Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26d15
         (478 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   2.5  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   4.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   4.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   4.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.7  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 383 RSTAAPRIFECLCISSNTQNGISKLLAKTTIW*GAP 276
           RS   P+I E    +  +Q+ I+++ A  T+W   P
Sbjct: 278 RSDEGPQITELEPETIESQDAITRIYAIATMWHETP 313


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 314 YLYHFACLMKYKDIQKYEVQQLIE 385
           +L   ACL  Y   Q+Y V Q I+
Sbjct: 6   FLLALACLKTYVSSQEYLVPQNID 29


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 314 YLYHFACLMKYKDIQKYEVQQLIE 385
           +L   ACL  Y   Q+Y V Q I+
Sbjct: 6   FLLALACLKTYVSSQEYLVPQNID 29


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 383 RSTAAPRIFECLCISSNTQNGISKLLAKTTIW*GAP 276
           RS   P+I E    +  +Q+ I+++ A  T+W   P
Sbjct: 511 RSDEGPQITELEPETIESQDAITRIYACGTMWHETP 546


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 383 RSTAAPRIFECLCISSNTQNGISKLLAKTTIW*GAP 276
           RS   P+I E    +  +Q+ I+++ A  T+W   P
Sbjct: 511 RSDEGPQITELEPETIESQDAITRIYACGTMWHETP 546


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 409 HGLATVSHRIYGQNH 453
           HG  T SH  Y QN+
Sbjct: 291 HGHNTSSHNYYAQNY 305


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 91  YLFRKYYRMSYGRPMRQVYLFC*TQTGAS 5
           +L RK +  S+GRP         +QTG S
Sbjct: 238 HLERKAWVASFGRPKMTPQSLLPSQTGLS 266


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 50  WSSVRHSVIFSK*IIGSSASVSALTYNDAVAGA 148
           +SS+ HS+  S  ++ S   +   TY   + GA
Sbjct: 215 YSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGA 247


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 12/51 (23%), Positives = 17/51 (33%)
 Frame = -3

Query: 245 ETNTTNSCLCNEKKAASAVSWRLAKRSCCICVRRRPQRRCTLAPTRTPTSL 93
           E +T N C  N  K   A+         C C  +   + C +     P  L
Sbjct: 413 EIDTINECDSNPCKHLDAICQDKLGDYACYCPPKHTGKNCEIYDRGFPGGL 463


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,059
Number of Sequences: 336
Number of extensions: 2201
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)