Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26d18
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   1.9  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    25   2.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.4  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 64  NNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQ 159
           NNI   P +       SLP P+  SP +P++Q
Sbjct: 37  NNIGVLPASKMPTSYPSLPAPIVPSPGAPIQQ 68


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 253 CCC*CCAPTDWP 218
           CCC CCA ++ P
Sbjct: 548 CCCFCCASSNGP 559


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -2

Query: 236 RSNGLAEKV--RVGKEMRVGGLMLDFGG*RTGDSGELATGVGKDLTR 102
           R N +   V  R G++ R G ++ D G  R+GD G  + G G D  +
Sbjct: 262 RGNAIPSMVVDRRGEDAR-GNIISDGGRIRSGDGGRDSRGGGVDAAK 307


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,785
Number of Sequences: 2352
Number of extensions: 13070
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)