Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26d21
(476 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542107-1|CAG46904.1| 204|Homo sapiens TM4SF13 protein. 115 1e-25
BC033863-1|AAH33863.1| 204|Homo sapiens tetraspanin 13 protein. 115 1e-25
AY358995-1|AAQ89354.1| 204|Homo sapiens NET-6 protein. 115 1e-25
AF120265-1|AAD17294.1| 204|Homo sapiens tetraspan NET-6 protein. 115 1e-25
AF100759-1|AAD43023.1| 204|Homo sapiens transmembrane 4 superfa... 115 1e-25
U81031-2|AAC39524.2| 210|Homo sapiens SAS protein. 114 2e-25
U01160-1|AAA17782.1| 210|Homo sapiens SAS protein. 114 2e-25
CR407647-1|CAG28575.1| 210|Homo sapiens SAS protein. 114 2e-25
BC010377-1|AAH10377.1| 210|Homo sapiens tetraspanin 31 protein. 114 2e-25
AB209699-1|BAD92936.1| 205|Homo sapiens sarcoma amplified seque... 114 2e-25
AL670729-3|CAH71673.1| 6620|Homo sapiens obscurin, cytoskeletal ... 29 8.3
AL359510-13|CAI15072.1| 6620|Homo sapiens obscurin, cytoskeletal... 29 8.3
AL353593-3|CAI19285.1| 6620|Homo sapiens obscurin, cytoskeletal ... 29 8.3
AJ314906-1|CAC85753.1| 1040|Homo sapiens obscurin protein. 29 8.3
AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein. 29 8.3
>CR542107-1|CAG46904.1| 204|Homo sapiens TM4SF13 protein.
Length = 204
Score = 115 bits (276), Expect = 1e-25
Identities = 49/98 (50%), Positives = 70/98 (71%)
Frame = +3
Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
+CGGF CSKN L ALN+LY +V+ +LI + +G L+++L +VG ++A G+F
Sbjct: 2 VCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIAL 61
Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
VKHHQV+LFFYM+IL L+F+VQFS++CACLA+
Sbjct: 62 VGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLAL 99
>BC033863-1|AAH33863.1| 204|Homo sapiens tetraspanin 13 protein.
Length = 204
Score = 115 bits (276), Expect = 1e-25
Identities = 49/98 (50%), Positives = 70/98 (71%)
Frame = +3
Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
+CGGF CSKN L ALN+LY +V+ +LI + +G L+++L +VG ++A G+F
Sbjct: 2 VCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIAL 61
Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
VKHHQV+LFFYM+IL L+F+VQFS++CACLA+
Sbjct: 62 VGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLAL 99
>AY358995-1|AAQ89354.1| 204|Homo sapiens NET-6 protein.
Length = 204
Score = 115 bits (276), Expect = 1e-25
Identities = 49/98 (50%), Positives = 70/98 (71%)
Frame = +3
Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
+CGGF CSKN L ALN+LY +V+ +LI + +G L+++L +VG ++A G+F
Sbjct: 2 VCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIAL 61
Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
VKHHQV+LFFYM+IL L+F+VQFS++CACLA+
Sbjct: 62 VGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLAL 99
>AF120265-1|AAD17294.1| 204|Homo sapiens tetraspan NET-6 protein.
Length = 204
Score = 115 bits (276), Expect = 1e-25
Identities = 49/98 (50%), Positives = 70/98 (71%)
Frame = +3
Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
+CGGF CSKN L ALN+LY +V+ +LI + +G L+++L +VG ++A G+F
Sbjct: 2 VCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIAL 61
Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
VKHHQV+LFFYM+IL L+F+VQFS++CACLA+
Sbjct: 62 VGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLAL 99
>AF100759-1|AAD43023.1| 204|Homo sapiens transmembrane 4
superfamily protein protein.
Length = 204
Score = 115 bits (276), Expect = 1e-25
Identities = 49/98 (50%), Positives = 70/98 (71%)
Frame = +3
Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
+CGGF CSKN L ALN+LY +V+ +LI + +G L+++L +VG ++A G+F
Sbjct: 2 VCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIAL 61
Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
VKHHQV+LFFYM+IL L+F+VQFS++CACLA+
Sbjct: 62 VGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLAL 99
>U81031-2|AAC39524.2| 210|Homo sapiens SAS protein.
Length = 210
Score = 114 bits (274), Expect = 2e-25
Identities = 49/98 (50%), Positives = 71/98 (72%)
Frame = +3
Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
+CGGF CSKNAL ALN++Y++V+ +LI V +G+ LV+++ I+GG++A GVF
Sbjct: 2 VCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIAV 61
Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
V HHQV+LFFYM+IL L+F+ QF I+C+CLA+
Sbjct: 62 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAI 99
>U01160-1|AAA17782.1| 210|Homo sapiens SAS protein.
Length = 210
Score = 114 bits (274), Expect = 2e-25
Identities = 49/98 (50%), Positives = 71/98 (72%)
Frame = +3
Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
+CGGF CSKNAL ALN++Y++V+ +LI V +G+ LV+++ I+GG++A GVF
Sbjct: 2 VCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIAV 61
Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
V HHQV+LFFYM+IL L+F+ QF I+C+CLA+
Sbjct: 62 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAI 99
>CR407647-1|CAG28575.1| 210|Homo sapiens SAS protein.
Length = 210
Score = 114 bits (274), Expect = 2e-25
Identities = 49/98 (50%), Positives = 71/98 (72%)
Frame = +3
Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
+CGGF CSKNAL ALN++Y++V+ +LI V +G+ LV+++ I+GG++A GVF
Sbjct: 2 VCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIAV 61
Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
V HHQV+LFFYM+IL L+F+ QF I+C+CLA+
Sbjct: 62 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAI 99
>BC010377-1|AAH10377.1| 210|Homo sapiens tetraspanin 31 protein.
Length = 210
Score = 114 bits (274), Expect = 2e-25
Identities = 49/98 (50%), Positives = 71/98 (72%)
Frame = +3
Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
+CGGF CSKNAL ALN++Y++V+ +LI V +G+ LV+++ I+GG++A GVF
Sbjct: 2 VCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIAV 61
Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
V HHQV+LFFYM+IL L+F+ QF I+C+CLA+
Sbjct: 62 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAI 99
>AB209699-1|BAD92936.1| 205|Homo sapiens sarcoma amplified sequence
variant protein.
Length = 205
Score = 114 bits (274), Expect = 2e-25
Identities = 49/98 (50%), Positives = 71/98 (72%)
Frame = +3
Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
+CGGF CSKNAL ALN++Y++V+ +LI V +G+ LV+++ I+GG++A GVF
Sbjct: 32 VCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIAV 91
Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
V HHQV+LFFYM+IL L+F+ QF I+C+CLA+
Sbjct: 92 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAI 129
>AL670729-3|CAH71673.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 29.1 bits (62), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 379 APASPNMEIKMRNTPHASIPPTMGKLVTRD 290
APA+P+++ + + P A++ P +G L T+D
Sbjct: 4837 APAAPSVKPQQQQEPLAAVRPPLGDLSTKD 4866
>AL359510-13|CAI15072.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 29.1 bits (62), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 379 APASPNMEIKMRNTPHASIPPTMGKLVTRD 290
APA+P+++ + + P A++ P +G L T+D
Sbjct: 4837 APAAPSVKPQQQQEPLAAVRPPLGDLSTKD 4866
>AL353593-3|CAI19285.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 29.1 bits (62), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 379 APASPNMEIKMRNTPHASIPPTMGKLVTRD 290
APA+P+++ + + P A++ P +G L T+D
Sbjct: 4837 APAAPSVKPQQQQEPLAAVRPPLGDLSTKD 4866
>AJ314906-1|CAC85753.1| 1040|Homo sapiens obscurin protein.
Length = 1040
Score = 29.1 bits (62), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 379 APASPNMEIKMRNTPHASIPPTMGKLVTRD 290
APA+P+++ + + P A++ P +G L T+D
Sbjct: 408 APAAPSVKPQQQQEPLAAVRPPLGDLSTKD 437
>AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.
Length = 6620
Score = 29.1 bits (62), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 379 APASPNMEIKMRNTPHASIPPTMGKLVTRD 290
APA+P+++ + + P A++ P +G L T+D
Sbjct: 4837 APAAPSVKPQQQQEPLAAVRPPLGDLSTKD 4866
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,554,754
Number of Sequences: 237096
Number of extensions: 1601873
Number of successful extensions: 2967
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2967
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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