Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26a19
         (596 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-11|CAB70104.2|  927|Caenorhabditis elegans Hypothetical...    40   0.001
Z80344-3|CAB02488.2|  491|Caenorhabditis elegans Hypothetical pr...    33   0.15 
Z36238-6|CAA85279.2|  337|Caenorhabditis elegans Hypothetical pr...    32   0.27 
Z93382-7|CAB07618.1|  214|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z81487-6|CAB03996.2|  872|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z50071-7|CAA90405.3|  356|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z50071-6|CAL64000.2|  372|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z50071-5|CAH04718.2|  396|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF078792-4|AAN84813.1|  261|Caenorhabditis elegans Hypothetical ...    28   5.8  
AF078792-3|AAC26945.2|  635|Caenorhabditis elegans Hypothetical ...    28   5.8  
AC006832-4|AAF39996.1|  485|Caenorhabditis elegans Hypothetical ...    28   5.8  
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AL132949-11|CAB70104.2|  927|Caenorhabditis elegans Hypothetical
           protein Y53F4B.13 protein.
          Length = 927

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
 Frame = +1

Query: 328 FLDLCGGPGEFANYTMSLNPL--CKAYGVTLT-NNSVCVYKPTVCKRKNFTTITGPDKSG 498
           F D+C GPG F+ Y +        K +G TL   +   ++K T   +  F T  G   +G
Sbjct: 290 FADVCAGPGGFSEYMLWRKGFYNAKGFGFTLAGKDDFKLFKFTASSQYFFETFYGTKDNG 349

Query: 499 DVFDK-NV-VFEISIKCGNA---CDLVLADGSVDVNG 594
           DV D  N+   E  I  G +     L++ADG   V G
Sbjct: 350 DVMDPVNIDSLEAHISRGTSGLGVHLMMADGGFSVEG 386


>Z80344-3|CAB02488.2|  491|Caenorhabditis elegans Hypothetical
           protein F15D4.5 protein.
          Length = 491

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 10/96 (10%)
 Frame = +1

Query: 256 RRPRCW---RKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNN- 423
           RR   W   R+ L   KK H C  V   ++ CG      N  M  N  CK Y  TL  N 
Sbjct: 387 RRVSTWFDRREKLTEQKKCHQCLEVYETVEFCGTRDNHTNCPME-NTFCK-YCKTLKGNQ 444

Query: 424 ----SVCVYKPTVCKR--KNFTTITGPDKSGDVFDK 513
                   + P VC+   K   T   P K G +  K
Sbjct: 445 PGWKEAAAHHPAVCEHAPKEHNTHEPPMKKGRIMSK 480


>Z36238-6|CAA85279.2|  337|Caenorhabditis elegans Hypothetical
           protein R74.7 protein.
          Length = 337

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 28/112 (25%), Positives = 46/112 (41%)
 Frame = +1

Query: 259 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 438
           R R   KL++ID +F + + V   +DLC  PG ++          + Y        V + 
Sbjct: 22  RARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLSK-----RLYEEDQEAKIVAID 76

Query: 439 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNG 594
              +        + G   S D  ++ V+   S   G   D+V+ DG+ DV G
Sbjct: 77  LQPMAPIPGVIQLQGDITSVDTANQ-VIKHFS---GEKSDIVICDGAPDVTG 124


>Z93382-7|CAB07618.1|  214|Caenorhabditis elegans Hypothetical
           protein F45G2.9 protein.
          Length = 214

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +1

Query: 259 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTN 420
           R R   KL+EI++KF   +   T +D+   PG +    +   P   A GV L N
Sbjct: 33  RARSAFKLIEINEKFKFLKPESTVIDIGCAPGSWLQVVVQKCPNGYASGVDLQN 86


>Z81487-6|CAB03996.2|  872|Caenorhabditis elegans Hypothetical
           protein C54E10.1 protein.
          Length = 872

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +1

Query: 226 RSKLFDKRPTRRPRCWRKLLEIDK--KFHVCRHV 321
           R K+F KRP R   C  KLLE+ K  K H+ R +
Sbjct: 477 RFKIFIKRPERGDVCASKLLEVMKMEKLHILRSI 510


>Z50071-7|CAA90405.3|  356|Caenorhabditis elegans Hypothetical
           protein T07D4.2a protein.
          Length = 356

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 340 CGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVYKPTVCKRK 462
           CG P E  N+   L  L  +Y V +  N  C +  T  K K
Sbjct: 128 CGLPNEVHNFNKLLGKLKYSYKVVIGGNHECTFDDTFLKLK 168


>Z50071-6|CAL64000.2|  372|Caenorhabditis elegans Hypothetical
           protein T07D4.2c protein.
          Length = 372

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 340 CGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVYKPTVCKRK 462
           CG P E  N+   L  L  +Y V +  N  C +  T  K K
Sbjct: 144 CGLPNEVHNFNKLLGKLKYSYKVVIGGNHECTFDDTFLKLK 184


>Z50071-5|CAH04718.2|  396|Caenorhabditis elegans Hypothetical
           protein T07D4.2b protein.
          Length = 396

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 340 CGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVYKPTVCKRK 462
           CG P E  N+   L  L  +Y V +  N  C +  T  K K
Sbjct: 168 CGLPNEVHNFNKLLGKLKYSYKVVIGGNHECTFDDTFLKLK 208


>AF078792-4|AAN84813.1|  261|Caenorhabditis elegans Hypothetical
           protein Y40D12A.1b protein.
          Length = 261

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 481 GPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNG 594
           GP   GD+      + I  K     DLV ADGS +  G
Sbjct: 191 GPSDDGDIEKFTEEYLIKQKLAGTFDLVTADGSTNTQG 228


>AF078792-3|AAC26945.2|  635|Caenorhabditis elegans Hypothetical
           protein Y40D12A.1a protein.
          Length = 635

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 481 GPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNG 594
           GP   GD+      + I  K     DLV ADGS +  G
Sbjct: 191 GPSDDGDIEKFTEEYLIKQKLAGTFDLVTADGSTNTQG 228


>AC006832-4|AAF39996.1|  485|Caenorhabditis elegans Hypothetical
           protein ZK355.4 protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 346 GPGEFANYTMSLNPLCKAYGVTLTNNSV 429
           G   F N +M +   C+ YG+++TNNS+
Sbjct: 108 GSLSFFNISMHMYFYCETYGLSITNNSL 135


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 376 SLNPLCKAYGVTLTNNSVCVYKPTVCKRKNFT 471
           S +PLC   GVT TN   C  +  +C+  N T
Sbjct: 775 SYDPLCGTNGVTFTN--ACSLQKEICESANST 804


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,978,296
Number of Sequences: 27780
Number of extensions: 295513
Number of successful extensions: 840
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)