Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26c02
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19783-1|AAA03545.1| 188|Homo sapiens GPI-H protein. 69 9e-12
BT006804-1|AAP35450.1| 188|Homo sapiens phosphatidylinositol gl... 69 9e-12
BC071849-1|AAH71849.1| 188|Homo sapiens phosphatidylinositol gl... 69 9e-12
BC004100-1|AAH04100.1| 188|Homo sapiens phosphatidylinositol gl... 69 9e-12
AL713895-3|CAI10950.1| 759|Homo sapiens novel protein protein. 31 4.0
AL607128-2|CAI14188.1| 759|Homo sapiens novel protein protein. 31 4.0
AK027280-1|BAB55015.1| 427|Homo sapiens protein ( Homo sapiens ... 31 4.0
>L19783-1|AAA03545.1| 188|Homo sapiens GPI-H protein.
Length = 188
Score = 69.3 bits (162), Expect = 9e-12
Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +3
Query: 81 KKTVLIIPNVGIRSTQNYPT-RNLHTFVSWDRIEDIIINEVIVTSKVLYYLTILVKEDPE 257
++T+LII ++GI+ T +Y + + TF+ +++DI+INE I KV+YYL IL+K DP
Sbjct: 87 QETLLIIDSLGIQMTSSYASGKESTTFIEMGKVKDIVINEAIYMQKVIYYLCILLK-DP- 144
Query: 258 NTENIEQNQSTRLVPLFLRTRPSLAVLEKIYADVQDLLTEAK 383
+E + +++VP+F +P L L ++Y Q++L K
Sbjct: 145 ----VEPHGISQVVPVFQSAKPRLDCLIEVYRSCQEILAHQK 182
>BT006804-1|AAP35450.1| 188|Homo sapiens phosphatidylinositol
glycan, class H protein.
Length = 188
Score = 69.3 bits (162), Expect = 9e-12
Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +3
Query: 81 KKTVLIIPNVGIRSTQNYPT-RNLHTFVSWDRIEDIIINEVIVTSKVLYYLTILVKEDPE 257
++T+LII ++GI+ T +Y + + TF+ +++DI+INE I KV+YYL IL+K DP
Sbjct: 87 QETLLIIDSLGIQMTSSYASGKESTTFIEMGKVKDIVINEAIYMQKVIYYLCILLK-DP- 144
Query: 258 NTENIEQNQSTRLVPLFLRTRPSLAVLEKIYADVQDLLTEAK 383
+E + +++VP+F +P L L ++Y Q++L K
Sbjct: 145 ----VEPHGISQVVPVFQSAKPRLDCLIEVYRSCQEILAHQK 182
>BC071849-1|AAH71849.1| 188|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class H protein.
Length = 188
Score = 69.3 bits (162), Expect = 9e-12
Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +3
Query: 81 KKTVLIIPNVGIRSTQNYPT-RNLHTFVSWDRIEDIIINEVIVTSKVLYYLTILVKEDPE 257
++T+LII ++GI+ T +Y + + TF+ +++DI+INE I KV+YYL IL+K DP
Sbjct: 87 QETLLIIDSLGIQMTSSYASGKESTTFIEMGKVKDIVINEAIYMQKVIYYLCILLK-DP- 144
Query: 258 NTENIEQNQSTRLVPLFLRTRPSLAVLEKIYADVQDLLTEAK 383
+E + +++VP+F +P L L ++Y Q++L K
Sbjct: 145 ----VEPHGISQVVPVFQSAKPRLDCLIEVYRSCQEILAHQK 182
>BC004100-1|AAH04100.1| 188|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class H protein.
Length = 188
Score = 69.3 bits (162), Expect = 9e-12
Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +3
Query: 81 KKTVLIIPNVGIRSTQNYPT-RNLHTFVSWDRIEDIIINEVIVTSKVLYYLTILVKEDPE 257
++T+LII ++GI+ T +Y + + TF+ +++DI+INE I KV+YYL IL+K DP
Sbjct: 87 QETLLIIDSLGIQMTSSYASGKESTTFIEMGKVKDIVINEAIYMQKVIYYLCILLK-DP- 144
Query: 258 NTENIEQNQSTRLVPLFLRTRPSLAVLEKIYADVQDLLTEAK 383
+E + +++VP+F +P L L ++Y Q++L K
Sbjct: 145 ----VEPHGISQVVPVFQSAKPRLDCLIEVYRSCQEILAHQK 182
>AL713895-3|CAI10950.1| 759|Homo sapiens novel protein protein.
Length = 759
Score = 30.7 bits (66), Expect = 4.0
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +3
Query: 159 VSWDRIEDIIINEVIVTSKVLYYLTILVKEDPENTENIEQNQ----STRLVPLFLRTRPS 326
+ WD+ E + + E T V Y+L + DP T+ + Q + PL R PS
Sbjct: 64 LEWDKREWVKVYEDFSTFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALTFKPLVERNIPS 123
Query: 327 LAVLEKIYADVQ-DLLTE 377
+ D Q D LTE
Sbjct: 124 SVTAVEFLVDKQLDFLTE 141
>AL607128-2|CAI14188.1| 759|Homo sapiens novel protein protein.
Length = 759
Score = 30.7 bits (66), Expect = 4.0
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +3
Query: 159 VSWDRIEDIIINEVIVTSKVLYYLTILVKEDPENTENIEQNQ----STRLVPLFLRTRPS 326
+ WD+ E + + E T V Y+L + DP T+ + Q + PL R PS
Sbjct: 64 LEWDKREWVKVYEDFSTFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALTFKPLVERNIPS 123
Query: 327 LAVLEKIYADVQ-DLLTE 377
+ D Q D LTE
Sbjct: 124 SVTAVEFLVDKQLDFLTE 141
>AK027280-1|BAB55015.1| 427|Homo sapiens protein ( Homo sapiens
cDNA FLJ14374 fis, clone HEMBA1001635, weakly similar to
TESTIS SPECIFIC PROTEIN A. ).
Length = 427
Score = 30.7 bits (66), Expect = 4.0
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +3
Query: 159 VSWDRIEDIIINEVIVTSKVLYYLTILVKEDPENTENIEQNQ----STRLVPLFLRTRPS 326
+ WD+ E + + E T V Y+L + DP T+ + Q + PL R PS
Sbjct: 64 LEWDKREWVKVYEDFSTFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALTFKPLVERNIPS 123
Query: 327 LAVLEKIYADVQ-DLLTE 377
+ D Q D LTE
Sbjct: 124 SVTAVEFLVDKQLDFLTE 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,397,940
Number of Sequences: 237096
Number of extensions: 1357431
Number of successful extensions: 3414
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3414
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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