Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26c02
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    26   0.32 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   3.9  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   3.9  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   5.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   6.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.0  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   9.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.0  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 103 QMLVYAALRIIRPETYTPLYHG 168
           Q  VY  LR   PET+ P+ HG
Sbjct: 66  QPSVYPLLRFENPETHHPIRHG 87


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 243 KEDPENTENIEQNQSTRLVPLFLRTRPSLAVLEKI 347
           +E   N EN++   ST      L T P+L ++E+I
Sbjct: 9   QEKKNNVENLKGGGSTTPASPTLSTPPTLNLMEQI 43


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -2

Query: 165 MIQRCVSFWSDNSECCV---YQHLELSRLFFLN 76
           +I++CVS  +D  EC V   Y    L ++ FL+
Sbjct: 95  IIEQCVSKAADEDECMVARKYIDCALEKMKFLD 127


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -2

Query: 165 MIQRCVSFWSDNSECCV---YQHLELSRLFFLN 76
           +I++CVS  +D  EC V   Y    L ++ FL+
Sbjct: 95  IIEQCVSKAADEDECMVARKYIDCALEKMKFLD 127


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 251 IFFNQNSQVIKNFRRHNNFIYNNIFNS 171
           I  + +++ I N   +NN  YNN +N+
Sbjct: 314 IISSLSNKTIHNNNNYNNNNYNNNYNN 340


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +1

Query: 7   NQRNYIVPLNY 39
           NQ+N ++P+NY
Sbjct: 188 NQQNILIPVNY 198


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 161 YKGV*VSGRIILSAAYTNIWN 99
           YKG  V+ +II +  Y+N+ N
Sbjct: 86  YKGEQVAAKIIQTEKYSNMLN 106


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 31  LNYFETINLTVENG*IQKKQ 90
           + YFE  + T+ NG + ++Q
Sbjct: 460 ITYFEQFDTTINNGLLLEEQ 479


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 31  LNYFETINLTVENG*IQKKQ 90
           + YFE  + T+ NG + ++Q
Sbjct: 460 ITYFEQFDTTINNGLLLEEQ 479


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 242 NQNSQVIKNFRRHNNFIYNNIFNS 171
           N N +   N   +NN  YNN +N+
Sbjct: 326 NNNYKYNYNNNNYNNNNYNNNYNN 349


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 135 DNSECCVYQHLELSRLFFL 79
           +  EC  YQ+L L  ++++
Sbjct: 38  NKEECDYYQNLNLGEIYYI 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,790
Number of Sequences: 438
Number of extensions: 3395
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)