Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26b14
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75713-8|CAB00056.1|  234|Caenorhabditis elegans Hypothetical pr...   353   8e-98
Z75713-9|CAB00053.1|  235|Caenorhabditis elegans Hypothetical pr...   352   1e-97
M73827-1|AAA27983.1|  234|Caenorhabditis elegans casein kinase I...   349   9e-97
Z70211-1|CAA94157.2|  299|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z83316-8|CAB54186.1|  409|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U14635-10|AAM81107.1|  552|Caenorhabditis elegans Abnormal dye f...    28   6.1  
U14635-9|AAK84493.1|  574|Caenorhabditis elegans Abnormal dye fi...    28   6.1  
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p...    28   8.1  
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu...    28   8.1  
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu...    28   8.1  
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.      28   8.1  

>Z75713-8|CAB00056.1|  234|Caenorhabditis elegans Hypothetical
           protein T01G9.6a protein.
          Length = 234

 Score =  353 bits (868), Expect = 8e-98
 Identities = 157/200 (78%), Positives = 176/200 (88%), Gaps = 4/200 (2%)
 Frame = +3

Query: 144 MSSSEEVSWIAWFCTLRGNEFFCEVDEDYINDKFNLTGLNEQVPHYREALDMILDLEPD- 320
           MSSSEEVSWI WFC LRGNEFFCEVDE+YI D+FNLTGLNEQVP YR+ALDMILDLEPD 
Sbjct: 1   MSSSEEVSWITWFCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPDD 60

Query: 321 ---NPNESDLVEQASEILYGLIHARYILTNRGISQMLDKFQSGDFGYCPRVYCECQPMLP 491
              N   +DLVEQA+E+LYGLIHARYILTNRGISQM++K++  DFG CPRVYCE QPMLP
Sbjct: 61  IEDNATNTDLVEQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGVCPRVYCENQPMLP 120

Query: 492 IGLSDVPAEAMVKLYCPRCMDVYTPKSSRHHHTDGAYFGTGFPHMVFMVHPDKRPKRPAS 671
           IGLSDVP EAMVKLYCPRC DV+ P+SSRH HTDG+YFGTGFPHM+F VHPD RP+RP +
Sbjct: 121 IGLSDVPGEAMVKLYCPRCNDVFVPRSSRHQHTDGSYFGTGFPHMLFFVHPDLRPRRPVT 180

Query: 672 QFVPRLYGFKIHPLAYQIQQ 731
           QFVP+LYGFKIHP+AY  Q+
Sbjct: 181 QFVPKLYGFKIHPVAYGGQE 200


>Z75713-9|CAB00053.1|  235|Caenorhabditis elegans Hypothetical
           protein T01G9.6b protein.
          Length = 235

 Score =  352 bits (866), Expect = 1e-97
 Identities = 157/201 (78%), Positives = 176/201 (87%), Gaps = 5/201 (2%)
 Frame = +3

Query: 144 MSSSEEVSWIAWFCTLRGNEFFCEVDEDYINDKFNLTGLNEQVPHYREALDMILDLEP-- 317
           MSSSEEVSWI WFC LRGNEFFCEVDE+YI D+FNLTGLNEQVP YR+ALDMILDLEP  
Sbjct: 1   MSSSEEVSWITWFCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPED 60

Query: 318 ---DNPNESDLVEQASEILYGLIHARYILTNRGISQMLDKFQSGDFGYCPRVYCECQPML 488
              DN   +DLVEQA+E+LYGLIHARYILTNRGISQM++K++  DFG CPRVYCE QPML
Sbjct: 61  DIEDNATNTDLVEQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGVCPRVYCENQPML 120

Query: 489 PIGLSDVPAEAMVKLYCPRCMDVYTPKSSRHHHTDGAYFGTGFPHMVFMVHPDKRPKRPA 668
           PIGLSDVP EAMVKLYCPRC DV+ P+SSRH HTDG+YFGTGFPHM+F VHPD RP+RP 
Sbjct: 121 PIGLSDVPGEAMVKLYCPRCNDVFVPRSSRHQHTDGSYFGTGFPHMLFFVHPDLRPRRPV 180

Query: 669 SQFVPRLYGFKIHPLAYQIQQ 731
           +QFVP+LYGFKIHP+AY  Q+
Sbjct: 181 TQFVPKLYGFKIHPVAYGGQE 201


>M73827-1|AAA27983.1|  234|Caenorhabditis elegans casein kinase II
           beta subunit protein.
          Length = 234

 Score =  349 bits (859), Expect = 9e-97
 Identities = 156/200 (78%), Positives = 175/200 (87%), Gaps = 4/200 (2%)
 Frame = +3

Query: 144 MSSSEEVSWIAWFCTLRGNEFFCEVDEDYINDKFNLTGLNEQVPHYREALDMILDLEPD- 320
           MSSSEEVSWI WFC LRGNEFFCEVDE+YI D+FNLTGLNEQVP YR+ALDMILDLEPD 
Sbjct: 1   MSSSEEVSWITWFCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPDD 60

Query: 321 ---NPNESDLVEQASEILYGLIHARYILTNRGISQMLDKFQSGDFGYCPRVYCECQPMLP 491
              N   +DLVEQA+E+LYGLIHARYILTNRGISQM++K++  DFG CPRVYCE QPMLP
Sbjct: 61  IEDNATNTDLVEQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGVCPRVYCENQPMLP 120

Query: 492 IGLSDVPAEAMVKLYCPRCMDVYTPKSSRHHHTDGAYFGTGFPHMVFMVHPDKRPKRPAS 671
           IGLSDVP EAMVKLYCPRC  V+ P+SSRH HTDG+YFGTGFPHM+F VHPD RP+RP +
Sbjct: 121 IGLSDVPGEAMVKLYCPRCNMVFVPRSSRHQHTDGSYFGTGFPHMLFFVHPDLRPRRPVT 180

Query: 672 QFVPRLYGFKIHPLAYQIQQ 731
           QFVP+LYGFKIHP+AY  Q+
Sbjct: 181 QFVPKLYGFKIHPVAYGGQE 200


>Z70211-1|CAA94157.2|  299|Caenorhabditis elegans Hypothetical
           protein K11E4.1 protein.
          Length = 299

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 153 SEEVSWIAWFCTLRGNEFFCEVDEDYINDKFNLTGLNEQVPHY 281
           +E++ +  +     GNE F    +  + DKFN+   N+Q+P +
Sbjct: 176 AEQMFYFGYGSPRCGNEDFAYYVDSSLADKFNIVWFNDQIPEF 218


>Z83316-8|CAB54186.1|  409|Caenorhabditis elegans Hypothetical
           protein B0379.7 protein.
          Length = 409

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 357 PMLVPPDQIHLDCLAPDPESCPAPL 283
           P   PP Q+     AP PES PAP+
Sbjct: 56  PAAAPPQQLEQPTPAPAPESAPAPV 80


>U14635-10|AAM81107.1|  552|Caenorhabditis elegans Abnormal dye
           filling protein 13,isoform b protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 225 DYINDKFNLTGLNEQVPHYREALDMILDLEPDNPN 329
           D + D+ +L G+N    HY++A+++   +   +PN
Sbjct: 127 DTLEDRLSLAGVNYSRMHYQDAIEVYTSVLQTSPN 161


>U14635-9|AAK84493.1|  574|Caenorhabditis elegans Abnormal dye
           filling protein 13,isoform a protein.
          Length = 574

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 225 DYINDKFNLTGLNEQVPHYREALDMILDLEPDNPN 329
           D + D+ +L G+N    HY++A+++   +   +PN
Sbjct: 149 DTLEDRLSLAGVNYSRMHYQDAIEVYTSVLQTSPN 183


>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
           protein F02E9.4b protein.
          Length = 1507

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 261 NEQVPHYREALDMILDLEPDNPNESDLVEQASEILY 368
           +  VP Y   L+++ D         D++EQ +E+LY
Sbjct: 301 SSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLY 336


>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
           protein F02E9.4a protein.
          Length = 1505

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 261 NEQVPHYREALDMILDLEPDNPNESDLVEQASEILY 368
           +  VP Y   L+++ D         D++EQ +E+LY
Sbjct: 301 SSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLY 336


>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
           guidance protein 3,isoform b protein.
          Length = 1273

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = -1

Query: 552 PCSAGSTASPS---LRRGRPTNQLAA*VGIHS---IHVGNIQNPQTGTY 424
           PC A    +P    LR G P +   + +  HS   +H+ +++ P TG Y
Sbjct: 445 PCQASGKPTPGISWLRDGLPIDITDSRISQHSTGSLHIADLKKPDTGVY 493


>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
           guidance protein 3,isoform a protein.
          Length = 1269

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = -1

Query: 552 PCSAGSTASPS---LRRGRPTNQLAA*VGIHS---IHVGNIQNPQTGTY 424
           PC A    +P    LR G P +   + +  HS   +H+ +++ P TG Y
Sbjct: 445 PCQASGKPTPGISWLRDGLPIDITDSRISQHSTGSLHIADLKKPDTGVY 493


>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
          Length = 1273

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = -1

Query: 552 PCSAGSTASPS---LRRGRPTNQLAA*VGIHS---IHVGNIQNPQTGTY 424
           PC A    +P    LR G P +   + +  HS   +H+ +++ P TG Y
Sbjct: 445 PCQASGKPTPGISWLRDGLPIDITDSRISQHSTGSLHIADLKKPDTGVY 493


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,496,523
Number of Sequences: 27780
Number of extensions: 420963
Number of successful extensions: 1142
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)