Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26b07
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.32 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   3.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   3.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 379 CCSYIFFCFNTLIAFCLTEF 320
           CC++IFF  + L   CL  F
Sbjct: 183 CCAFIFFNMHLLFLLCLDYF 202


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -3

Query: 630 HHHQSLAYHIACRGLLELHQLVPSYQLTHHLHH 532
           HH QS A   A R       + P     HH HH
Sbjct: 25  HHEQSAAAAAAYRSFPLSLGMSPYASSQHHHHH 57



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = -3

Query: 630 HHHQSLAYHIACRGLLELHQLVPSYQLTHHLHH 532
           HHH+  A   A      L   +  Y  + H HH
Sbjct: 24  HHHEQSAAAAAAYRSFPLSLGMSPYASSQHHHH 56


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 636 QAHHHQSLAYHIACRGLLELHQLVPSYQLTHH 541
           Q HHH +  +HI  +  +  H +  +  L HH
Sbjct: 320 QNHHHHA-GHHIHAQHHVVNHHVAANGSLKHH 350


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 253 WTFCSILSARPSTFLM 206
           WTFC ++ A  +T+L+
Sbjct: 352 WTFCHMMIAALTTYLV 367


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 388 LSSCCSYIFFCFNTL 344
           L SCCS IF C   L
Sbjct: 98  LLSCCSVIFGCIFAL 112


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 388 LSSCCSYIFFCFNTL 344
           L SCCS IF C   L
Sbjct: 98  LLSCCSVIFGCIFAL 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,216
Number of Sequences: 336
Number of extensions: 3092
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)