Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25p21
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical p... 40 0.001
Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical p... 40 0.001
Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical pr... 40 0.001
U49941-4|AAP46282.1| 271|Caenorhabditis elegans Hypothetical pr... 33 0.17
U49941-3|AAP46281.1| 451|Caenorhabditis elegans Hypothetical pr... 33 0.17
U49941-2|AAB53873.1| 757|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 28 4.8
U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical pr... 28 4.8
U67953-3|AAL13328.1| 321|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC006629-8|ABC48258.1| 312|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 303 FSVTVPDINPLKEKVFVTGNTPELGEWDYTKIIMMDYDEASNLWLKTLTIPNTCEVLYRY 482
F+V V +++ + V+V G+ LG W+ T+ + + D + K + + ++ +RY
Sbjct: 11 FAVDVENLHA-HQSVYVVGSNDVLGTWEATRAMPLVQDPDRFMRWKGSIVTDVHQLKFRY 69
Query: 483 AICF--LNENSNDVFIRKWETNIHPR 554
I + +++ + + KWE +HPR
Sbjct: 70 FIGYNLMSDQGERLIVDKWEAFLHPR 95
>Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 303 FSVTVPDINPLKEKVFVTGNTPELGEWDYTKIIMMDYDEASNLWLKTLTIPNTCEVLYRY 482
F+V V +++ + V+V G+ LG W+ T+ + + D + K + + ++ +RY
Sbjct: 88 FAVDVENLHA-HQSVYVVGSNDVLGTWEATRAMPLVQDPDRFMRWKGSIVTDVHQLKFRY 146
Query: 483 AICF--LNENSNDVFIRKWETNIHPR 554
I + +++ + + KWE +HPR
Sbjct: 147 FIGYNLMSDQGERLIVDKWEAFLHPR 172
>Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 303 FSVTVPDINPLKEKVFVTGNTPELGEWDYTKIIMMDYDEASNLWLKTLTIPNTCEVLYRY 482
F+V V +++ + V+V G+ LG W+ T+ + + D + K + + ++ +RY
Sbjct: 11 FAVDVENLHA-HQSVYVVGSNDVLGTWEATRAMPLVQDPDRFMRWKGSIVTDVHQLKFRY 69
Query: 483 AICF--LNENSNDVFIRKWETNIHPR 554
I + +++ + + KWE +HPR
Sbjct: 70 FIGYNLMSDQGERLIVDKWEAFLHPR 95
>Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 303 FSVTVPDINPLKEKVFVTGNTPELGEWDYTKIIMMDYDEASNLWLKTLTIPNTCEVLYRY 482
F+V V +++ + V+V G+ LG W+ T+ + + D + K + + ++ +RY
Sbjct: 88 FAVDVENLHA-HQSVYVVGSNDVLGTWEATRAMPLVQDPDRFMRWKGSIVTDVHQLKFRY 146
Query: 483 AICF--LNENSNDVFIRKWETNIHPR 554
I + +++ + + KWE +HPR
Sbjct: 147 FIGYNLMSDQGERLIVDKWEAFLHPR 172
>U49941-4|AAP46282.1| 271|Caenorhabditis elegans Hypothetical
protein K10B3.6c protein.
Length = 271
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +3
Query: 339 EKVFVTGNTPELGEWDYTKII-MMDYDEASNLWLKTLTIPNTC-EVLYRY-AICFLNENS 509
EK+ V G+ P LGEW+ K + + N + +++P++ E +RY + +L+ +
Sbjct: 113 EKIHVVGSLPVLGEWNPRKSFPLTKSTDEENTFHAIVSVPSSIKEFNFRYIRVMYLDPSE 172
Query: 510 ND-----VFIRKWET 539
N+ + + KWET
Sbjct: 173 NNTSEPIMVLSKWET 187
>U49941-3|AAP46281.1| 451|Caenorhabditis elegans Hypothetical
protein K10B3.6b protein.
Length = 451
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +3
Query: 339 EKVFVTGNTPELGEWDYTKII-MMDYDEASNLWLKTLTIPNTC-EVLYRY-AICFLNENS 509
EK+ V G+ P LGEW+ K + + N + +++P++ E +RY + +L+ +
Sbjct: 113 EKIHVVGSLPVLGEWNPRKSFPLTKSTDEENTFHAIVSVPSSIKEFNFRYIRVMYLDPSE 172
Query: 510 ND-----VFIRKWET 539
N+ + + KWET
Sbjct: 173 NNTSEPIMVLSKWET 187
>U49941-2|AAB53873.1| 757|Caenorhabditis elegans Hypothetical
protein K10B3.6a protein.
Length = 757
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +3
Query: 339 EKVFVTGNTPELGEWDYTKII-MMDYDEASNLWLKTLTIPNTC-EVLYRY-AICFLNENS 509
EK+ V G+ P LGEW+ K + + N + +++P++ E +RY + +L+ +
Sbjct: 113 EKIHVVGSLPVLGEWNPRKSFPLTKSTDEENTFHAIVSVPSSIKEFNFRYIRVMYLDPSE 172
Query: 510 ND-----VFIRKWET 539
N+ + + KWET
Sbjct: 173 NNTSEPIMVLSKWET 187
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = +3
Query: 372 LGEW-----DYTKIIMMDYDEASNLWLKTLTIPNTCEV 470
LG+W D +DYDEA+N WLK + PN ++
Sbjct: 196 LGKWVEAKTDLATACKLDYDEAANEWLKEVE-PNAHKI 232
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = +3
Query: 372 LGEW-----DYTKIIMMDYDEASNLWLKTLTIPNTCEV 470
LG+W D +DYDEA+N WLK + PN ++
Sbjct: 196 LGKWVEAKTDLATACKLDYDEAANEWLKEVE-PNAHKI 232
>U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical
protein C18F3.4 protein.
Length = 306
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 405 MDYDEASNLWLKTLTIP--NTCEVLYRYAICFLNENSNDVFIRKWETNIHPRMIKQTMLH 578
+D+D ++N W + L +P N E + Y N++ ++ W+ +IK + +
Sbjct: 166 VDFDLSNNEWHENLRLPNGNGTEKYHPYGGNSKNDSPLQTRMKGWQREYIKEVIKDSH-Y 224
Query: 579 PTQDVFGEYDKKQGIS 626
PT++ + ++K +S
Sbjct: 225 PTEEELRDIEQKCDLS 240
>U67953-3|AAL13328.1| 321|Caenorhabditis elegans Hypothetical
protein ZC13.2 protein.
Length = 321
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 271 CSGSGSDIFFSGLVFCIFLSSRKNQRCIILILPLFAICHCLFNTKVLF 128
C GS +FF + C L + I++++ LF I H T ++F
Sbjct: 180 CFWFGSGVFFIFTIRCEVLDTAIFNTTILILVVLFQIAHAGLVTSLIF 227
>AC006629-8|ABC48258.1| 312|Caenorhabditis elegans Hypothetical
protein F12E12.9 protein.
Length = 312
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 435 LKTLTIPNTCEVLYRYAICFLNENSNDVFIRKWETNIHPRM 557
L L + N+ ++ R AI L++N +VF++ W +PR+
Sbjct: 209 LNDLLLNNSSDIQIRKAI--LSDNDINVFLKSWMIGSNPRL 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,310,396
Number of Sequences: 27780
Number of extensions: 297766
Number of successful extensions: 738
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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