Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25p14
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006608-6|AAF39753.1|  308|Caenorhabditis elegans Steroid alpha...   167   7e-42
U80452-6|AAB37858.1|  592|Caenorhabditis elegans Hypothetical pr...    34   0.086
Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.     32   0.35 
Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical pr...    32   0.35 
Z98262-2|CAD44155.1|  484|Caenorhabditis elegans Hypothetical pr...    32   0.35 
Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical pr...    32   0.35 
Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical pr...    32   0.35 
Z71260-3|CAD44115.1|  484|Caenorhabditis elegans Hypothetical pr...    32   0.35 
Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical pr...    32   0.35 
U80452-8|AAB37855.1|  244|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81593-4|CAB04742.1|  334|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z81119-1|CAB03331.1|  363|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical p...    28   5.7  
Z71178-11|CAA94885.2|  309|Caenorhabditis elegans Hypothetical p...    28   5.7  
AL023828-29|CAA19454.2|  483|Caenorhabditis elegans Hypothetical...    28   7.5  
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AL590342-1|CAC35858.1|  479|Caenorhabditis elegans Hypothetical ...    27   9.9  
AL032622-3|CAB63400.1|  479|Caenorhabditis elegans Y66A7A.4 prot...    27   9.9  

>AC006608-6|AAF39753.1|  308|Caenorhabditis elegans Steroid alpha
           reductase familyprotein 1 protein.
          Length = 308

 Score =  167 bits (406), Expect = 7e-42
 Identities = 79/160 (49%), Positives = 106/160 (66%), Gaps = 3/160 (1%)
 Frame = +1

Query: 169 VTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSK-LFLKD 345
           ++G  +IK +K++I Q  K  L  +RQAL++E KGK L D+  L+ L +      L+++D
Sbjct: 23  ISGSETIKAIKKRIAQK-KLKLTEERQALRVEPKGKPLADDQKLSDLGLSSQKAVLYVRD 81

Query: 346 LGPQVSWRNVFLAEYAGPLFVYLWVYQRPWILYGTQT--SSPEQVATVAAICWSAHYAKR 519
           LGPQ++W+ VF+AEYAGPLFVY   Y RP  +YG     ++      +A   WS HYAKR
Sbjct: 82  LGPQIAWKTVFMAEYAGPLFVYPLFYLRPTFIYGQAAVNATMHPAVQIAFFAWSFHYAKR 141

Query: 520 LFETLFIHRFSHGTMPLKNLFRNCAYYWLFALYVAYHVNH 639
           LFET FIHRF + TMP  NL +NC+YYW FA +VAY VNH
Sbjct: 142 LFETQFIHRFGNSTMPQFNLVKNCSYYWGFAAFVAYFVNH 181


>U80452-6|AAB37858.1|  592|Caenorhabditis elegans Hypothetical
           protein C16C8.16 protein.
          Length = 592

 Score = 34.3 bits (75), Expect = 0.086
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = +1

Query: 160 KIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 339
           K+ V G  +I+++K +I    K  +   R  L+    GK L+D  +L   NIQ+G+ ++L
Sbjct: 209 KLRVCGSDTIRHIKLRINSLAKVDISSFRMVLR----GKLLEDHHSLAYYNIQEGALIWL 264


>Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.
          Length = 292

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +1

Query: 118 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 291
           E  ++ V    P  K  + +  ++S+  +K+K+   V  +   +++ + +   GK LKDE
Sbjct: 4   ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60

Query: 292 DTLNSLNIQDGSKLFL 339
           +TL    I DG  + L
Sbjct: 61  ETLTQHKIADGHTVHL 76


>Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +1

Query: 118 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 291
           E  ++ V    P  K  + +  ++S+  +K+K+   V  +   +++ + +   GK LKDE
Sbjct: 4   ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60

Query: 292 DTLNSLNIQDGSKLFL 339
           +TL    I DG  + L
Sbjct: 61  ETLTQHKIADGHTVHL 76


>Z98262-2|CAD44155.1|  484|Caenorhabditis elegans Hypothetical
           protein F15C11.2b protein.
          Length = 484

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +1

Query: 118 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 291
           E  ++ V    P  K  + +  ++S+  +K+K+   V  +   +++ + +   GK LKDE
Sbjct: 4   ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60

Query: 292 DTLNSLNIQDGSKLFL 339
           +TL    I DG  + L
Sbjct: 61  ETLTQHKIADGHTVHL 76


>Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +1

Query: 118 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 291
           E  ++ V    P  K  + +  ++S+  +K+K+   V  +   +++ + +   GK LKDE
Sbjct: 4   ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60

Query: 292 DTLNSLNIQDGSKLFL 339
           +TL    I DG  + L
Sbjct: 61  ETLTQHKIADGHTVHL 76


>Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +1

Query: 118 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 291
           E  ++ V    P  K  + +  ++S+  +K+K+   V  +   +++ + +   GK LKDE
Sbjct: 4   ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60

Query: 292 DTLNSLNIQDGSKLFL 339
           +TL    I DG  + L
Sbjct: 61  ETLTQHKIADGHTVHL 76


>Z71260-3|CAD44115.1|  484|Caenorhabditis elegans Hypothetical
           protein F15C11.2b protein.
          Length = 484

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +1

Query: 118 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 291
           E  ++ V    P  K  + +  ++S+  +K+K+   V  +   +++ + +   GK LKDE
Sbjct: 4   ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60

Query: 292 DTLNSLNIQDGSKLFL 339
           +TL    I DG  + L
Sbjct: 61  ETLTQHKIADGHTVHL 76


>Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +1

Query: 118 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 291
           E  ++ V    P  K  + +  ++S+  +K+K+   V  +   +++ + +   GK LKDE
Sbjct: 4   ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60

Query: 292 DTLNSLNIQDGSKLFL 339
           +TL    I DG  + L
Sbjct: 61  ETLTQHKIADGHTVHL 76


>U80452-8|AAB37855.1|  244|Caenorhabditis elegans Hypothetical
           protein C16C8.13 protein.
          Length = 244

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 169 VTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 339
           V G  +I+ VK  I       +   R  L+     K L+D+ TL   NIQ+GS L L
Sbjct: 189 VRGSDTIRQVKLTINSLANVDISSFRMVLR----DKVLEDDHTLAYYNIQEGSTLGL 241


>Z81593-4|CAB04742.1|  334|Caenorhabditis elegans Hypothetical
           protein T20B3.4 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 590 VHIIGCLPSMWLIM*TIPYTLLPCTTCYYIGL 685
           +H+  CL  + + + TIPY L P    Y +GL
Sbjct: 58  LHLFSCLFDLGVSLFTIPYILFPVLAGYPLGL 89


>Z81119-1|CAB03331.1|  363|Caenorhabditis elegans Hypothetical
           protein T10H4.2 protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -3

Query: 249 LTIWV*RF--LHALLDFFFYILYRTFTCNVNLAERFRARYAQNFNLHIV 109
           +TIW   +  + +LL   F+  Y + T  + L +RF  RY   + L+I+
Sbjct: 95  VTIWCSFYAMMLSLLSIHFFYRYTSVTAPILLMKRFSCRYIFKYTLYIL 143


>Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical
           protein B0024.13b protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +1

Query: 481 VAAICWSAHYAKRLFETLFIHRFSHGTMPLKNLFRNCAYYWLFALYV 621
           +A +  S H A+RL+ET+F+  +S   M L +      +Y +  + +
Sbjct: 157 LALLLISLHVARRLYETIFVSVYSDSRMNLFHYAVGIVHYIILPISI 203


>Z71178-11|CAA94885.2|  309|Caenorhabditis elegans Hypothetical
           protein B0024.13a protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +1

Query: 481 VAAICWSAHYAKRLFETLFIHRFSHGTMPLKNLFRNCAYYWLFALYV 621
           +A +  S H A+RL+ET+F+  +S   M L +      +Y +  + +
Sbjct: 124 LALLLISLHVARRLYETIFVSVYSDSRMNLFHYAVGIVHYIILPISI 170


>AL023828-29|CAA19454.2|  483|Caenorhabditis elegans Hypothetical
           protein Y17G7B.9 protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
 Frame = +1

Query: 169 VTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE------DTLNSLN--IQDG 324
           V  ESSI +++EK+ +  +K    ++   + E   K ++DE      +T++ +N  ++D 
Sbjct: 263 VKDESSISSIREKLMKKSQKRKLEEKAGGEDEDYEKMIEDERNAKERETIDKMNSELKDM 322

Query: 325 SKLFLKDLGP 354
            K ++K L P
Sbjct: 323 QKEYMKALRP 332


>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
           protein ZK593.5 protein.
          Length = 1326

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = -1

Query: 401 SGPAYSAKNTFRQDT*GPRSFKKSLDP--S*ILREFRVSSSFNVLPLASSLRA 249
           S  A S K T RQ   GPRS  K  DP  S ++REF   S  +V    +S  A
Sbjct: 111 SPAASSEKLTGRQTGMGPRSMSKLADPNESRMVREFSNLSQSSVASSRASASA 163


>AL590342-1|CAC35858.1|  479|Caenorhabditis elegans Hypothetical
           protein Y66A7A.4 protein.
          Length = 479

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = +3

Query: 504 TLCQKVV*NFVHSSLFTWYDAIEELVQKLCILLVVCP 614
           +LC ++  N + ++ F++  +  ++V +L  L+ VCP
Sbjct: 36  SLCYRIYGNMLDNTEFSFVVSFPQIVSQLSFLMSVCP 72


>AL032622-3|CAB63400.1|  479|Caenorhabditis elegans Y66A7A.4
           protein.
          Length = 479

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = +3

Query: 504 TLCQKVV*NFVHSSLFTWYDAIEELVQKLCILLVVCP 614
           +LC ++  N + ++ F++  +  ++V +L  L+ VCP
Sbjct: 36  SLCYRIYGNMLDNTEFSFVVSFPQIVSQLSFLMSVCP 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,047,422
Number of Sequences: 27780
Number of extensions: 344118
Number of successful extensions: 903
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)