Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26b07
(674 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 27 0.22
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.66
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.7
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 8.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.1
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 26.6 bits (56), Expect = 0.22
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -3
Query: 576 HQLVPSYQLTHHLHHQWNQY*SS*ILFSFVLHHPSLQILWYECPSMSALHNL 421
H+ +P YQ HHLHH Y S L + +P + + E P+ L L
Sbjct: 64 HRDLPIYQSHHHLHHHQVLYQQSPYL---MYENPDEEKRYQEHPNGKILREL 112
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.0 bits (52), Expect = 0.66
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 672 K*ETYQEHQVLQQAHHH-QSLA 610
K ET Q H LQ HHH QS A
Sbjct: 134 KQETLQRHHHLQNHHHHLQSTA 155
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.7
Identities = 18/74 (24%), Positives = 29/74 (39%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQS 404
R+ EQK+ K E RKY+ + SK R + K +++ + +
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYN--YNNN 97
Query: 405 FNMEQANYATQTLK 446
+N NY T K
Sbjct: 98 YNNYNNNYNTNYKK 111
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK K + E RKY+ + SK R + + K +++
Sbjct: 274 RSREREQKSYKNEREYRKYR-ETSKERFRDRRERERSKESKII 315
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -2
Query: 376 CSYIFFCFNTLIAFCLT 326
C FFC N + ++C T
Sbjct: 284 CWVPFFCVNIVTSYCKT 300
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 82
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.1
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQS 404
R+ EQK K + E RKY RE + S + K+ K+ ++ + +
Sbjct: 41 RSREREQKSYKNEREYRKY-------RETSKERSQDRTERETSKEPKIISSLSNNYKYSN 93
Query: 405 FNMEQANY 428
+N NY
Sbjct: 94 YNNYNNNY 101
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.1
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQS 404
R+ EQK K + E RKY RE + S + K+ K+ ++ + +
Sbjct: 41 RSREREQKSYKNEREYRKY-------RETSKERSQDRTERETSKEPKIISSLSNNYKYSN 93
Query: 405 FNMEQANY 428
+N NY
Sbjct: 94 YNNYNNNY 101
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 82
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 82
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 82
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 82
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 82
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 82
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 82
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 82
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 490 CVTPSFIAD 464
CV PSF+AD
Sbjct: 124 CVVPSFVAD 132
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 274 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 315
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 225 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 353
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 274 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 315
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -3
Query: 114 RNFSEPILINLQILLAFLN 58
+NF++P+L+N Q+ +L+
Sbjct: 1032 KNFNQPLLVNDQLGQLYLD 1050
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,165
Number of Sequences: 438
Number of extensions: 3198
Number of successful extensions: 25
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -