Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26c02
         (589 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0634 - 25685216-25685329,25685407-25685511,25685681-256857...    28   6.3  

>11_06_0634 -
           25685216-25685329,25685407-25685511,25685681-25685740,
           25685827-25685965,25686056-25686240,25686328-25686411,
           25686499-25686621,25687088-25687267,25687364-25687433,
           25687520-25687616,25687695-25687770,25688259-25688348,
           25688383-25688529,25688647-25688715,25689004-25689177,
           25689266-25689336,25689409-25689557,25690723-25690774,
           25690865-25691120,25691196-25691287,25691420-25691541,
           25691909-25692679,25692883-25692940,25693068-25693107,
           25694462-25694595,25694685-25694793,25694896-25694991
          Length = 1220

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = +3

Query: 243 KEDPENTENIEQNQSTRLVPLFLRTRPSLAVLEKIYADVQDLLTEAKQQV*PDS*VIILK 422
           KE P+  +++ +    ++     +   SL +L K YA  + LLT+ KQQ+  D  V  LK
Sbjct: 743 KESPKAMKHLNKLFPNKISIQLPQVLISLVILFKYYAQDETLLTDWKQQL--DRDVETLK 800

Query: 423 YYSN 434
             SN
Sbjct: 801 AKSN 804


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,276,526
Number of Sequences: 37544
Number of extensions: 232832
Number of successful extensions: 523
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)