Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25p13
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 29 0.77
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.77
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 28 1.4
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 27 2.4
SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr 2|||M... 27 3.1
SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr 1|... 26 4.1
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 26 4.1
SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 26 5.5
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 7.2
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 7.2
SPAC12B10.16c |mug157||conserved protein |Schizosaccharomyces po... 25 7.2
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 9.5
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 28.7 bits (61), Expect = 0.77
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 279 APRPHYPSTGPAPRPHYARPLRQPWDGSQR 190
+P P PS GPAP A P R P QR
Sbjct: 183 SPNPSTPSNGPAPVSTTATPSRNPVTRLQR 212
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 0.77
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 313 MSAAGSDNNPARPTPALP*HWTRPTPALRQASATTLGWQPTTP 185
+S++ + +NP P PA+P P L AS T+ PT P
Sbjct: 379 LSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 27.9 bits (59), Expect = 1.4
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 7/57 (12%)
Frame = +3
Query: 396 SGFPAPAPRAHPALSPTERSPAKAG-------LHVNFSDKGEVKERREKFLTAKYGS 545
S P P PR S R P K L NF DKG V ++R T K S
Sbjct: 511 SASPPPVPRLSITRSQVSREPEKPEEIPSVPPLPSNFKDKGHVPQQRSVSYTPKRSS 567
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Frame = +3
Query: 405 PAPAPRAHPALSPTERSPAKAGLHVNFSD-KGEVKERREKFLTAK----YGSHQMALIRK 569
P+ R+ P + + N S +G K++ K L K YG+H +L +
Sbjct: 56 PSKPIRSQPLTPSSSKGAGNEPKSQNSSTTRGSAKKQSSKGLEEKLINSYGTHVESLNKG 115
Query: 570 RLAVEMWLYDE 602
R +E+W Y E
Sbjct: 116 RRLIEIWKYYE 126
>SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 685
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 515 REVPNGEVWQPSDGTDTQA 571
R +PN W+P+DG +T A
Sbjct: 494 RAMPNINCWRPADGNETSA 512
>SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 623
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 21 NNRVTRSSYYNEELNCHNFNFINFCDLALFIYVHTR 128
NN V N +LNC F + D A IY HTR
Sbjct: 343 NNTVLLGHSLNSDLNCLKFTHPHIIDTA-NIYNHTR 377
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 270 PHYPSTGPAPRPHYARPLRQPWDGSQRHHCDSITSELQKMFQRLDQ 133
P STGP PRP + L + ++R D IT + K+ + + +
Sbjct: 555 PRRASTGPRPRPTF--QLTEIDSPNRRRASDCITPSISKILKMVSE 598
>SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 405 PAPAPRAHPALSPTERSPAKAGLHVNFSDKGEVKERREKFLTAKYGSHQMAL 560
P P P + + +P RS + + VN +GE+ + F+ + + AL
Sbjct: 37 PPPFPSTNASYAPVIRSCDSSEIMVNSLPRGELPDLENDFIEKRLSNANEAL 88
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 617 VELXQLVVEPHLDRESLA 564
+EL + VVEPHL S+A
Sbjct: 24 IELGESVVEPHLSNNSIA 41
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 405 PAPAPRAHPALSPTERSPAKA 467
P P P++HP ++ SPA+A
Sbjct: 113 PPPQPQSHPNVTVISASPARA 133
>SPAC12B10.16c |mug157||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = -2
Query: 297 PTITLRAPRPHYPSTGPAPRPHYARPLRQPWDGSQRHHCDSITSELQKMFQRLD 136
P + R HYP+TGP P ++P + H S+ ++ + ++L+
Sbjct: 28 PNYKTYSGRRHYPATGP-----LRLPFQRPATSCRTFHSKSVEQTIEDVKEQLE 76
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 426 HPALSPTERSPAKAGLHVNFSDKGEVKERREKF 524
HP+ +R K +H++F D EV REKF
Sbjct: 2139 HPSNLMMDRYSGKI-IHIDFGDCFEVAMHREKF 2170
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,925,146
Number of Sequences: 5004
Number of extensions: 33728
Number of successful extensions: 107
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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