Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26b02
         (311 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC094822-1|AAH94822.1|  330|Homo sapiens THAP4 protein protein.        35   0.058
BC071896-1|AAH71896.1|  330|Homo sapiens THAP4 protein protein.        35   0.058
BC069235-1|AAH69235.1|  577|Homo sapiens THAP domain containing ...    35   0.058
BC009439-1|AAH09439.1|  252|Homo sapiens THAP4 protein protein.        35   0.058
BC000247-1|AAH00247.1|  252|Homo sapiens THAP4 protein protein.        35   0.058
AK001216-1|BAA91560.1|  252|Homo sapiens protein ( Homo sapiens ...    35   0.058
AF258556-1|AAG23759.1|  577|Homo sapiens PP238 protein.                35   0.058
AF132970-1|AAD27745.1|  165|Homo sapiens CGI-36 protein protein.       35   0.058
AC133528-4|AAY14918.1|  577|Homo sapiens unknown protein.              35   0.058
BC001842-1|AAH01842.1|  169|Homo sapiens THAP4 protein protein.        33   0.13 
BC000767-1|AAH00767.1|  169|Homo sapiens THAP4 protein protein.        33   0.13 

>BC094822-1|AAH94822.1|  330|Homo sapiens THAP4 protein protein.
          Length = 330

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 174 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 263
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 235 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 264



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 178 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 235


>BC071896-1|AAH71896.1|  330|Homo sapiens THAP4 protein protein.
          Length = 330

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 174 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 263
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 235 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 264



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 178 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 235


>BC069235-1|AAH69235.1|  577|Homo sapiens THAP domain containing 4
           protein.
          Length = 577

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 174 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 263
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 482 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 511



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 425 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 482


>BC009439-1|AAH09439.1|  252|Homo sapiens THAP4 protein protein.
          Length = 252

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 174 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 263
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 157 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 186



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 100 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 157


>BC000247-1|AAH00247.1|  252|Homo sapiens THAP4 protein protein.
          Length = 252

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 174 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 263
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 157 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 186



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 100 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 157


>AK001216-1|BAA91560.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10354 fis, clone NT2RM2001194. ).
          Length = 252

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 174 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 263
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 157 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 186



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 100 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 157


>AF258556-1|AAG23759.1|  577|Homo sapiens PP238 protein.
          Length = 577

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 174 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 263
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 482 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 511



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 425 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 482


>AF132970-1|AAD27745.1|  165|Homo sapiens CGI-36 protein protein.
          Length = 165

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 174 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 263
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 70  ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 99



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 13  LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 70


>AC133528-4|AAY14918.1|  577|Homo sapiens unknown protein.
          Length = 577

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 174 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 263
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 482 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 511



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 425 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 482


>BC001842-1|AAH01842.1|  169|Homo sapiens THAP4 protein protein.
          Length = 169

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 100 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 157


>BC000767-1|AAH00767.1|  169|Homo sapiens THAP4 protein protein.
          Length = 169

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 177
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 100 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,766,161
Number of Sequences: 237096
Number of extensions: 910988
Number of successful extensions: 1926
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1926
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)