Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26b22
         (709 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6YR32 Cluster: Cation-transporting ATPase; n=4; Candid...    33   5.2  
UniRef50_Q54HW4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_A5N8S9 Cluster: Putative uncharacterized protein; n=1; ...    33   9.1  
UniRef50_Q4Y1J3 Cluster: Putative uncharacterized protein; n=6; ...    33   9.1  
UniRef50_Q5UQE4 Cluster: Uncharacterized protein R472; n=1; Acan...    33   9.1  

>UniRef50_Q6YR32 Cluster: Cation-transporting ATPase; n=4;
           Candidatus Phytoplasma|Rep: Cation-transporting ATPase -
           Onion yellows phytoplasma
          Length = 918

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 26/88 (29%), Positives = 43/88 (48%)
 Frame = -1

Query: 463 KHSFISNKNFISNVRKHFVRSDKITRAQTIQQSPGKNNRVNFCYIQTPTYPEFSIVYYSN 284
           KHSF S KN     +   +   KIT+  T Q++  +        IQ+ T P F   +   
Sbjct: 2   KHSF-SQKN---PEQSQALLQTKITKGLTSQEALQRLQINGKNQIQSLTKPTFWHQFQQQ 57

Query: 283 TKDFQ*LINIVSSTVHFTITILVSNSTD 200
            KDF  ++ ++++T++F I IL  N  +
Sbjct: 58  FKDFLVIVLLLAATINFVIGILQGNKEE 85


>UniRef50_Q54HW4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 778

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 20/83 (24%), Positives = 38/83 (45%)
 Frame = -1

Query: 547 YDFFLLTINYFGFSHYVYNSEHSTDNETKHSFISNKNFISNVRKHFVRSDKITRAQTIQQ 368
           Y F    INY+  ++ + N+ ++ +N   ++  +N N I N  K    S  I + ++   
Sbjct: 26  YYFNKNIINYYNNNNLIINNNNNNNNNNNNNNNNNNNSIINNNKRLF-STNILKEESNNN 84

Query: 367 SPGKNNRVNFCYIQTPTYPEFSI 299
               NN++N    ++P   E  I
Sbjct: 85  DNNNNNKINEKLFKSPLKNENEI 107


>UniRef50_A5N8S9 Cluster: Putative uncharacterized protein; n=1;
           Clostridium kluyveri DSM 555|Rep: Putative
           uncharacterized protein - Clostridium kluyveri DSM 555
          Length = 483

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 6/119 (5%)
 Frame = -1

Query: 550 LYDFFLLTINYFGFSHYVYNSEHSTDNETK------HSFISNKNFISNVRKHFVRSDKIT 389
           +Y FF   ++YF   +Y +N ++S   + K        +  NK +  ++   +  +  I 
Sbjct: 20  VYGFFKCALSYFKAFNYSFNRKYSLKTKAKLGEPAAEKYFFNKQY-EDLSNTYESAKSIN 78

Query: 388 RAQTIQQSPGKNNRVNFCYIQTPTYPEFSIVYYSNTKDFQ*LINIVSSTVHFTITILVS 212
               +      N +  F Y +  T  +  ++Y         LIN++  ++HF I  ++S
Sbjct: 79  SGNILMLKSQLNTKSYFTYYRVKTGQK--VIYILGN-----LINVICVSIHFLIVTIIS 130


>UniRef50_Q4Y1J3 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 630

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = -1

Query: 523 NYFGFSHYVYNSEHSTDNETKHSFISNKNFISNVRKHFVRSDKITRAQTIQQSPGKNNRV 344
           NY   +  ++ +++    +   S I NK++ +NV K    ++K+  A+ I+Q  G +N +
Sbjct: 159 NYLNGTKIIFINKNINTTKLLDSIILNKSYNNNVSK----NNKLLCAKKIKQQNGYHN-I 213

Query: 343 NFCYIQT-PTYPEFSIVYYSNTKDFQ*LINIVSSTVHFTITILVSNSTDTDRVVMNNHD 170
           NF   +T P+  +++I +    K +   ++ +SS  +F      SN ++T     N  +
Sbjct: 214 NFGIAKTHPSQHQYNITHRKKAKFY---LSTISSQ-NFKTRTCSSNESNTQANCSNKSE 268


>UniRef50_Q5UQE4 Cluster: Uncharacterized protein R472; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
           protein R472 - Mimivirus
          Length = 1700

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
 Frame = -1

Query: 571 YMIKIKDLYDFFLLTINYFGFSHYVYNSEHSTDNETKHSFISNKNFISNVRKHFVRSDKI 392
           Y+ +I D+ D  L  + + G S+    S +S  N  K +F+  +  I+     FV+S  +
Sbjct: 2   YVNQIDDIIDGILNKLYFEGLSND--ESFNSIVNSNKINFVEYREQINKFIDDFVKSIDL 59

Query: 391 TRAQTIQQSPGKNNRVNFCYIQTPTYPEFSIVYYSNT---KDFQ*LINIVSSTVHFTITI 221
           T  + I  +    NR+     +   Y  F  + Y+ T   KDF+  + I  S +  + T 
Sbjct: 60  TEIRKIINNKDNLNRIIDIIKRYVAYYYFLSIAYNYTGSLKDFRNNM-IQYSKLQESSTF 118

Query: 220 LVSNSTDTD 194
           ++ N  DT+
Sbjct: 119 IIRNFFDTE 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,260,295
Number of Sequences: 1657284
Number of extensions: 11627953
Number of successful extensions: 28100
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28066
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)