 421
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 19.8 bits (39), Expect = 2.9
Identities = 5/9 (55%), Positives = 9/9 (100%)
Frame = -2
Query: 30 PHRLRVKPK 4
PHR+++KP+
Sbjct: 17 PHRMQIKPQ 25
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 19.8 bits (39), Expect = 2.9
Identities = 5/9 (55%), Positives = 9/9 (100%)
Frame = -2
Query: 30 PHRLRVKPK 4
PHR+++KP+
Sbjct: 17 PHRMQIKPQ 25
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 19.4 bits (38), Expect = 3.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 168 SAPTKNH*NFNILLNE 121
S PT++H + ++LNE
Sbjct: 355 SCPTRSHAVWEMVLNE 370
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 18.6 bits (36), Expect = 6.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 14 TRKRCGRVSRCLHD 55
TRK CG R HD
Sbjct: 225 TRKVCGVWKRIPHD 238
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 18.6 bits (36), Expect = 6.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 160 HEKPLKLQHFIKRTMR 113
HE P ++ F+K R
Sbjct: 310 HETPEEMMEFLKSVFR 325
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 18.6 bits (36), Expect = 6.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 160 HEKPLKLQHFIKRTMR 113
HE P ++ F+K R
Sbjct: 543 HETPEEMMEFLKSVFR 558
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 18.6 bits (36), Expect = 6.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 160 HEKPLKLQHFIKRTMR 113
HE P ++ F+K R
Sbjct: 543 HETPEEMMEFLKSVFR 558
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 18.6 bits (36), Expect = 6.6
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -2
Query: 105 FGCTFILKILCTSFRPMSCRQRETRPHRLRV 13
F T+++ CT R ++ H LRV
Sbjct: 498 FVTTYLMFDYCTVLRVQRFNNYQSLAHYLRV 528
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 18.2 bits (35), Expect = 8.8
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 128 NKMLKFQWFFVGALLVNAARALKKK 202
N M + L+VN A ALK +
Sbjct: 165 NDMCSLYYILQITLIVNYALALKNR 189
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,085
Number of Sequences: 336
Number of extensions: 723
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used: 2371622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -