Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26b02
         (311 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047527-1|AAK77259.1| 1013|Drosophila melanogaster GH03311p pro...    27   6.5  
AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4 p...    27   6.5  
AJ238707-1|CAB42051.1|  462|Drosophila melanogaster MSTA protein...    27   6.5  
AE014298-362|AAN09072.1|  462|Drosophila melanogaster CG33548-PA...    27   6.5  
AE013599-3888|AAM68317.1| 1013|Drosophila melanogaster CG4589-PC...    27   6.5  
AE013599-3887|AAF47217.1| 1013|Drosophila melanogaster CG4589-PB...    27   6.5  
AE013599-3886|AAM68316.1| 1013|Drosophila melanogaster CG4589-PA...    27   6.5  

>AY047527-1|AAK77259.1| 1013|Drosophila melanogaster GH03311p
           protein.
          Length = 1013

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 72  LQLS*RLGVYMRWSPHAQFPID 137
           L+LS  LG Y R+ PHA +  D
Sbjct: 58  LELSRSLGTYRRFQPHANYGYD 79


>AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4
           protein.
          Length = 991

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 54  ISSCICCRPTAFQTG 10
           +SSCICC  T  QTG
Sbjct: 627 LSSCICCHETLPQTG 641


>AJ238707-1|CAB42051.1|  462|Drosophila melanogaster MSTA protein
           protein.
          Length = 462

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 54  ISSCICCRPTAFQTG 10
           +SSCICC  T  QTG
Sbjct: 98  LSSCICCHETLPQTG 112


>AE014298-362|AAN09072.1|  462|Drosophila melanogaster CG33548-PA,
           isoform A protein.
          Length = 462

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 54  ISSCICCRPTAFQTG 10
           +SSCICC  T  QTG
Sbjct: 98  LSSCICCHETLPQTG 112


>AE013599-3888|AAM68317.1| 1013|Drosophila melanogaster CG4589-PC,
           isoform C protein.
          Length = 1013

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 72  LQLS*RLGVYMRWSPHAQFPID 137
           L+LS  LG Y R+ PHA +  D
Sbjct: 58  LELSRSLGTYRRFQPHANYGYD 79


>AE013599-3887|AAF47217.1| 1013|Drosophila melanogaster CG4589-PB,
           isoform B protein.
          Length = 1013

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 72  LQLS*RLGVYMRWSPHAQFPID 137
           L+LS  LG Y R+ PHA +  D
Sbjct: 58  LELSRSLGTYRRFQPHANYGYD 79


>AE013599-3886|AAM68316.1| 1013|Drosophila melanogaster CG4589-PA,
           isoform A protein.
          Length = 1013

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 72  LQLS*RLGVYMRWSPHAQFPID 137
           L+LS  LG Y R+ PHA +  D
Sbjct: 58  LELSRSLGTYRRFQPHANYGYD 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,828,037
Number of Sequences: 53049
Number of extensions: 290598
Number of successful extensions: 696
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 610819518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)