Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26d06
(556 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5; Nucleopo... 158 9e-38
UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7; Nucleopo... 110 2e-23
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 79 9e-14
UniRef50_Q77K64 Cluster: Cg30 protein; n=3; Nucleopolyhedrovirus... 56 4e-07
UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua MNPV... 53 5e-06
UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum nucleopolyhe... 49 6e-05
UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis bil... 49 8e-05
UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: C... 48 1e-04
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 47 3e-04
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 40 0.029
UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura granulov... 38 0.16
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 38 0.21
UniRef50_A1YJ68 Cluster: Cg30; n=1; Spodoptera frugiperda MNPV|R... 38 0.21
UniRef50_Q8QLD4 Cluster: CG30; n=3; Nucleopolyhedrovirus|Rep: CG... 37 0.36
UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, wh... 36 0.63
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 35 1.1
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 35 1.1
UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12... 35 1.5
UniRef50_UPI0000D557CB Cluster: PREDICTED: similar to ubiquitin-... 34 2.6
UniRef50_Q1L721 Cluster: E3 ubiquitin-protein ligase RNF138; n=4... 33 5.9
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 32 7.8
UniRef50_Q75LZ2 Cluster: Putative polyprotein; n=2; Oryza sativa... 32 7.8
UniRef50_A0DI49 Cluster: Chromosome undetermined scaffold_51, wh... 32 7.8
>UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Bombyx mori nuclear polyhedrosis virus (BmNPV)
Length = 266
Score = 158 bits (383), Expect = 9e-38
Identities = 72/83 (86%), Positives = 73/83 (87%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
MEFVKLQCNICFSVAEIKNYFMQPIDRLT+IPVLELDTCKHQLCSMC PCP
Sbjct: 1 MEFVKLQCNICFSVAEIKNYFMQPIDRLTMIPVLELDTCKHQLCSMCIRKIRKRKKTPCP 60
Query: 433 LCRVESLHFNVYSINRNVVDVIK 501
LCRVESLHFNVYSINRNVVDVIK
Sbjct: 61 LCRVESLHFNVYSINRNVVDVIK 83
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 497 LKCSVTSVAQWNKINDNFDA 556
+KCSVTSVAQWNKIN NFDA
Sbjct: 82 IKCSVTSVAQWNKINGNFDA 101
>UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 249
Score = 110 bits (265), Expect = 2e-23
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 3/86 (3%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC---XXXXXXXXXX 423
M+ V+LQC+IC SV EIKNYF+QP+D +TI+P++EL TC+HQLC MC
Sbjct: 1 MDTVRLQCHICCSVGEIKNYFLQPVDAITILPIVELHTCRHQLCVMCVRKIAQRGRDKRV 60
Query: 424 PCPLCRVESLHFNVYSINRNVVDVIK 501
CP+CR ++ HFNVYS+NRN VDV++
Sbjct: 61 ECPMCRRKNAHFNVYSVNRNSVDVLR 86
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 78.6 bits (185), Expect = 9e-14
Identities = 35/49 (71%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = +2
Query: 2 RNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLR-NDFI 145
RNVLKFEGDTR L+RTL YEEYP YVPLFLGYQ++N +N+ LR N+F+
Sbjct: 268 RNVLKFEGDTRALERTLGRYEEYPMYVPLFLGYQLVNLQNDILRANNFL 316
>UniRef50_Q77K64 Cluster: Cg30 protein; n=3;
Nucleopolyhedrovirus|Rep: Cg30 protein - Helicoverpa
armigera NPV
Length = 283
Score = 56.4 bits (130), Expect = 4e-07
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
M + + C +C A I N Q L ++P++ L +C H LC+MC CP
Sbjct: 1 MNSITVNCCVCLGRATIYNNDQQ---ELLVLPLIVLQSCLHALCTMCLKRMRKSLIVKCP 57
Query: 433 LCRVESLHFNVYSINRNVVDVI 498
LCR ++ ++ Y I+ N V+V+
Sbjct: 58 LCRSINIKYSYYCISGNTVNVV 79
>UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua
MNPV|Rep: ORF76 cg30 - Spodoptera exigua MNPV
Length = 461
Score = 52.8 bits (121), Expect = 5e-06
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXP 426
ME + L C++C S EIK F ++ ++P+ LD CKH LC MC
Sbjct: 1 MESITLGCSVCMSEVEIKAGFGDVDPQMFVVPLFILDECKHVLCLMCCKSIQDGRRRAIT 60
Query: 427 CPLCRVES 450
CP CRV S
Sbjct: 61 CPTCRVSS 68
>UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: CG30 - Agrotis segetum nuclear
polyhedrosis virus (AsNPV)
Length = 453
Score = 49.2 bits (112), Expect = 6e-05
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXP 426
ME V L C +C + +K + L I+P L L C H LC C
Sbjct: 8 MESVTLNCGVCLTDVLVKANETTRKENLYIVPFLSLIECNHALCVHCVKNLQTSNRRAIS 67
Query: 427 CPLCRVESLHFNVYSINRN 483
CP+CR S F + SIN N
Sbjct: 68 CPMCREVSTKFRLISINNN 86
>UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis
bilineata nucleopolyhedrosis virus|Rep: Cg30/ac88-like
protein - Clanis bilineata nucleopolyhedrosis virus
Length = 346
Score = 48.8 bits (111), Expect = 8e-05
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +1
Query: 256 EFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPL 435
E V L C +C S + I + + D + P+ +L +C H +C +C CPL
Sbjct: 39 EQVTLSCCVCLSESTINDTKDELDDNMFAFPLAQLVSCLHSICVVCAVSLKQRQVISCPL 98
Query: 436 CRVESLHFNVYSINRNVV 489
CR +S ++++N+ +
Sbjct: 99 CRTQSNKLVLFNVNKQTL 116
>UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: Cg30
- Ecotropis obliqua NPV
Length = 269
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTII-PVLELDTCKHQLCSMCXXXXXXXXXXPC 429
M V L CNIC+S+ +I++ + I P+ L C H LC C C
Sbjct: 1 MTSVTLNCNICYSLTKIESVPSSNTKNVMYIYPLTVLSMCLHTLCFTCVSKLAKGKELKC 60
Query: 430 PLCRVESLHFNVYSINR 480
P CR + V+++NR
Sbjct: 61 PFCRTINTKVRVHAVNR 77
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 5 NVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNF 127
NVLKF+G+ L ++LS YE YP VPL LG Q +N+ + +
Sbjct: 260 NVLKFKGNANALQKSLSRYEPYPIVVPLMLGTQTLNTSSAY 300
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 40.3 bits (90), Expect = 0.029
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 2 RNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIIN 112
RNV++F G++ L++ L+ YE YP V LFLG Q IN
Sbjct: 255 RNVIQFIGNSDALNKKLARYECYPLVVQLFLGSQTIN 291
>UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura
granulovirus|Rep: Cg30-2 - Spodoptera litura
granulovirus
Length = 360
Score = 37.9 bits (84), Expect = 0.16
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 259 FVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLC 438
F L+C +C + E F+ + + +IP+L + C H LC+ C CP C
Sbjct: 4 FTILKCPVCLNKCEAD--FVSE-NTVKLIPMLTIAECNHHLCAACLYSIANNYEITCPTC 60
Query: 439 R 441
R
Sbjct: 61 R 61
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 37.5 bits (83), Expect = 0.21
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 5 NVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQI 106
NVLKF G+ L + L+ Y+ Y VPL LG QI
Sbjct: 261 NVLKFRGNANALQKNLNRYDPYSLEVPLMLGTQI 294
>UniRef50_A1YJ68 Cluster: Cg30; n=1; Spodoptera frugiperda MNPV|Rep:
Cg30 - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 458
Score = 37.5 bits (83), Expect = 0.21
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
M+ V +QC +C I + ++ + ++P L+L+ C H +C C CP
Sbjct: 1 MDLVTIQCIVCLVETTIDH---TKVEEVFVVPFLKLNNCNHVMCVDC--IKNMTTPLSCP 55
Query: 433 LCRVESL 453
+CR S+
Sbjct: 56 VCRRVSI 62
>UniRef50_Q8QLD4 Cluster: CG30; n=3; Nucleopolyhedrovirus|Rep: CG30
- Mamestra configurata NPV-A
Length = 279
Score = 36.7 bits (81), Expect = 0.36
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC 393
M+ V +QCNIC +K D + I+P+L L C H C C
Sbjct: 1 MKSVTIQCNICLEQVVVKK--PDDEDFMYIVPLLTLTACNHHYCVEC 45
>UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 222
Score = 35.9 bits (79), Expect = 0.63
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 349 VLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVE 447
V E+D CKHQ+C C CP CR +
Sbjct: 87 VCEIDVCKHQICLTCIKEWAEKYKTQCPYCRAK 119
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 35.1 bits (77), Expect = 1.1
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 8 VLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLRNDFISRANPNAT 169
V +F+G+ L LS YE YP VPL +G +++ + + + + + NP T
Sbjct: 259 VPRFQGNAVALQTNLSRYEHYPLVVPLMVGNEVLITRDTYKKPPY---PNPTLT 309
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 5 NVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQII 109
NVLKF+G+ L +L Y++Y VPL LG I
Sbjct: 261 NVLKFQGNANALQLSLGKYDQYRIEVPLILGKDTI 295
>UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 374
Score = 35.1 bits (77), Expect = 1.1
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
M KL +CF ++ +P D ++PV L C H +C +C CP
Sbjct: 1 MNLEKLSELLCFQCGKLYESITKPDDEAILVPV--LGACLHSICILC--ATGLESPNSCP 56
Query: 433 LCRVESLHFNVYS 471
+C N+ S
Sbjct: 57 ICENPEAFGNIIS 69
>UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12.4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein R02E12.4 - Caenorhabditis elegans
Length = 639
Score = 34.7 bits (76), Expect = 1.5
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
+EF +QC+ICF V N+ +P+ L TCKH +C+ C CP
Sbjct: 19 LEFEDVQCHICFQV----NH--EPVTFL---------TCKHSICAGCAGRWLSSCSV-CP 62
Query: 433 LC--RVESLHFNVYSINRNVVDVIKMQRDE 516
+C RV +H N + + ++ +K+ ++
Sbjct: 63 MCRTRVREIHLN-DDLKKKSLEFLKLHPEQ 91
>UniRef50_UPI0000D557CB Cluster: PREDICTED: similar to
ubiquitin-like, containing PHD and RING finger domains,
1; n=1; Tribolium castaneum|Rep: PREDICTED: similar to
ubiquitin-like, containing PHD and RING finger domains,
1 - Tribolium castaneum
Length = 715
Score = 33.9 bits (74), Expect = 2.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 367 CKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRNVVDVIK 501
CKH +C C CP CR E V ++N N+ +V++
Sbjct: 661 CKHNVCKGCLKRSFAAEIYVCPCCRFELGETYVMTVNDNLGEVLR 705
>UniRef50_Q1L721 Cluster: E3 ubiquitin-protein ligase RNF138; n=4;
Xenopus|Rep: E3 ubiquitin-protein ligase RNF138 -
Xenopus laevis (African clawed frog)
Length = 222
Score = 32.7 bits (71), Expect = 5.9
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 295 AEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCR 441
+EI F+ P+ + + + TC+H C C CPLCR
Sbjct: 9 SEITEEFLCPVCQEILQTPVRTQTCRHVFCRKCFMLAMKSGGAYCPLCR 57
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 32.3 bits (70), Expect = 7.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 2 RNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQII 109
R V++FEG L GYE Y PL+LG ++I
Sbjct: 256 RTVVEFEGRATRRQEGLQGYEVYVVNRPLWLGTEVI 291
>UniRef50_Q75LZ2 Cluster: Putative polyprotein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Putative polyprotein -
Oryza sativa subsp. japonica (Rice)
Length = 2108
Score = 32.3 bits (70), Expect = 7.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 525 CATLVTLHFNHVHNVSVYAVNVEMQTFNPAQ 433
CA + + H H+H++ AVNV + PAQ
Sbjct: 1295 CALISSQHLQHLHSIDSVAVNVRPYRYTPAQ 1325
>UniRef50_A0DI49 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 384
Score = 32.3 bits (70), Expect = 7.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 343 IPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVESLHF 459
IP++ L CKH C C CP CR++ H+
Sbjct: 46 IPIV-LPDCKHTFCRDCLDAWVGQQAMNCPYCRIDVSHY 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,323,548
Number of Sequences: 1657284
Number of extensions: 7915939
Number of successful extensions: 18884
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 18487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18876
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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