Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26b19
         (378 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q39VJ0 Cluster: Putative uncharacterized protein; n=1; ...    33   2.3  
UniRef50_Q7UYV0 Cluster: Nitrate transport permease protein; n=1...    32   3.1  
UniRef50_A5KJP4 Cluster: Putative uncharacterized protein; n=1; ...    32   3.1  
UniRef50_A0RPF7 Cluster: Transcriptional regulator, BadM/Rrf2 fa...    32   4.1  
UniRef50_Q3DYH2 Cluster: Putative esterase; n=2; Chloroflexus|Re...    31   5.4  
UniRef50_Q8SA73 Cluster: Auxin-related protein; n=1; Oryza sativ...    31   5.4  
UniRef50_Q0JC65 Cluster: Os04g0489600 protein; n=4; Oryza sativa...    31   5.4  
UniRef50_UPI0000DB703D Cluster: PREDICTED: similar to ubiquitin ...    31   7.1  

>UniRef50_Q39VJ0 Cluster: Putative uncharacterized protein; n=1;
           Geobacter metallireducens GS-15|Rep: Putative
           uncharacterized protein - Geobacter metallireducens
           (strain GS-15 / ATCC 53774 / DSM 7210)
          Length = 741

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 180 NFVSSVKIIVRNISVYISTPWWSWRRSSKRMVLKS*ARAPTG*WQTMAYP 329
           NF  + K+   N   Y+S+ W  W +   R ++KS ARA     Q   YP
Sbjct: 493 NFNENKKLTANNNYAYLSSEWKDWFKELYRTLVKSAARAGFSEEQLYLYP 542


>UniRef50_Q7UYV0 Cluster: Nitrate transport permease protein; n=1;
           Pirellula sp.|Rep: Nitrate transport permease protein -
           Rhodopirellula baltica
          Length = 371

 Score = 32.3 bits (70), Expect = 3.1
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -1

Query: 345 VGTLCVDMPWF--ATTPWVPLLSSLIPFSWMSVA 250
           VG LC   PWF  A TP++ +   + P +W+ +A
Sbjct: 180 VGVLCGMSPWFNAAMTPFIQIFKPVSPLAWLPLA 213


>UniRef50_A5KJP4 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 263

 Score = 32.3 bits (70), Expect = 3.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 197 KNNCEKYISLYQHSVVVMATLIQEN 271
           +NNC  YIS   H+V++  TL++EN
Sbjct: 86  QNNCADYISAKAHTVIIDKTLLEEN 110


>UniRef50_A0RPF7 Cluster: Transcriptional regulator, BadM/Rrf2
           family; n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
           Transcriptional regulator, BadM/Rrf2 family -
           Campylobacter fetus subsp. fetus (strain 82-40)
          Length = 125

 Score = 31.9 bits (69), Expect = 4.1
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 165 KTIRSI*LRNFFVSILNDH-TTSVNIKETSYLQLFTEKNQKLFHILS 28
           KT+  I   + F ++ ND   TS+N++ +SY   F E N+KL  + S
Sbjct: 58  KTLDEITFYDIFYALENDFGLTSLNVEHSSYNLFFKEYNEKLTELFS 104


>UniRef50_Q3DYH2 Cluster: Putative esterase; n=2; Chloroflexus|Rep:
           Putative esterase - Chloroflexus aurantiacus J-10-fl
          Length = 269

 Score = 31.5 bits (68), Expect = 5.4
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -1

Query: 369 YSWSGTICVGTLCVDMPWFATTPWVPLLSSLIPFSWMSV 253
           Y+W G I VG  C D  W    P  P  +      W S+
Sbjct: 68  YNWPGAIVVGVWCTDQRWREYAPQKPFAALRQTRGWESI 106


>UniRef50_Q8SA73 Cluster: Auxin-related protein; n=1; Oryza
           sativa|Rep: Auxin-related protein - Oryza sativa (Rice)
          Length = 204

 Score = 31.5 bits (68), Expect = 5.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 260 IQENGIKELSKGTHGVVANHGISTHSVPTH 349
           I E+GI +L+   HG   +HG S  +V TH
Sbjct: 51  ISEDGIPDLTDSIHGAAHHHGRSEENVSTH 80


>UniRef50_Q0JC65 Cluster: Os04g0489600 protein; n=4; Oryza
           sativa|Rep: Os04g0489600 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 369

 Score = 31.5 bits (68), Expect = 5.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 260 IQENGIKELSKGTHGVVANHGISTHSVPTH 349
           I E+GI +L+   HG   +HG S  +V TH
Sbjct: 181 ISEDGIPDLTDSIHGAAHHHGRSEENVSTH 210


>UniRef50_UPI0000DB703D Cluster: PREDICTED: similar to ubiquitin
            specific protease 34; n=1; Apis mellifera|Rep: PREDICTED:
            similar to ubiquitin specific protease 34 - Apis
            mellifera
          Length = 3414

 Score = 31.1 bits (67), Expect = 7.1
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 373  AIFMVWHHMCWDTVCGYAMVCHYPVGALAQLFNTILLDERRHD 245
            A+ + W+H+C D     A++ H P       FN IL D    D
Sbjct: 2764 AVLLFWYHVCSDCPENVALILHNPHITKNIAFNYILADHEDQD 2806


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,133,174
Number of Sequences: 1657284
Number of extensions: 7673789
Number of successful extensions: 20225
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20213
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)