BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26b22
(709 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030309-1|ABN49448.1| 846|Drosophila melanogaster RE10183p pro... 29 4.7
BT015295-1|AAT94524.1| 1300|Drosophila melanogaster GH02989p pro... 29 4.7
AE014298-3191|AAN09573.1| 1342|Drosophila melanogaster CG14616-P... 29 4.7
AE014298-3190|AAN09570.2| 1360|Drosophila melanogaster CG14616-P... 29 4.7
AE014298-3189|AAN09571.1| 1355|Drosophila melanogaster CG14616-P... 29 4.7
AE014298-3188|AAN09569.1| 1751|Drosophila melanogaster CG14616-P... 29 4.7
AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-P... 29 6.2
>BT030309-1|ABN49448.1| 846|Drosophila melanogaster RE10183p
protein.
Length = 846
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 133 CSSSVICNALVFCQSPVGCCH 71
C+S I AL F ++PV CCH
Sbjct: 783 CNSKSITQALDFVKNPVDCCH 803
>BT015295-1|AAT94524.1| 1300|Drosophila melanogaster GH02989p
protein.
Length = 1300
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 133 CSSSVICNALVFCQSPVGCCH 71
C+S I AL F ++PV CCH
Sbjct: 672 CNSKSITQALDFVKNPVDCCH 692
>AE014298-3191|AAN09573.1| 1342|Drosophila melanogaster CG14616-PE,
isoform E protein.
Length = 1342
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 133 CSSSVICNALVFCQSPVGCCH 71
C+S I AL F ++PV CCH
Sbjct: 690 CNSKSITQALDFVKNPVDCCH 710
>AE014298-3190|AAN09570.2| 1360|Drosophila melanogaster CG14616-PA,
isoform A protein.
Length = 1360
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 133 CSSSVICNALVFCQSPVGCCH 71
C+S I AL F ++PV CCH
Sbjct: 690 CNSKSITQALDFVKNPVDCCH 710
>AE014298-3189|AAN09571.1| 1355|Drosophila melanogaster CG14616-PD,
isoform D protein.
Length = 1355
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 133 CSSSVICNALVFCQSPVGCCH 71
C+S I AL F ++PV CCH
Sbjct: 690 CNSKSITQALDFVKNPVDCCH 710
>AE014298-3188|AAN09569.1| 1751|Drosophila melanogaster CG14616-PC,
isoform C protein.
Length = 1751
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 133 CSSSVICNALVFCQSPVGCCH 71
C+S I AL F ++PV CCH
Sbjct: 690 CNSKSITQALDFVKNPVDCCH 710
>AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-PB
protein.
Length = 1103
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/42 (23%), Positives = 25/42 (59%)
Frame = -1
Query: 538 FLLTINYFGFSHYVYNSEHSTDNETKHSFISNKNFISNVRKH 413
F L +NY+ + +Y YN+ ++ +N ++ +N N++ + +
Sbjct: 1051 FFLLLNYYYYYYYYYNN-NNNNNNNNNNHNNNANYLQHTNNN 1091
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,626,071
Number of Sequences: 53049
Number of extensions: 522795
Number of successful extensions: 1130
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -