Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26a10
(629 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 0.46
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 0.46
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 0.46
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 0.46
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.61
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.61
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.61
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 1.9
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 1.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.4
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 4.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 9.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 9.9
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 9.9
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 21 9.9
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.46
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 236 NTHSFKYRYVHNDTNAKFYNXIDFCKGLEI 325
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.46
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 236 NTHSFKYRYVHNDTNAKFYNXIDFCKGLEI 325
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.46
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 236 NTHSFKYRYVHNDTNAKFYNXIDFCKGLEI 325
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.46
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 236 NTHSFKYRYVHNDTNAKFYNXIDFCKGLEI 325
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.0 bits (52), Expect = 0.61
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -2
Query: 430 QRVEIAFGFLLVKNNFV*MVNLIAVPIAIKYVVVRNFKTFAKIYXIVEFCVRVVV 266
++V ++ L+ + F +V I P ++ ++ + FA I + CV VVV
Sbjct: 274 EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVV 328
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.0 bits (52), Expect = 0.61
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -2
Query: 430 QRVEIAFGFLLVKNNFV*MVNLIAVPIAIKYVVVRNFKTFAKIYXIVEFCVRVVV 266
++V ++ L+ + F +V I P ++ ++ + FA I + CV VVV
Sbjct: 274 EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVV 328
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.0 bits (52), Expect = 0.61
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -1
Query: 326 QFQDLCKNLXHCRILRSCRCARICT*NCAC 237
+++ C L HC +C C C C C
Sbjct: 738 RYEAHCFALCHCCDFDACDCEMTCPAGCKC 767
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -2
Query: 430 QRVEIAFGFLLVKNNFV*MVNLIAVPIAIKYVVVRNFKTFAKIYXIVEFCVRVVV 266
++V ++ LL F ++ I P ++ ++ F F I CV VVV
Sbjct: 270 EKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVV 324
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 365 QVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHL 517
Q YH+ + F KQK ++ L + L LM F NKS ++ +
Sbjct: 9 QHYHITPV-FTKQKKVKEDTELNLQTIFNEDKLDNLMDKQFKNKSLPVIEI 58
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 236 NTHSFKYRYVHNDTNAKFYN 295
N +++KY Y +N+ N YN
Sbjct: 325 NNNNYKYNYNNNNYNNNNYN 344
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 4.3
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -2
Query: 421 EIAFGFLLVKNNFV*MVNLIAVPIAIKYVVVRNFKTFAKIYXIVEFCVRVVV 266
+I F L + VNLI ++I Y+ V F A + C+ +++
Sbjct: 224 DIFFNITLRRKTLFYTVNLIVPCVSISYLSVLAFYLPADSGEKIALCINILL 275
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.0 bits (42), Expect = 9.9
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = +2
Query: 155 FDPDDYKKYXINVQQWSHIVKWDSFKCNTHSFKYRYVHNDTN 280
FD D Y N Q H K D+ N H+ + + N
Sbjct: 417 FDNQDNNHYNHNHNQARHSSKSDNQNNNQHNDQAHHSSKSNN 458
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 236 NTHSFKYRYVHNDTNAKFYN 295
+ +++KY Y +N+ N YN
Sbjct: 90 HNNNYKYNYNNNNYNNNNYN 109
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 236 NTHSFKYRYVHNDTNAKFYN 295
+ +++KY Y +N+ N YN
Sbjct: 90 HNNNYKYNYNNNNYNNNNYN 109
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 580 KTEYKQRKIYGXPRNV 627
+ EYK K+YG +N+
Sbjct: 87 RQEYKNIKLYGLTKNL 102
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,590
Number of Sequences: 438
Number of extensions: 2539
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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