Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26d23
(202 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF117888-1|AAD49195.1| 2548|Homo sapiens myosin-IXa protein. 28 4.8
AB209841-1|BAD93078.1| 1105|Homo sapiens myosin IXA variant prot... 28 4.8
BC146814-1|AAI46815.1| 1254|Homo sapiens DOCK9 protein protein. 27 8.4
AL589765-15|CAI17176.1| 557|Homo sapiens tudor and KH domain co... 27 8.4
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 27 8.4
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 27 8.4
AL161420-1|CAI39569.1| 2068|Homo sapiens RP11-155N3.2 protein. 27 8.4
AL139084-2|CAI13370.1| 2068|Homo sapiens RP11-155N3.2 protein. 27 8.4
AK127329-1|BAC86933.1| 1393|Homo sapiens protein ( Homo sapiens ... 27 8.4
AF527605-1|AAM90306.1| 2069|Homo sapiens zizimin1 protein. 27 8.4
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 27 8.4
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 27 8.4
AB028981-1|BAA83010.2| 2095|Homo sapiens KIAA1058 protein protein. 27 8.4
>AF117888-1|AAD49195.1| 2548|Homo sapiens myosin-IXa protein.
Length = 2548
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -1
Query: 172 QQRAHEKPLKLQHFIKRTMRSQLWMHVYI--ENFMHEFQANVV 50
Q+R H + L Q ++R + Q W V + ++F+H QA+V+
Sbjct: 1006 QERQHLQDLLHQEVLRRIILLQRWFRVLLCRQHFLHLRQASVI 1048
>AB209841-1|BAD93078.1| 1105|Homo sapiens myosin IXA variant protein.
Length = 1105
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -1
Query: 172 QQRAHEKPLKLQHFIKRTMRSQLWMHVYI--ENFMHEFQANVV 50
Q+R H + L Q ++R + Q W V + ++F+H QA+V+
Sbjct: 962 QERQHLQDLLHQEVLRRIILLQRWFRVLLCRQHFLHLRQASVI 1004
>BC146814-1|AAI46815.1| 1254|Homo sapiens DOCK9 protein protein.
Length = 1254
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 65 KLVHKIFNINVHPKLRTHRSF---NKMLKFQWFFVGALLVNAARAL 193
K VH+ ++ L+ F NK+LK+ WFF L+ + A+ L
Sbjct: 930 KTVHEELTKSMTTILKPSADFLTSNKLLKYSWFFFDVLIKSMAQHL 975
>AL589765-15|CAI17176.1| 557|Homo sapiens tudor and KH domain
containing protein.
Length = 557
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 53 DIGLKLVHKIFNINVHPKLRTHRSFNKMLK 142
DIGL+LVHK + I + + +R+ MLK
Sbjct: 477 DIGLELVHKGYAIELPEDIEENRAVPDMLK 506
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 53 DIGLKLVHKIFNINVHPKLRTHRSFNKMLK 142
DIGL+LVHK + I + + +R+ MLK
Sbjct: 436 DIGLELVHKGYAIELPEDIEENRAVPDMLK 465
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 53 DIGLKLVHKIFNINVHPKLRTHRSFNKMLK 142
DIGL+LVHK + I + + +R+ MLK
Sbjct: 481 DIGLELVHKGYAIELPEDIEENRAVPDMLK 510
>AL161420-1|CAI39569.1| 2068|Homo sapiens RP11-155N3.2 protein.
Length = 2068
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 65 KLVHKIFNINVHPKLRTHRSF---NKMLKFQWFFVGALLVNAARAL 193
K VH+ ++ L+ F NK+LK+ WFF L+ + A+ L
Sbjct: 929 KTVHEELTKSMTTILKPSADFLTSNKLLKYSWFFFDVLIKSMAQHL 974
>AL139084-2|CAI13370.1| 2068|Homo sapiens RP11-155N3.2 protein.
Length = 2068
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 65 KLVHKIFNINVHPKLRTHRSF---NKMLKFQWFFVGALLVNAARAL 193
K VH+ ++ L+ F NK+LK+ WFF L+ + A+ L
Sbjct: 929 KTVHEELTKSMTTILKPSADFLTSNKLLKYSWFFFDVLIKSMAQHL 974
>AK127329-1|BAC86933.1| 1393|Homo sapiens protein ( Homo sapiens cDNA
FLJ45400 fis, clone BRHIP3028570. ).
Length = 1393
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 65 KLVHKIFNINVHPKLRTHRSF---NKMLKFQWFFVGALLVNAARAL 193
K VH+ ++ L+ F NK+LK+ WFF L+ + A+ L
Sbjct: 941 KTVHEELTKSMTTILKPSADFLTSNKLLKYSWFFFDVLIKSMAQHL 986
>AF527605-1|AAM90306.1| 2069|Homo sapiens zizimin1 protein.
Length = 2069
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 65 KLVHKIFNINVHPKLRTHRSF---NKMLKFQWFFVGALLVNAARAL 193
K VH+ ++ L+ F NK+LK+ WFF L+ + A+ L
Sbjct: 930 KTVHEELTKSMTTILKPSADFLTSNKLLKYSWFFFDVLIKSMAQHL 975
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 53 DIGLKLVHKIFNINVHPKLRTHRSFNKMLK 142
DIGL+LVHK + I + + +R+ MLK
Sbjct: 481 DIGLELVHKGYAIELPEDIEENRAVPDMLK 510
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 53 DIGLKLVHKIFNINVHPKLRTHRSFNKMLK 142
DIGL+LVHK + I + + +R+ MLK
Sbjct: 481 DIGLELVHKGYAIELPEDIEENRAVPDMLK 510
>AB028981-1|BAA83010.2| 2095|Homo sapiens KIAA1058 protein protein.
Length = 2095
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 65 KLVHKIFNINVHPKLRTHRSF---NKMLKFQWFFVGALLVNAARAL 193
K VH+ ++ L+ F NK+LK+ WFF L+ + A+ L
Sbjct: 956 KTVHEELTKSMTTILKPSADFLTSNKLLKYSWFFFDVLIKSMAQHL 1001
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,686,750
Number of Sequences: 237096
Number of extensions: 378319
Number of successful extensions: 703
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 76,859,062
effective HSP length: 45
effective length of database: 66,189,742
effective search space used: 1389984582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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