Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26d21
         (476 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060360-1|AAL25399.1|  228|Drosophila melanogaster LD03691p pro...   146   1e-35
AF274020-1|AAF90146.1|  228|Drosophila melanogaster tetraspanin ...   146   1e-35
AE014297-4028|AAN14096.1|  248|Drosophila melanogaster CG6323-PB...   146   1e-35
AE014297-4027|AAF56643.1|  228|Drosophila melanogaster CG6323-PA...   146   1e-35
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P...    30   1.9  
AY070554-1|AAL48025.1|  771|Drosophila melanogaster LD30968p pro...    28   5.7  
AE014297-1946|AAF55136.1| 1332|Drosophila melanogaster CG6752-PA...    28   5.7  
Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subuni...    27   9.9  

>AY060360-1|AAL25399.1|  228|Drosophila melanogaster LD03691p
           protein.
          Length = 228

 Score =  146 bits (355), Expect = 1e-35
 Identities = 69/98 (70%), Positives = 79/98 (80%)
 Frame = +3

Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
           MCGGFTCSKNALIALNILYV++  +LI V VY +A+S+VTNLPIVGGILACGV       
Sbjct: 1   MCGGFTCSKNALIALNILYVMIGFLLIGVGVYARAASIVTNLPIVGGILACGVILICISM 60

Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
                 VKHHQVMLFFYM+ILF+LFL+QFSIA +CLAV
Sbjct: 61  LGLAGAVKHHQVMLFFYMIILFMLFLIQFSIASSCLAV 98


>AF274020-1|AAF90146.1|  228|Drosophila melanogaster tetraspanin 97E
           protein.
          Length = 228

 Score =  146 bits (355), Expect = 1e-35
 Identities = 69/98 (70%), Positives = 79/98 (80%)
 Frame = +3

Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
           MCGGFTCSKNALIALNILYV++  +LI V VY +A+S+VTNLPIVGGILACGV       
Sbjct: 1   MCGGFTCSKNALIALNILYVMIGFLLIGVGVYARAASIVTNLPIVGGILACGVILICISM 60

Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
                 VKHHQVMLFFYM+ILF+LFL+QFSIA +CLAV
Sbjct: 61  LGLAGAVKHHQVMLFFYMIILFMLFLIQFSIASSCLAV 98


>AE014297-4028|AAN14096.1|  248|Drosophila melanogaster CG6323-PB,
           isoform B protein.
          Length = 248

 Score =  146 bits (355), Expect = 1e-35
 Identities = 69/98 (70%), Positives = 79/98 (80%)
 Frame = +3

Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
           MCGGFTCSKNALIALNILYV++  +LI V VY +A+S+VTNLPIVGGILACGV       
Sbjct: 1   MCGGFTCSKNALIALNILYVMIGFLLIGVGVYARAASIVTNLPIVGGILACGVILICISM 60

Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
                 VKHHQVMLFFYM+ILF+LFL+QFSIA +CLAV
Sbjct: 61  LGLAGAVKHHQVMLFFYMIILFMLFLIQFSIASSCLAV 98


>AE014297-4027|AAF56643.1|  228|Drosophila melanogaster CG6323-PA,
           isoform A protein.
          Length = 228

 Score =  146 bits (355), Expect = 1e-35
 Identities = 69/98 (70%), Positives = 79/98 (80%)
 Frame = +3

Query: 183 MCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXXXXX 362
           MCGGFTCSKNALIALNILYV++  +LI V VY +A+S+VTNLPIVGGILACGV       
Sbjct: 1   MCGGFTCSKNALIALNILYVMIGFLLIGVGVYARAASIVTNLPIVGGILACGVILICISM 60

Query: 363 XXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAV 476
                 VKHHQVMLFFYM+ILF+LFL+QFSIA +CLAV
Sbjct: 61  LGLAGAVKHHQVMLFFYMIILFMLFLIQFSIASSCLAV 98


>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
           protein.
          Length = 2695

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +2

Query: 188 WRFHLFEECFDRVEHSLRGCSKHLDFSHSLWASVIPGYQLAHCRWY 325
           WR  ++++ F   EH L+  S HL  +  L   +     LAH   Y
Sbjct: 438 WRSQIYQQLFTHAEHKLKDTSSHLVRNLRLQLPLFEWPNLAHIENY 483


>AY070554-1|AAL48025.1|  771|Drosophila melanogaster LD30968p
           protein.
          Length = 771

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 329 SMWSISHLNLHIGACRSSQASPSYAVLLHGNTIP 430
           S+W    L LH G CRS   + ++  LLH N  P
Sbjct: 385 SVWQGGSLPLHQGLCRSRSRNETHTGLLH-NVAP 417


>AE014297-1946|AAF55136.1| 1332|Drosophila melanogaster CG6752-PA
            protein.
          Length = 1332

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 329  SMWSISHLNLHIGACRSSQASPSYAVLLHGNTIP 430
            S+W    L LH G CRS   + ++  LLH N  P
Sbjct: 946  SVWQGGSLPLHQGLCRSRSRNETHTGLLH-NVAP 978


>Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subunit of
            RNA polymeraseI (A) protein.
          Length = 1644

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 217  KAFFEQVKPPHILKASNNFVIKKILIL 137
            + FF+Q+ PP ILK SN     KI+++
Sbjct: 1308 QTFFKQLIPPPILKVSNASRTTKIVVI 1334


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,739,048
Number of Sequences: 53049
Number of extensions: 459025
Number of successful extensions: 1040
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)