Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26b15
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0454 + 19199063-19200757,19202201-19202287 33 0.27
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 30 1.4
07_03_1151 + 24385272-24386543 30 1.9
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 29 2.5
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 29 2.5
06_01_0127 - 977667-978719,978875-979051 29 3.3
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713 29 3.3
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 29 4.4
02_05_0166 + 26412217-26413403,26413918-26414800 29 4.4
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 29 4.4
10_08_0299 - 16607152-16607322,16607465-16607785,16607870-166081... 28 5.8
07_01_0230 - 1679165-1681108 28 5.8
05_01_0210 + 1583176-1584177 28 5.8
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 28 5.8
09_02_0251 - 6282420-6282526,6282642-6283104,6283223-6283289,628... 28 7.6
02_05_0563 + 29998291-29998753,29999256-29999468,29999550-299996... 28 7.6
>12_02_0454 + 19199063-19200757,19202201-19202287
Length = 593
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Frame = +2
Query: 47 ASPKVKSD*RGSVSLSYFSRTIPIKKMRKRKSLKLNEEDSDGSGQGAE--PEEF-----Q 205
ASP D SY + K R+R + K +G G+ +E PEE +
Sbjct: 447 ASPAGAMDDDDDEDTSYEINNVKKKGRRRRAAKKGGTYADNGQGRKSENQPEESRHNNDE 506
Query: 206 DSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRK 316
+ +D SNE ++ S++ K NTKK +K
Sbjct: 507 NGADDKMEGPSSNEDSAAASKEDQQKGKTGNTKKNKK 543
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +2
Query: 80 SVSLSYFSRTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDAD---SNEP 250
S S+S R P+K+ + L D G G P + E +P + S P
Sbjct: 411 SKSMSISPRRSPVKRSAISPKISLISRSPDVQGHGRSPVRAPERSESRSPPREKSISMSP 470
Query: 251 ASRTSRKRVSKPPV 292
R++R+ S+ P+
Sbjct: 471 QRRSARRSKSRSPL 484
>07_03_1151 + 24385272-24386543
Length = 423
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 134 RKSLKLNEEDSDGSGQGAEPEEFQDSGE 217
+K+ +L+E D DG G+ E EE D GE
Sbjct: 61 KKTRRLSEFDGDGDGEEVEVEEGGDGGE 88
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 152 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK---PPVNNTKKKRK 316
N E+ +G +GA+ EE DSG+D + S++ +S +S SK PP KRK
Sbjct: 360 NAEEEEGE-EGADEEE-NDSGDDSDSSSSSSDNSSDSSESDDSKTVPPPTVLADLKRK 415
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 152 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK---PPVNNTKKKRK 316
N E+ +G +GA+ EE DSG+D + S++ +S +S SK PP KRK
Sbjct: 537 NAEEEEGE-EGADEEE-NDSGDDSDSSSSSSDNSSDSSESDDSKTVPPPTVLADLKRK 592
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 152 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK---PPVNNTKKKRK 316
N E+ +G +GA+ EE DSG+D + S++ +S +S SK PP KRK
Sbjct: 360 NAEEEEGE-EGADEEE-NDSGDDSDSSSSSSDNSSDSSESDDSKTVPPPTVLADLKRK 415
>06_01_0127 - 977667-978719,978875-979051
Length = 409
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 463 CTKAFPFRKFCLAEIRCKMGWRYCN 537
C + P+R+ CLA +C+ G Y N
Sbjct: 130 CARLGPYRRGCLANSQCQFGITYAN 154
>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
Length = 946
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 152 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK---PPVNNTKKKRK 316
N E+ + +GA+ EE DSG+D + S++ +S +S SK PP KRK
Sbjct: 360 NAEEEEEGEEGADEEE-NDSGDDSDSSSSSSDNSSDSSDSDDSKTVPPPTVLADLKRK 416
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 152 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK---PPVNNTKKKRK 316
N E+ +G +GA+ EE DSG+D + S++ +S S SK PP KRK
Sbjct: 360 NAEEEEGE-EGADEEE-NDSGDDSDSSSSSSDNSSDLSESGDSKTVPPPTVLADLKRK 415
>02_05_0166 + 26412217-26413403,26413918-26414800
Length = 689
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 137 KSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPP 289
KS+ LN GS Q ++ GE+ +S++ R+S VS PP
Sbjct: 28 KSVVLNPSREGGSSQEQYEKDLLAEGEESFRSEESSDEGGRSSFSGVSHPP 78
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 44 LASPKVKSD*RGSVSLS--YFSRTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGE 217
L S K+K + +G +S+S Y + ++ + S +EED S E + F D+
Sbjct: 1175 LHSLKIKDELQGRLSMSSNYLACSVINDNLETVDSSSPDEEDHRKSFS-VEEDSFMDALT 1233
Query: 218 DWTPDADSN 244
D+TPD N
Sbjct: 1234 DFTPDQSPN 1242
>10_08_0299 -
16607152-16607322,16607465-16607785,16607870-16608121,
16608298-16608435,16608544-16608651,16608814-16609014,
16609109-16609233,16609252-16609321,16609919-16610455
Length = 640
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 152 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNT 301
+E+D D G ++ +E +D GE + SNE R K VS V++T
Sbjct: 141 DEDDDDDDGDDSD-DEMEDDGERYNRIPLSNEVVLRGHTKVVSALAVDHT 189
>07_01_0230 - 1679165-1681108
Length = 647
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 293 SPVALIHVFC*YEMQVRSNRRPASN-LHQSPEILL 192
SP+ ++ F + ++V RRP +N H SP IL+
Sbjct: 506 SPLTDVYAFAIFVLEVTCGRRPINNYTHDSPTILV 540
>05_01_0210 + 1583176-1584177
Length = 333
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 RKRKSLKLNEEDSDGSGQGAE-PEEFQDSGEDWTPDADSNEPASRTSRKRVSK 283
RK+ K ++D DG G G E EE D D D S + S+KR K
Sbjct: 173 RKKVKGKDPDDDHDGGGDGDEDDEEEADQQVDEEDDGASGDTTRAGSKKRRRK 225
>02_05_0684 - 30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 164 SDGSGQGAEPEEFQDSGEDWTP--DADSNEPASRTSRKRVSKPPVNNTKKKR 313
+D SG + P SGEDW D+ SN R+S ++ +++ KR
Sbjct: 853 NDSSGAESSPRTSGQSGEDWRSAFDSASNGSVDRSSSHNETRSRSADSRGKR 904
>09_02_0251 -
6282420-6282526,6282642-6283104,6283223-6283289,
6283536-6283808,6284096-6284907,6285402-6285479,
6285586-6285636,6285737-6285817,6285903-6285982,
6288481-6288652
Length = 727
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 152 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRK 316
NEE+ + E EE QD PD + + RKR+ + ++N KK+K
Sbjct: 641 NEEEQLQEKETNEEEEIQD------PDQANTKGRKSIRRKRIVEQMIDNNNKKKK 689
>02_05_0563 +
29998291-29998753,29999256-29999468,29999550-29999667,
30000227-30000355,30000438-30000810,30000890-30001147,
30001192-30001227
Length = 529
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 80 SVSLSYFSRTIPIKKMRKRKSLKLNE 157
S+ + YF +P K+ RKRK KL+E
Sbjct: 437 SIGMVYFELLMPAKRERKRKLNKLSE 462
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,409,484
Number of Sequences: 37544
Number of extensions: 313097
Number of successful extensions: 1319
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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