Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26c12
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81513-12|CAE17799.1|  417|Caenorhabditis elegans Hypothetical p...    32   0.39 
AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical ...    30   1.6  
AF106575-17|AAD56300.2|  333|Caenorhabditis elegans Serpentine r...    28   6.3  
AF100307-7|AAC68934.1|  353|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z93390-5|CAJ76954.1|  219|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z93390-4|CAJ76953.1|  347|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z93390-3|CAB07676.1|  680|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>Z81513-12|CAE17799.1|  417|Caenorhabditis elegans Hypothetical
           protein F26D2.16 protein.
          Length = 417

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +1

Query: 199 IHPRRANCKVTRPRNNYSDPDNENDM-LHMTVLNSVFLNEHAKLYYRHLLRNDQAEARKT 375
           +H +  NC   R  +++S PD + D+   +  L       HA    R +L  ++  + + 
Sbjct: 148 VHAKELNCSQRRALSSFSQPDRKEDVKKFLNQLLKAIQLRHAGKILRAVLHTNRYRSCER 207

Query: 376 ILNADDVYECVLIKP 420
           I + ++V + ++  P
Sbjct: 208 IFSREEVIDAIVKTP 222


>AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical
           protein Y75B8A.4 protein.
          Length = 773

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +1

Query: 481 KIIIDTVIKYIGKLADDEYILIADRMYVDLIY 576
           K+ I T+ KY+ + ++D Y++IA ++  D +Y
Sbjct: 32  KLNIQTIEKYLTRSSNDNYVVIAYKVSTDKVY 63


>AF106575-17|AAD56300.2|  333|Caenorhabditis elegans Serpentine
           receptor, class h protein5 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/28 (35%), Positives = 21/28 (75%)
 Frame = -3

Query: 551 SAIKMYSSSASLPMYLMTVSMMIFKTPM 468
           S + + S+S S+P+Y++   ++IFK+P+
Sbjct: 15  STLHIISTSISVPIYIVAFWILIFKSPV 42


>AF100307-7|AAC68934.1|  353|Caenorhabditis elegans Hypothetical
           protein T12B5.10 protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +1

Query: 265 ENDMLHMTVLNSVFLNEHA-KLYYRHLLRNDQAEARKTILNADDVYECVLIKPIRTEHFR 441
           E + +     +   L++HA K+  R+   N + +  KT     +  +C+L+K IR  HF 
Sbjct: 141 EENFVERAAKDFKILSKHARKIDIRNFTEN-RRDIIKTFNEIWNTEKCILVKEIRLRHF- 198

Query: 442 SVDE 453
           S DE
Sbjct: 199 SFDE 202


>Z93390-5|CAJ76954.1|  219|Caenorhabditis elegans Hypothetical
           protein T23B5.1c protein.
          Length = 219

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 576 FRI*GHYFASERVHYQRR 629
           FRI GH F S+RVH+  R
Sbjct: 75  FRILGHLFYSDRVHFDAR 92


>Z93390-4|CAJ76953.1|  347|Caenorhabditis elegans Hypothetical
           protein T23B5.1b protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 576 FRI*GHYFASERVHYQRR 629
           FRI GH F S+RVH+  R
Sbjct: 203 FRILGHLFYSDRVHFDAR 220


>Z93390-3|CAB07676.1|  680|Caenorhabditis elegans Hypothetical
           protein T23B5.1a protein.
          Length = 680

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 576 FRI*GHYFASERVHYQRR 629
           FRI GH F S+RVH+  R
Sbjct: 536 FRILGHLFYSDRVHFDAR 553


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,552,824
Number of Sequences: 27780
Number of extensions: 271836
Number of successful extensions: 782
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)