Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26b22
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    25   0.80 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.8  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -1

Query: 538 FLLTINYFGFSHYVYNSEHSTDNETKHSFISNKNFISNVR 419
           +L+ +  F F HY ++ + +    TK+  I  +N + N R
Sbjct: 4   YLIPLYLFLFVHYGWSEDTTHKYTTKYDNIDLENVVKNER 43


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/37 (18%), Positives = 19/37 (51%)
 Frame = +1

Query: 466 FRYLSNAHYCTHNAKNQNNLLLIEKNHINLLSLSYIF 576
           F Y+    YC +     ++ ++ +  +I +L L+ ++
Sbjct: 327 FTYVPMILYCVYTTATYDSFMIYKTTNIIILGLNVVY 363



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 319 SVFVYNKNLLYCFY 360
           S+F Y   +LYC Y
Sbjct: 325 SIFTYVPMILYCVY 338


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/37 (18%), Positives = 19/37 (51%)
 Frame = +1

Query: 466 FRYLSNAHYCTHNAKNQNNLLLIEKNHINLLSLSYIF 576
           F Y+    YC +     ++ ++ +  +I +L L+ ++
Sbjct: 52  FTYVPMILYCVYTTATYDSFMIYKTTNIIILGLNVVY 88



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 319 SVFVYNKNLLYCFY 360
           S+F Y   +LYC Y
Sbjct: 50  SIFTYVPMILYCVY 63


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +2

Query: 152 NYCTFLIVIIHDYAVGVSGIRHQDRDCEVYGGRY 253
           NYC FL    H   + +   R+Q    +++  RY
Sbjct: 140 NYCQFLYNCFHSTLLLMILSRYQRLKAQLWQNRY 173


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 580 PPIISSFLKVSQFHSTFEYCFYHS 651
           P II   ++ +    +F YC+Y+S
Sbjct: 256 PIIIGCLIQFNTIVFSFCYCYYNS 279


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 709 IKYLWXKCFILLIN*FYNHYCD 644
           + Y +  C I LI  F+   CD
Sbjct: 216 VPYCYINCLIYLIGGFWFMQCD 237


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 154 IILLQFYCSSSVIC 113
           I+++QF+CS   +C
Sbjct: 252 ILVVQFFCSLVALC 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,298
Number of Sequences: 336
Number of extensions: 3164
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)