Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26b20
         (293 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396...    28   1.5  
08_01_1005 - 10183796-10185183,10186673-10186859                       27   2.6  
11_06_0334 + 22437187-22437322,22437430-22437515,22437927-224380...    26   4.6  
09_04_0167 + 15290059-15290188,15290779-15292070                       26   6.1  
02_01_0066 + 482598-483761                                             26   6.1  

>03_01_0527 +
           3960982-3961290,3961371-3961464,3961898-3962084,
           3962194-3962449,3962561-3962773,3962856-3962942,
           3963089-3963223,3963296-3963409,3963507-3963754,
           3963824-3963904,3963979-3964210,3964340-3964438,
           3964513-3964701,3964928-3965023
          Length = 779

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 239 MWNKLLIIHWIIANTKKK 292
           +WN ++++HW   NTK K
Sbjct: 480 IWNSMMLVHWGNTNTKHK 497


>08_01_1005 - 10183796-10185183,10186673-10186859
          Length = 524

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -1

Query: 224 LINLHYEHHTHIVTNNKKKNRRIIY 150
           + +L +E  T I+ N ++KN+R++Y
Sbjct: 483 MASLSFEDQTPIIGNYQQKNKRVVY 507


>11_06_0334 +
           22437187-22437322,22437430-22437515,22437927-22438073,
           22438166-22438274,22439510-22439633,22439727-22439752,
           22439774-22440000,22440084-22440185
          Length = 318

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 9/21 (42%), Positives = 19/21 (90%)
 Frame = -3

Query: 282 VFAIIQWIISSLFHIIHIYID 220
           +FA++Q++IS+L +++H +ID
Sbjct: 117 IFALVQFVISALAYLVH-FID 136


>09_04_0167 + 15290059-15290188,15290779-15292070
          Length = 473

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 245 STSFTFTLINLHYEHHTHIVTNNKKKNRRIIY 150
           S+     L +L  E+ T I+ N ++KN R+I+
Sbjct: 425 SSQVCLALASLKSEYETSIIGNYQQKNLRVIF 456


>02_01_0066 + 482598-483761
          Length = 387

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 221 INLHYEHHTHIVTNNKKKNRRIIYL 147
           I++H   H   V NNKKKN R + L
Sbjct: 328 ISVHPFFHVAGVNNNKKKNDRFLLL 352


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,922,824
Number of Sequences: 37544
Number of extensions: 57266
Number of successful extensions: 88
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 328462236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)